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Oryza sativa
cluster # 10511 cluster # 10511       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10511#0 length = 854 sequences # 7  

consensusID : consensus_10511#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 854
fasta sequence
                              [TTTCACTCATTCCAAGGCAACGAGCTGGAGCTCTCCTCCTCCAATGTATCTATCTATCTCTAGCCCAAGATATATCTGGCTTGCCATTCTCATAGCTTGCCAGTTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG-ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGAGGCAG]

[+] EMBL CB661806             [TTTCACTCATTCCAAGGCAACGAGCTGGAGCTCTCCTCCTCCAATGTATCTATCTATCTCTAGCCCAAGATATATCTGGCTTGCCATTCTCATAGCTTGCCAGTTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCTGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAGGATAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTCGACGTCAAAGAACGCTCTCGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTAGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTGCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACAAAAGGGCAGC                                                      ]
[+] EMBL OSS14938A            [                                                                                                       TTTCTGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTNCGAGCTGGAGAGGTTNCGTGGACTTGTGCGTGAGTNGGAGGAGAGGGNAGTGAAGTTTta                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB635423             [                                                                                                        TTCTCATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGAGGCAG]
[+] EMBL CB630762             [                                                                                                           TGATGAGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCTGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAGGATAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTCGACGTCAAAGAACGCTCTCGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTAGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTGCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACAAAAGGGCAGCTGTTGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAAGGAGGAGGA     ]
[+] EMBL CB634425             [                                                                                                            GATGCGCCAAGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACC                                    ]
[+] EMBL CB678457             [                                                                                                               GAGCCACGGGAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGG ACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCTACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTCGCTGCAAGAGGAGAGGAATAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAGGGAGCTGGAGGCTGCGACGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGCGAACCACACGAAAGGGCAG                                                       ]
[+] EMBL CB637496             [                                                                                                                            TCTGTGCGTCGTCAGCTCTCCAGCCCGGGCACAGTGATGAGGGCAAGGAGCCATGCTTGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAACAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACATGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGCTCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGACATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAACTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCTTGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAAGAACAGGAG                                                                                                                                                                                                                                                                               ]


>consensus_10511#0 TTTCACTCATTCCAAGGCAACGAGCTGGAGCTCTCCTCCTCCAATGTATCTATCTATCTC TAGCCCAAGATATATCTGGCTTGCCATTCTCATAGCTTGCCAGTTTCTGATGAGCCAAGG GAGCTCTGTGCGTCGTCAGCTCTCCAGCCCGGGACAGTGATGAGGGCAAGGAGCCATGCT TGTCAGGTTAGGCGTCGTTGTTGTAGCCTCCGTCGCAGCTTTAACTCTTAAGAGAGCCAA CAGTGGCAACAGAGATGGCCAAGCAAGGAAAGGAAAAGACAAAACTCGCTACTCTGAACA TGGGGAGAAAGAAGAAGAGAAGGAAGAGGTTAAAACAATCAGCGGCATAATCAATTCAGC TCTTTCAGATGATGACGACATGCTCTCCGAGATCGAGAGCCTCCTATCAGGGGAGATTGA CATCCCCCTACCAAGTGACAGGTTTGACGTCAAAGAACGCTCTTGGTACAACAGTGTTAA CTCCGAGCTGGAGAGGCTGCGTGGACTTGTGCGTGAGCTGGAGGAGAGGGAAGTGAAGCT TGAGGGAGAGCTGCTGGAGTACTATGGCCTCAAGGAACAGGAGACTGATGTTGTAGAGCT ACACAGACAGCTCAAGATCAAGATGGTGGAGATCGACATGCTCAAAATGACCATCAACTC GCTGCAAGAGGAGAGGAAGAAGCTTCAGGATGACGTCGCCCGTGGCACAGGAGCCAAGAG GGAGCTGGAGGCTGCGAGGAACAAGATCAAGGAGCTGCAGCGACAGATACAGATGGAGGC GAACCAGACGAAAGGGCAGCTGATGCTTCTAAAGAACCAGGTGATTGCGCTGAAGTCCAA GGAGGAGGAGGCAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)