These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10476#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 992 fasta sequence [CACCCAGCAGGTTCGCCG-CACCATGGCGTCCGCCCGCGCCGCGCTCCTCCGCCGCCACTGCCTCGCCGGAGCCGGCGGCGCCAACCCCGTGCTCTTCTCCGGCCATGGCCTCCGCTACCGCAAGCTGGAGGTCATCCTCACCACGACGATTGATAAGCTGGGGAAAGCGGGGGAGGTAGTGAAGGTGGCCCCAGGACACTTCCGCAACCACCTTATGCCCAAGATGCTCGCTGTCCCAAACATTGACAAATTCGCTCTACTCATCCATGAGCAGCGCAAGCTTTACCAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGACAAGAAGATGATGATGCTAAGCAACAGGAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGTGTCTTGATAATGCTCTCTTGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTGCGGTCTCCTGTGACAAAGGACGAAATTGTTTCCGAGGTTGCAAGGCAACTCAATATCAATATCCACCCAGACAATCTTCACCTGCCGTCACCATTGGCATCCCTTGGGGAGTTTGAGCTGCCCCTCCGTTTGCCAAGGGATATACCACGCCCAGAAGGCAAGCTACAATGGACTCTAACGGTTAAGATCAGAAGAAAATAAGTACAATCCATGGGGTAACTTTGTTCCCCCTCCAAGGAGGTGAATGATACGAAAACGTTGCAGAATTCAGAGCAAGAGACTTCAGATAAGGTTTGCTGCAAAATTCAGTCCCATTTTGAAAATGGTGGACTGCATTCTGCGGTGTGGTTTTTCGAACCTGCTTATAGACATTCTTGGCCTTTCCTTGAGAGGATGATCGGTACTAGCCATTTTCATTCGTGAATACTGAATAATCTTTCTGGAATAGATATGTTGCAACAGTTTTTAGCAGCCAGACAGCATGGCCTGTGTATTGTCTACAACGTCGTATTTTGTTAATTTAGTATATCCGTTGCCTATGCAAGCATAG] [+] EMBL CA758481 [CACCCAGCAGGTTCGCCG CACCATGGCGTCCGCCCGCGCCGCGCTCCTCCGCCGCCACTGCCTCGCCGGAGCCGGCGGCGCCAACCCCGTGCTCTTCTCCGGCCATGGCCTCCGCTACCGCAAGCTGGAGGTCATCCTCACCACGACGATTGATAAGCTGGGGAAAGCGGGGGAGGTAGTGAAGGTGGCCCCAGGACACTTCCGCAACCACCTTATGCCCAAGATGCTCGCTGTCCCAAACATTGACAAATTCGCTCTACTCATCCGTGAGCAGCGCAAGCTTTA CAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGACCAGAAGATGATGATGCTAA A GAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGCGTCTTGATAAGGCTCTCTCGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTACGGTCTTCTGTGACAAAGGACGAAAATGTTTCCGAGGTTGCCAGGCACCTCAATATCAATATTCACCCAGACAATCNTTACCTGCCGGCACCAAGGGCATCCCTTGGGGAAGTTGAGC ] [+] EMBL BE040800 [CACCCAGCAGGTTCGCCG CACCATGGCGTCCGCCCGCGCCGCGCTCCTCCGCCGCCACTGCCTCGCCGGAGCCGGCGGCGCCAACCCCGTGCTCTTCTCCGGCCATGGCCTCCGCTACCGCAAGCTGGAGGTCATCCTCACCACGACGATTGATAAGCTGGGGAAAGCGGGGGAGGTAGTGAAGGTGGCCCCAGGACACTTCCGCAACCACCTTATGCCCAAGATGCTCGCTGTCCCAAACATTGACAAATTCGCTCTACTCATCCGTGAGCAGCGCAAGCTTTA CAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGACCAGAAGATGATGATGCTA AGGAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGCGTCTTGATAAGGCTCTCTCGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTACGGTCTTCTGTGACAAAGGACGAAAATGTTTCCGAGGTTGCCAGGCACCTCAATATCAATATTCACCCAGACAATCNTTACCTGCCGGCACCAAGGGCATCCCTTGGGGAAGTTGAGC ] [+] EMBL AK072642 [ GGTTCGCCGTCGCCATGGCGTCCGCCCGCGCCGCGCTCCTCCGCCGCCACTGCCTCGCCGCAGCCGGCGGCGCCAACCCCGTGCTCTTCTCCGGCCATGGCCTCCGCTACCGCAAGCTGGAGGTCATCCTCACCACGACGATTGATAAGCTGGGGAAAGCGGGGGAGGTAGTGAAGGTGGCCCCAGGACACTTCCGCAACCACCTTATGCCCAAGATGCTCGCTGTCCCAAACATTGACAAATTCGCTCTACTCATCCATGAGCAGCGCAAGCTTTACCAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGACAAGAAGATGATGATGCTAAGCAACAGGAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGTGTCTTGATAATGCTCTCTTGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTGCGGTCTCCTGTGACAAAGGACGAAATTGTTTCCGAGGTTGCAAGGCAACTCAATATCAATATCCACCCAGACAATCTTCACCTGCCGTCACCATTGGCATCCCTTGGGGAGTTTGAGCTGCCCCTCCGTTTGCCAAGGGATATACCACGCCCAGAAGGCAAGCTACAATGGACTCTAACGGTTAAGATCAGAAGAAAATAAGTACAATCCATGGGGTAACTTTGTTCCCCCTCCAAGGAGGTGAATGATACGAAAACGTTGCAGAATTCAGAGCAAGAGACTTCAGATAAGGTTTGCTGCAAAATTCAGTCCCATTTTGAAAATGGTGGACTGCATTCTGCGGTGTGGTTTTTCGAACCTGCTTATAGACATTCTTGGCCTTTCCTTGAGAGGATGATCGGTACTAGCCATTTTCATTCGTGAATACTGAATAATCTTTCTGGAATAGATATGTTGCAACAGTTTTTAGCAGCCAGACAGCATGGCCTGTGTATTGTCTACAACGTC ] [+] EMBL AK099090 [ CGCCGTCGCCATGGCGTCCGCCCGCGCCGCGCTCCTCCGCCGCCACTGCCTCGCCGCAGCCGGCGGCGCCAACCCCGTGCTCTTCTCCGGCCATGGCCTCCGCTACCGCAAGCTGGAGGTCATCCTCACCACGACGATTGATAAGCTGGGGAAAGCGGGGGAGGTAGTGAAGGTGGCCCCAGGACACTTCCGCAACCACCTTATGCCCAAGATGCTCGCTGTCCCAAACATTGACAAATTCGCTCTACTCATCCATGAGCAGCGCAAGCTTTACCAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGGCAAGAAGATGATGATGCTAAGCAACAGGAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGTGTCTTGATAATGCTCTCTTGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTGCGGTCTCCTGTGACAAAGGACGAAATTGTTTCCGAGGTTGCAAGGCAACTCAATATCAATATCCACCCAGACAATCTTCACCTGCCGTCACCATTGGCATCCCTTGGGGAGTTTGAGCTGCCCCTCCGTTTGCCAAGGGATATACCACGCCCAGAAGGCAAGCTACAATGGACTCTAACGGTTAAGATCAGGAGAAAATAAGTACAATCCATGGGGTAACTTTGTTCCCCCTCCAAGGAGGTGAATGATACGAAAACGTTGCAGAATTCAGAGCAAGAGACTTCAGATAAGGTTTGCTACAAAATTCAGTCCCATTTTGAAAATGGTGGACTGCATTCTGCGGTGTGGTTTTTCGAACCTGCTTATAGACATTCTTGGCCTTTCCTTGAGAGGATGATCGGTACTAGCCATTTTCATTCGTGAATACTGAATAATCTTTCTGGAATAGATATGTTGCAAC ] [+] EMBL CA999501 [ ACTCATCCATGAGCAGCGCAAGCTTTACCAACGTCAAGAGGAGGAGGTGGTGAAAGAAGTCCGACAAGAAGATGATGATGCTAAGCAACAGGAAGAGAAACTGAAGGAGTATCAAACGGCAGCAAAGTGTCTTGATAATGCTCTCTTGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTGCGGTCTCCTGTGACAAAGGACGAAATTGTTTCCGAGGTTGCAAGGCAACTCAATATCAATATCCACCCAGACAATCTT ] [+] EMBL CF317105 [ AGCAAAGTGTCTTGATAATGCTCTCTTGGTGTTGAGGAGATTCATCTCAGTTGGGAATGAACTGCGGTCTCCTGTGACAAAGGACGAAATTGTTTCCGAGGTTGCAAGGCAACTCAATATCAATATCCACCCAGACAATCTTCACCTGCCGTCACCATTGGCATCCCTTGGGGAGTTTGAGCTGCCCCTCCGTTTGCCAAGGGATATACCACGCCCAGAAGGCAAGCTACAATGGACTCTAACGGTTAAGATCAGAAGAAGATAAGTACAATCCATGGGGTAACTTTGTTCCCCCTCCAAGGAGGTGAATGATACGAAAACGTTGCAGAATTCAGAGCAAGAGACTTCAGATAAGGTTTGCTGCAAAATTCAGTCCCATTTTGAAAATGGTGGACTG ] [+] EMBL D43241 [ GATCAGAAGAAAATAAGTACAATCCATGGGGTAACTTTGTTCCCCCTCCAAGGAGGTGAATGATACGAAAACGTTGCAGAATTCAGAGCAAGAGACTTCAGATAAGGTTTGCTGCAAAATTCAGTCCCATTTTGAAAATGGTGGACTGCATTCTGCGGTGTGGTTTTTCGAACCTGCTTATAGACATTCTTGGCCTTTCCTTGAGAGGATGATCGGTACTAGCCATTTTCATTCGTGAATACTGAATAATCTTTCTGGAATAGATATGTTGCAACAGTTTTTAGCAGCCAGACAGCATGGCCTGTGTATTGTCTACAACGTCGTATTTTGTTAATTTAGTATATCCGTTGCCTATGCAAGCATAG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||