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Oryza sativa
cluster # 10464 cluster # 10464       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10464#0 length = 2215 sequences # 7  

consensusID : consensus_10464#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2215
fasta sequence
                              [GGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCCCGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGTGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCTCAAGTGTATCCTAAGTTGAATAAGATCCTTTTCCTGGATGATGACATAGTTGTTCAGAAGGATTTGACAAGTACCTCAATTTTTCAAATCCAAATATT-GCTCAGAACTTCGATCCTAATGCTTGTGGCTGGG-CGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068531             [GGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCCCGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCAGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGCTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAGCAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGTGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTGAAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTGAATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTGGTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGATTCTACCTTCCTCAAGTGTATCCTAAGTTGAATAAGATCCTTTTCCTGGATGATGACATAGTTGTTCAGAAGGATTTGACAAGTACCTCAATTTTTCAAATCCAAATATT GCTCAGAACTTCGATCCTAATGCTTGTGGCTGGG CGTATGGAATGAATATGTTTGATTTGGAAGAATGGAAGAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGT                            ]
[+] EMBL AU093295             [                                                   CCGACATCCCGGAGCGGATCGCGGA  GCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTNAGCTAGATTGGGCCGGGAATNGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAANAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF305782             [                                                                                                                   ATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTTCCCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACATGTACTGGACTGGAGTATTCAAGCCACCATTAAACTACAGAATCTCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF305826             [                                                                                                                   ATCTACCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF303948             [                                                                                                                                                                      GATTTTGAGCTAGATTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCGCCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTACTGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATGGACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCAGAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGAATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATATGGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAATGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATCANGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL OSC24851             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CAGTCAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGCGGCGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACCTTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTTATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCATCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACTTTGGNGCAATGAACATGTGGTTTTTGTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL C97574               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAAATCCAAATTTTGGCTCAGAACTTCGATCCTAATGCTTGTGGCTGGGNCGTATGGAATGAATATGTTTGATTTGGAAGATTGGAAGAAG AGGACATTACTGGCATTTATCAC AATGGCAGAACATG ATGAAAACAGGCTGCTCTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCTGGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAATAGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAATGTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGGGTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATGAATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAACAGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCTTATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTGGTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTCACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAAAAAAAAAAAAAAAAAA]


>consensus_10464#0 GGCACACTCGCAGTCCCCACTCCAAAAGCCGGAGGAGGAGGAGGCGATTCACCGACATCC CGGAGCGGATCGCGGAGCGCGACCCCTCCTCCCTCCGCCACCGCCGCCGCCGCCGATCTA CCTCCGCCGCCGCGCCCTCCCCTCGCCGTGCGTGGCTGGTCTCGTGGATTTTGAGCTAGA TTGGGCCGGGAATGGCGGGGGCTCGCGCGATGGCTTTCGTCGCGCTCTGCGCCCTCGCCG CCTTCCCTGTCGCCGTCACCGGAGCCCAAGTGGACCCACTTTATTCTAGTAAACAGGTAC TGGACTGGAGTAGTCAAGCCAACATTAAACTACAGAATTTCTCCTTAACTGAAGAAGATG GACTTCAGCTGCTGGTAAGACCAGAAGAAGTAACTCACAGGAAATTGCGGGAGAGAACCA GAATAAAGAAGAAGATTGAACCAGTACAGCAGGATGATGAAGCACTAGTTAAGCTTGAGA ATGCTGGAATTGAACGTTCAAAAGCCGTTGATTCGGCTGTCCTTGGAAAATATAGCATAT GGAGGCGTGAGAATGAAAATGAAAAAGCAGATTCAAAGGTTCGTCTGATGCGTGATCAAA TGATCATGGCCAGAATATATTCTGTGCTTGCCAAATCCAGGGACAAGCTCGATCTTCATC AGGATCTACTTTCCAGGCTTAAGGAAAGCCAGCGCTCCCTTGGGGAAGCTACTGCTGATG CTGAACTTCCCAAGAGTGCTTCTGAGAGAGTCAAAGTAATGGGCCAGTTACTAGCAAAAG CAAGAGATCAATTATATGATTGCAAGGCAATTACTCAGCGGTTAAGAGCGATGCTTCAGT CAGCTGATGAGCAGGTCAGGAGCTTAAAGAAGCAGAGCACCTTCCTAAGCCAGTTAGTGG CGAAGACAATCCCAAATGGCATCCATTGCCTGTCCATGCGGCTAACGATAGACTATTACC TTCTCTCCCCAGAGAAAAGAAAGTTTCCGAAGAGTGAGAACTTAGAAAATCCTGATCTTT ATCACTATGCCCTTTTTTCGGACAATGTTTTGGCAGCTTCAGTTGTGGTGAACTCAACCA TCATGAATGCAAAGGAGCCTGAGAAACATGTATTCCATCTTGTTACTGACAAGCTGAACT TTGGAGCAATGAACATGTGGTTTTTGTTGAATCCACCTGGAGATGCGACAATCCATGTTG AAAACGTGGATGACTTCAAATGGCTGAACTCTTCATATTGCCCTGTTCTGAAGCAGCTTG AATCTGTGGCCATGAAAGAGTACTATTTTAAGGCAGACCGTCCAAAAACTCTCTCTGCTG GTTCTTCTAATCTGAAATATAGGAACCCCAAATATCTTTCCATGCTCAACCATTTAAGAT TCTACCTTCCTCAAGTGTATCCTAAGTTGAATAAGATCCTTTTCCTGGATGATGACATAG TTGTTCAGAAGGATTTGACAAGTACCTCAATTTTTCAAATCCAAATATTGCTCAGAACTT CGATCCTAATGCTTGTGGCTGGGCGTATGGAATGAATATGTTTGATTTGGAAGAATGGAA GAAGAAGGACATTACTGGCATTTATCACAAATGGCAGAACATGAATGAAAACAGGCTGCT CTGGAAGCTTGGGACACTGCCGCCAGGTCTCCTAACATTCTACAAGTTAACACATCCCCT GGACAAATCATGGCATGTTCTTGGCTTAGGGTACAACCCATCCATCGAGCGCTCAGAAAT AGATAACGCCGCCGTCATCCACTACAACGGGAACATGAAGCCATGGCTGGAGATTGCAAT GTCGAAGTACCGACCATACTGGACAAAGTACATCAACTACGAGCACACCTATGTTCGTGG GTGCAAGATCAGTCAATAGGCTTTTTTTTTTCCTGGAGTGATTTCATTCTTTCAGTGATG AATAGCTAGTGGGACTTGGAACCAAGCCCCCTTGTTAGACTTCGATATAGTAGGAACAAC AGTAATTCCATTGCATGTTCAGATGTTCTTTGTTCGTGTTGCTACTTGCTATAGGTATCT TATGTATGTAGTTGCCTCCCACATTCGTTTTCTAGCCCCCCTTTCCATTAGCCCTCTGTG GTATCTGTAACCATCTTTTCTTTTCTTCAGAAAAGAATGATGAACCCTGTGATTGTTCTC ACCTGATAAATGAAATGTCTCAAAAGTTTGTGTGGCTAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)