These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10507#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1510 fasta sequence [CTCCTGTCTTGCACAGCCGCGAGCCCCTGAAACGGGGAGGATAGAGCAGTGCTCATCGATGGATGAACGGTTAAGATGGAATCAACCGGGGGCCATCGCAGGTTGATCCGGATCCCTCCGCGGCTCCGCCGAATATCCGCCGCGCTGCTGCCTGCTGCCTGCTGTTGCTGCTATCCATCCTCTCCTCTCCACCTCGCTTCCGCTCGTTCGTTCCTCTTCCCCCTCACCCACCTGGTCGCCACCCCCCAACCCCACCGGCGTCCGAGCCCGCTCCGCTCCGGCCTCCTCCTGCGAGGCCATCGATATAGCTAACCGTAGTGGAAGATAAAGGACATGAAAATGGCACATATGGTAACTAACTGTAGTTTCAGCCCTTCGCCTGCAGTTAAGACGTACTCGAAATCTCCTGGTTATTGCTGCAATGTGACCCAATTCCAGAGCTCAAAATGTTCCAATCTAGTGCTCAAATCATGTACTGCGACAAGACCGAACAGGCCATTTGTCGCTCGTGCTAGCGCTGCTGTACAAGGACAGACACAAACACCCCTTACTGGAAGTCAGCAAGCATCTGGGCACTCATCCTCTAAACCCAAAAAGGTCATGGTTATCGGCGGAGATGGCTACTGCGGCTGGGCAACCGCACTTCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCGGATTCTGCTGTCCACTTTGGTGAGCAGAGATCAGCGCCATATTCTATGATTGATCGTTCCCGTGCGGTATTCACTCAGCATAACAATGTTATCGGAACTCTTAATGTATTATTTGCCATTAAGGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATTGAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAGCAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACATGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGAACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGC-GTCTTTGGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTATGGAAAAGGTGGTCAGACCCGTGGATATCTGGACATCAGGGATACAGTGCAATGCGTAGAGCTCGCAATCGCCAACCCAGCCAAACCAGGTGAGTTCAGGGTCTTCAACCAGTTCACCGAGCAGTTCTCGGTCAACGAGCTGGCAAAGCTGGTTA] [+] EMBL AK065310 [CTCCTGTCTTGCACAGCCGCGAGCCCCTGAAACGGGGAGGATAGAGCAGTGCTCATCGATGGATGAACGGTTAAGATGGAATCAACCGGGGGCCATCGCAGGTTGATCCGGATCCCTCCGCGGCTCCGCCGAATATCCGCCGCGCTGCTGCCTGCTGCCTGCTGTTGCTGCTATCCATCCTCTCCTCTCCACCTCGCTTCCGCTCGTTCGTTCCTCTTCCCCCTCACCCACCTGGTCGCCACCCCCCAACCCCACCGGCGTCTGAGCCCGCTCCGCTCCGGCCTCCTCCTGCGAGGCCATCGATATAGCTAACCGTAGTGGAAGATAAAGGACATGAAAATGGCACATATGGTAACTAACTGTAGTTTCAGCCCTTCGCCTGCAGTTAAGACGTACTCGAAATCTCCTGGTTATTGCTGCAATGTGACCCAATTCCAGAGCTCAAAATGTTCCAATCTAGTGCTCAAATCATGTACTGCGACAAGACCGAACAGGCCATTTGTCGCTCGTGCTAGCGCTGCTGTACAAGGACAGACACAAACACCCCTTACTGGAAGTCAGCAAGCATCTGGGCACTCATCCTCTAAACCCAAAAAGGTCATGGTTATCGGCGGAGATGGCTACTGCGGCTGGGCAACCGCACTTCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCGGATTCTGCTGTCCACTTTGGTGAGCAGAGATCAGCGCCATATTCTATGATTGATCGTTCCCGTGCGGTATTCACTCAGCATAACAATGTTATCGGAACTCTTAATGTATTATTTGCCATTAAGGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATTGAAGAAGGGTTCATCACTATTACCCACAATGGGAGAACTGATACCTTGCCTTACCCAAAGCAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACATGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGAACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGC GTCTTTGGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTATGGAAAAGGTGGTCAGACCCGTGGATATCTGGACATCAGGGATACAGTGCAATGCGTAGAGCTCGCAATCGCCAACCCAGCCAAACCAGGTGAGTTCAGGGTCTTCAACCAGTTCACCGAGCAGTTCTCGGTCAACGAGCTGGCAAAGCTGGTTA] [+] EMBL AK060744 [ TCCTGTCTTGCACAGCCGCGAGCCCCTGAAACCGGGAGGATAGAGCAGTGCTCATCGATGGATGAACGGTTAAGATGGAATCAACCGGGGGCCATCGCAGGTTGATCCGGATCCCTCCGCGGCTCCGCCGAATATCCGCCGCGCTGCTGCCTGCTGCCTGCTGTTGCTGCTATCCATCCTCTCCTCTCCACCTCGCTTCCGCTCGTTCGTTCCTCTTCCCCCTCACCCACCTGGTCGCCACCCCCCAACCCCACCGGCGTCCGAGCCCGCTCCGCTCCGGCCTCCTCCTGCGAGGCCATCGATATAGCTAACCGTAGTGGAAGATAAAGGACATGAAAATGGCACATATGGTAACTAACTGTAGTTTCAGCCCTTCGCCTGCAGTTAAGACGTACTCGAAATCTCCTGGTTATTGCTGCAATGTGACCCAATTCCAGAGCTCAAAATGTTCCAATCTAGTGCTCAAATCATGTACTGCGACAAGACCGAACAGGCCATTTGTCGCTCGTGCTAGCGCTGCTGTACAAGGACAGACACAAACACCCCTTACTGGAAGTCAGCAAGCATCTGGGCACTCATCCTCTAAACCCAAAAAGGTCATGGTTATCGGCGGAGATGGCTACTGCGGCTGGGCAACCGCACATCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCGGATTCTGCTGTCCACTTTGGTGAGCAGAGATCAGCGCCATATTCTATGATTGATCGTTCCCGTGCGGTATTCACTCAGCATAACAATGTTATCGGAACTCTTAATGTATTATTTGCCATTAAGGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATTGAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAGCAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACATGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGAACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGC GTCTTTGGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTATGGAAAAGGTGGTCAGACCCGTGGATATCTGGACATCAGGGATACAGTGCAATGCGTAGAGCTCGCAATCGCCAACCCAGCCAAACCAGGTGAGTTCAGGGTCTTCAACCAGTTCACCGAGCAGTTCTCGGTCAACGAGCTGGCAAAGCTGGTTA] [+] EMBL CB682801 [ ATGAACGGTTAAGATGGAATCAACCGGGGGCCATCGCAGGTTGATCCGGATCCCTCCGCGGCTCCGCCGAATATCCGCCGCGCTGCTGCCTGCTGCCTGCTGTTGCTGCTATCCATCCTCTCCTCTCCACCTCGCTTCCGCTCGTTCGTTCCTCTTCCCCCTCACCCACCTGGTCGCCACCCCCCAACCCCACCGGCGTCCGAGCCCGCTCCGCTCCGGCCTCCTCCTGCGAGGCCATCGATATAGCTAACCGTAGTGGAAGATAAAGGACATGAAAATGGCACATATGGTAACTAACTGTAGTTTCAGCCCTTCGCCTGCAGTTAAGACGTACTCGAAATCTCCTGGTTATTGCTGCAATGTGACCCAATTCCAGAGCTCAAAATGTTCCAATCTAGTGCTCAAATCATGTACTGCGACAAGACCGAACAGGCCATTTGTCGCTCGTGCTAGCGCTGCTGTACAAGGACAGACACAAACACCCCTTACTGGAAGTCAGCAAGCATCTGGGCACTCATCCTCTAAACCCAAAAAGGTCATGGTTATCGGCGGAGATGGCTACTGCGGCTGGGCAACCGCACTTCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCG ] [+] EMBL C72656 [ CTCGCTTCCGCTCGTTCGTTCCTCTTCCCCCTCACCCACCTGGTCGCCACCCCCCAACCCCACCGGCGTCCGAGNCCGCTCCGCTCCGGNNTCCTCCTGCGANGNCATCGATATAGCTAACCGTAGTGGAAGATAAAGGACATGAAAATGGCACATATGGTAACTAACTGTAGTTTCAGCCCTTCGCCTGCAGTTAAGACGTACTCGAAATCTCCTGGTTATTGCTGCAATGTGACCCAATTCCAGAGCTCAAAATGTTCCAATCTAGTGCTCAAATCATGTACTGCGACANGACCGAACAGGCCATTTGTCGCTCGTGCTAACGC ] [+] EMBL CA758712 [ CCCCTTACTGGAAGTCAGCAAGCATCTGGGCACTCATCCTCTAAACCCAAAAAGGTCATGGTTATCGGTGGAGATGGCTACTGCGGCTGGGCAACCGCACTTCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCGGATTCTGCTGTCCACTTTGGTGAGCAGAGATCAGCGCCATATTCTATGATTGATCGTTCCCGTGCGGTATTCACTCAGCATAACAATGTTATCGGAACTCTTAATGTATTATTTGCCATTAAGGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATTGAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAGCAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACATGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGAACAGATGAAACTGCAATGCATGAAGAACTATCCCACAGGTTTGATTATGATGGC GTCTTTGGGACAGCACTGAATAGGTTCTGTGTTCAGGCTGCTGTAGGTCATCCACTTACAGTTTATGGAAAAGGTGGTCAGACCCGTGGATATCTGNACATCAGGGATACCGTGCAATGCGT ] [+] EMBL CB645458 [ TGCGGCTGGGCAACCGCGCTTCATCTCTCCAATAAAGGATACGAGGTTGCCATTGTTGACAATCTTGTGCGGCGCCTTTTTGATCACCAACTTGGCCTGGATTCCCTCACACCCATAGCCTCCATCCAGAATCGCATCCGTCGGTGGAAGGCTCTAACCGGAAAGACGATTCAGCTCTATGTTGGTGATATATGTGACTTTGATTTCCTTTCAGAAGCCTTCAAGTCTTTCGAGCCGGATTCTGCTGTCCACTTTGGCGACCAGAGATCAGCGCCATATTCTATGATTGATCGTTCCCGTGCGGGATTCACTCAGCATAACAATGTTATCGGAACTCTTAATGTATTATTTGCCATTAACGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCg ] [+] EMBL OSS11178A [ GCCATTAAGGAGTTCAGTGAAGAATGCCATCTGGTCAAACTAGGAACCATGGGTGAGTATGGAACTCCAAATATTGACATTGAAGAAGGGTTCATCACTATTACCCACAATGGAAGAACTGATACCTTGCCTTACCCAAAGCAAGCGAGCTCCTTCTACCATCTAAGCAAAGTGCATGACTCGCACAATATAGCATTTACATGCAAGGCTTGGGGTATAAGGGCCACGGATCTTAACCAAGGTGTTGTATATGGAGTGAGAACAGATGAAACTGCAATGCATGAAGAACTATCCAACAGGTTTGATTATGATGGCGGCCTTTGGGNCAGCACTGNATAGGTTCTGTG TCAGGNTGTTGTAGGTCATCCACTTACAGTTTATGGAAAAGGTGGNCAGACCCGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||