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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10487#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 983 fasta sequence
[CCGCGAGCGAGAACGAACGACGAACAGACGCTACCCACGCCAGCGTCGAGTCGAGTCGTGCACCTCGTCTCGTGCTGCTCCATGGCGTCCTCGCCTTTCGCCGCCGCCGTCCAGGGCGGCCTCGCGCTCCGGCCCGTCGCGCCGCGGCGGTTGTCGTCGACGTCGAGCGACGTGGCGCGGAGCGGCGGCGTGGCGGCGTGGCGTGCTCCGCGGCGGCGGAGGGTGGCGGCGGTGGGTGACCTGCGCCCGGCCATCGACGAGTACCCGGAGGGGATCCTCTCCGGCGAGTGGCCGGAGAAC-TTCTCCCTCCTCAGCTAC-GCCGACC-TCC--GCGCCTACCTCG-AGTCGCAGA-TCGTCACC-ACCGACCAGATGA-GCCCGACGGCGAAGC-TCGGGG-AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAGAGGCTGGCGGACATCGACGCCT-TCT-TCGCCG-CGCAGTCCGGCCTGCCGGTGCTCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGAAGGACAAGG-CCAAGGCATCCAATGGGTTGGACT-CAACTGTTGGAGAAGTCATGTCATCTCCTGCTATAACTCTGACACCCGAGAAGACTGTATTGGAAGCTGCTGCTCTTATGCT-CAAGGAGAAGGTTCACAGGATACCAGTCGTGAATGAACAACAGCAAGTGATCGGGATCGTCACTCGCACGGACGTA-TTCAAGGCTTTGGAGGCCAGCAAGGTGTAGTAAGATCCCAGTTAATAATAATCAGTAAATAAACATGCTCCTTGTGTAGATATCGATGCCTTCGTAGGCTGTCGGGGCGTTGCTCTTGTACATTAATTCTAGCTGTAAAATCTGGAAGTGCTCAAGCCTTTCTATGTACTACTCATGTGTCATGTTTCTGAACAAGTACCTTAGGGTGCTGGGGTTTGTGATCTTCGTTAGTTGGTTGCTGAACGCTCAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK066843 [CCGCGAGCGAGAACGAACGACGAACAGACGCTACCCACGCCAGCGTCGAGTCGAGTCGTGCACCTCGTCTCGTGCTGCTCCATGGCGTCCTCGCCTTTCGCCGCCGCCGTCCAGGGCGGCCTCGCGCTCCGGCCCGTCGCGCCGCGGCGGTTGTCGTCGACGTCGAGCGACGTGGCGCGGAGCGGCGGCGTGGCGGCGTGGCGTGCTCCGCGGCGGCGGAGGGTGGCGGCGGTGGGTGACCTGCGCCCGGCCATCGACGAGTACCCGGAGGGGATCCTCTCCGGCGAGTGGCCGGAGAAC TTCTCCCTCCTCAGCTAC GCCGACC TCC GCGCCTACCTCG AGTCGCAGA TCGTCACC ACCGACCAGATGA GCCCGACGGCGAAGC TCGGGG AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAGAGGCTGGCGGACATCGACGCCT TCT TCGCCG CGCAGTCCGGCCTGCCGGTGCTCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGAAGGACAAGG CCAAGGCATCCAATGGGTTGGACT CAACTGTTGGAGAAGTCATGTCATCTCCTGCTATAACTCTGACACCCGAGAAGACTGTATTGGAAGCTGCTGCTCTTATGCT CAAGGAGAAGGTTCACAGGATACCAGTCGTGAATGAACAACAGCAAGTGATCGGGATCGTCACTCGCACGGACGTA TTCAAGGCTTTGGAGGCCAGCAAGGTGTAGTAAGATCCCAGTTAATAATAATCAGTAAATAAACATGCTCCTTGTGTAGATATCGATGCCTTCGTAGGCTGTCGGGGCGTTGCTCTTGTACATTAATTCTAGCTGTAAAATCTGGAAGTGCTCAAGCCTTTCTATGTACTACTCATGTGTCATGTTTCTGAACAAGTACCTTAGGGTGCTGGGGTTTGTGATCTTCGTTAG ]
[+] EMBL AU181592 [ GTCGTGCACCTCGTCTCGTGCTGCTCCATGGCGTCCTCGCCTTTCGCCGCCGCCGTCCAGGGCGGCCTCGCGCTCCGGCCCGTCGCGCCGCGGCGGTTGTCGTCGACGTCGAGCGACGTGGCGCGGAGCGGCGGCGTGGCGGCGTGGCGTGCTCCGCGGCGGCGGAGGGTGGCGGCGGTGGGTGACCTGCGCCCGGCCATCGACGAGTACCCGGAGGGGATCCTCTCCGGCGAGTGGCCGGAGAAC TTCTCCCTCCTCAGCTAC GCCGACC TCC GCGCCTACCTCG AGTCGCAGA TCGTCACC ACCGACCAGATGA GCCCGACGGCGAAGC TCGGGG AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCANAGGCTGGCGGACATCGACGCCT TCT TCGCCGng ]
[+] EMBL CF326160 [ TCCGGCGAGTGGCCGGAGAAC TTCTCCCTCCTCAGCTAC GCCGACC TCC GCGCCTACCTCG AGTCGCAGA TCGTCACC ACCGACCAGATGA GCCCGACGGCGAAGC TCGGGG AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAGAGGCTGGCGGACATCGACGCCT TCT TCGCCG CGCAGTCCGGCCTGCCGGTGCTCG ]
[+] EMBL AU063439 [ CCGGCGAGTGG CNNANANCNTTCTCCCTCCTCAGCTAC GCCGACC TCC GCGCCTACCTCG AGTCGCAGA TCGTCACC ACCGACCAGATGA GCCCGACGGCANAG TCGGGGNAGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAGAGGCTGGCGGACATCGACGCCTCTCT TCGCCG CGCAGTCCGGCCTGCCTNGNCTCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGAAGGACAAGG CCAAGGCATCCAATGGGTTGGACT CAACTGTTGGAGAAGTCATGTCATCTCCTGCTATAACTCTGACANCCGAGAAGACTGTATTGGAAGCTGCTGCTCTTATGCT CAAGGAGAAGGTTCACAGGATACCAGTCGTGAATGAACAACAGCAAGTGATCGGGATCGTCANTNGCACGGACGTATTTCAAGGTTTTGGAGG CAGCAA GTTTAGTAAGAT CCAGTTAAT ATTATCAGT AATTAACATG TTCTTGTGTAGgt ]
[+] EMBL AU063353 [ CCGGCGAGTGGCCGGAGAAC TTCTCCCTCCTCAGCTAC GCCGACC TCC GCGCCTACCTCG AGTCGCAGA TCGTCACC ACCGACCAGATGA GCCCGACGGCGAAG TCGGGG AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAGAGGCTGGCGGACATCGACGNCT TCT TCGCCG CGCAGTCCGGCCTGCCGGTGCTCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGAAGGACAAGG CCAAGGCATCCAATGGGTTGGACT CAACTGTTGGAGAAGTCATGTCATCTCCTGCTATAACTCTGACAACCGAGAAGACTGTATTGGAAGTTGTTG TCTTATGCT CAAGGAGAAGG TCACAGGATACCAGTCGTGAATG ACAACAG AAGTGATCGGGATCGTNAAT GGAAGGACGTA TTCAAGGTTTT ]
[+] EMBL AU091810 [ TACGGCCGACCTTCCGGGGGCTTACNTCGAATTCGCAGATTGGTCACCNGCGGACCAGATGAGGCCCGACGGCGAAGCTTCGGGG AGGTCATGTCGCGGCTCGTGCAGGTGGCCATGGCGGACCAAAGGCTGGCGGACATCGACGCCT TNT TCGCCG CGCAGTCCGGCCTGCCGGTGCNCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGAAGGACAAGG CCAAGGCATCCAATGGGTTGGACT CAACTGTTGGAGAAGTCATGTCATCTCCTGCTATAACTNTGACACCCGAGAAGACTGTATTGGAAGCTGCTGNTCTTATGCT CAAGGANAAGGTTCACAGGATACCAGTCGTGAATGAACAACAGCAAGTGATCGGGATCGTCACTCGCACGGACGTA TTCAAGGCTTTGGAGGCCAGCAAGGTGTAGTAAGATCCCAGTTAATAATAATCAGTAAATAAACATGCTCCTTGTGTAGATATCGATGCCTTCGTAGGCTGTCGGGGCGTTGCTCTTGTACATTAATTCTAGCTGTAAAATCTGGAAGTGCTCAAGCCTTTCTATGTACTACTCATGTGTCATGTTTCTGAACAAGTACCTTAGGGTGCTGGGGTTTGTGATCTTCGTTAGTTGGTTGCTGAACGCTCAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU092936 [ GACGCCT TCTNCCGCCGCCGCAGTCCGNCCTGCCGGTGCTCGACGAGGAGGGGAGGTGCATCGGCGTCATCTCCAAGANGGACAAGGCCCAAGGCATCCAATGGGTTGGACTCCAACTGTTGGAGAAGTCATGTCATCTCCTGCTATNACTCTGACACCCGAGAAGACTGTATTGGAAGCTGCTGCTCTTATGCTCCAAGGNGAAGGTTCNCAGGATACCAGTCGTGAATGAACAACAGCAAGTGATCGGGATCGTNACTCGCACGGACGTA TTCAAGGCTTTGGAGGCCAGCAAGGTGTAGTAAGATCCCAGTTAATAATAATCAGTAAATAAACATGCTCCTTGTGTAGATATCGATGCCTTCGTAGGCTGTCGGGGCGTTGCTCTTGTACATTAATTCTAGCTGTAAAATCTGGAAGTGCTCAAGCCTTTCTATGTACTACTCATGTGTCATGTTTCTGAACAAGTACCTTAGGGTGCTGGGGTTTGTGATCTTCGTTAGTTGGTTGCTGAACGCTCAAAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||