These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2011 fasta sequence [CTTGGACTCCACCATTTCAAATCCCCTGCCTCCTCCGCCTCCGCTTCCCCCCTCACCTTCTCCGGCGATCGCCGCCGCGTCCGTACACGGCTGAGGCCTGAGGCGATGGCCGCCGCCGCCGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGAGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGGCCAAGGCGCTCACGCTTCCGGAGGCCACCTCGGTGTCGGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCCGCGTTGCTCACTGATTCCAACGGGATGCTCTCCGGCATACTCACAGCAGAGGACATATCAGGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACGCGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTCAAAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGACATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGTGCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTCCACATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACCATCATAACAGAAAATAACAGTGTTCCAGTAGTATCTCCTTCAGATCCTGTAATAGCAGCTGCCAAAAAAAATGAGAGAATACCGAGTCAACTCAGTGGTTGTCATGACAGGGAACATGTTGCTAGGAATTCTTACTTCCAAGGATTTGGTATTGCGATTAGTGGCCCAAAGTTTATCCCCAGATGTGACTCTTGTAGAAAAGGTTATGACTACAAACCCTGATTGTGCGACATTGGATACATCGATCCTTGAGGCCCTGCATTCAATGCAAGACGGGAAATATCTGCATATTCCTGTTGCCGACAAAAATGGACAGATCATCGCATGTTTGGATGCTCTACAATTAACCCATGCAGCTATTTCAATGGTTGAGGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAAAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTTAGAAAGAATTTCCACGTGCTAAAGCTTGTAAGATTGGATGGTGTTTCATTCAATTTTAGATTGGTTTATTTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTCTTGAGTTTTCTTGTTTCAGCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCA] [+] EMBL AK105424 [CTTGGACTCCACCATTTCAAATCCCCTGCCTCCTCCGCCTCCGCTTCCCCCCTCACCTTCTCCGGCGATCGCCGCCGCGTCCGTACACGGCTGAGGCCTGAGGCGATGGCCGCCGCCGCCGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGAGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGGCCAAGGCGCTCACGCTTCCGGAGGCCACCTCGGTGTCGGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCCGCGTTGCTCACTGATTCCAACGGGATGCTCTCCGGCATACTCACAGCAGAGGACATATCAGGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACGCGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTCAAAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGACATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGTGCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTCCACATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACCATCATAACAGAAAATAACAGTGTTCCAGTAGTATCTCCTTCAGATCCTGTAATAGCAGCTGCCAAAAAAAATGAGAGAATACCGAGTCAACTCAGTGGTTGTCATGACAGGGAACATGTTGCTAGGAATTCTTACTTCCAAGGATTTGGTATTGCGATTAGTGGCCCAAAGTTTATCCCCAGATGTGACTCTTGTAGAAAAGGTTATGACTACAAACCCTGATTGTGCGACATTGGATACATCGATCCTTGAGGCCCTGCATTCAATGCAAGACGGGAAATATCTGCATATTCCTGTTGCCGACAAAAATGGACAGATCATCGCATGTTTGGATGCTCTACAATTAACCCATGCAGCTATTTCAATGGTTGAGGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAAAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTTAGAAAGAATTTCCACGTGCTAAAGCTTGTAAGATTGGATGGTGTTTCATTCAATTTTAGATTGGTTTATTTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTCTTGAGTTTTCTTGTTTCAGCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCA] [+] EMBL CB632908 [ AAATCCCCTGCCTCCTCCGCCTCCGCTTCCCCCCTCACCTTCTCCGGCGATCGCCGCCGCGTCCGTACACGGCTGGGGCCTGAGGCGATGGCCGCCGCCGCCGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGGGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGGCCAAGGCGCTCACGCTTCCGGAGGCCACCTCGGTGTCGGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCCGCGTTGCTCACTGATTCCAACGGGATGCTCTCCGGCATACTCACAGCAGAGGACATATCAGGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACGCGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTCAAAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGACATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGTGCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTCCACATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACC ] [+] EMBL C29112 [ TCGCATGTTTGGATGCTCTACAATTAACCCATGCAGCTATTTCAATGGTTGAGGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAGAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGT ] consensusID : consensus_10538#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 781 fasta sequence [GGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAGAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGCTAAAGCTTGTAAGATTGGATGGTGTTTCAATGAATTTTAGATTGGTTTAGATTGGTTTATTTGAAATTAAAAGA] [-] EMBL CB635845 [GGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAGAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGCTAAAGCTTGTAAGATTGGATGGTGTTTCAATGAATTTTAGATTGGTTTAGATTGGTTTATTTGAAATTAAAAGA] [+] EMBL CA755810 [ GGATTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAGAATCTCGAATGGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTCCTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACCTTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACCTAGGAGAC AACACGT ] consensusID : consensus_10538#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence [AATTATGATTTTCTACTTGATTGCGCCCTTCCTTTATACAGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTTTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGTTAAAGTTTGTAAGATTGGATGGTGTTTCATTCAATTTTAGATTGGTTTAGATTGGTTTATTTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTATTGAGTTTTCTTGTTTCAGCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCAACCAGCTTGGAAAATTTTCTTGTACACGGAAATTGTATTCCAGTCAAAATTAGATGTGAAGCATGTGGGACTACTG] [-] EMBL CB632909 [AATTATGATTTTCTACTTGATTGCGCCCTTCCTTTATACAGTTTCAGAAAGCTTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAGAAGATTAATCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAGTGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGAGCCCTGGAGCAATGGGGAGCACACCACATCGCTTGTAAATACTTCACCGGTGAAAACAGGGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGGTAATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACATCAACATTGTAAAGATTACTTTTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACAAACACGTCAAACATCAGCAATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGTTAAAGTTTGTAAGATTGGATGGTGTTTCATTCAATTTTAGATTGGTTTAGATTGGTTTATTTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTATTGAGTTTTCTTGTTTCAGCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCAACCAGCTTGGAAAATTTTCTTGTACACGGAAATTGTATTCCAGTCAAAATTAGATGTGAAGCATGTGGGACTACTG] consensusID : consensus_10538#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence [CGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGGGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTAAGCGCCGCCGCCCCTCCCCTCGCGATCGCGATGGCTTCCGCCGCAAGGAAGGGCGTTCCTGGCTCCTACCTACCTTCGCCCCGTGCTGATTCATTTGGAGCTTGCGTTTTTGTGCTTGTTAATTTGGCGCGCAGGTCGCCGGAGAGGACGGTGAACAAGCTGAGGTTGGCCAAGGCGCTCACGCTTCCGGAGGTCACCTCGGTGTCAGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCCGCGTTGATCACTGATGCCAACGGGATGCTCTCCGGCATACTCACAGCACAGGACATATCACGACGGGTGATAGCAGAGGGACTCAGGCCTGACGACACAAATGTGGCCAAAGCGATGACGCATAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAGAGATGGTCAAAGGAAAGTTCATACATCTTCCTGTAGTGGAACACGGGGAGGTAATTGCCATG] [+] EMBL CB635844 [CGCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCGGCCGCGGCCAAGCCAGAGCCCAATGGGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTAAGCGCCGCCGCCCCTCCCCTCGCGATCGCGATGGCTTCCGCCGCAAGGAAGGGCGTTCCTGGCTCCTACCTACCTTCGCCCCGTGCTGATTCATTTGGAGCTTGCGTTTTTGTGCTTGTTAATTTGGCGCGCAGGTCGCCGGAGAGGACGGTGAACAAGCTGAGGTTGGCCAAGGCGCTCACGCTTCCGGAGGTCACCTCGGTGTCAGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCCGCGTTGATCACTGATGCCAACGGGATGCTCTCCGGCATACTCACAGCACAGGACATATCACGACGGGTGATAGCAGAGGGACTCAGGCCTGACGACACAAATGTGGCCAAAGCGATGACGCATAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAGAGATGGTCAAAGGAAAGTTCATACATCTTCCTGTAGTGGAACACGGGGAGGTAATTGCCATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CTTGGACTCCACCATTTCAAATCCCCTGCCTCCTCCGCCTCCGCTTCCCCCCTCACCTTC 60 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 TCCGGCGATCGCCGCCGCGTCCGTACACGGCTGAGGCCTGAGGCGATGGCCGCCGCCGCC 120 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GCCTCCCAGCCTCGCAGCCACCAGCCCACCTCGCTCCGCCGCGCGCCGCCACCTTCTTCG 180 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GCCGCGGCCAAGCCAGAGCCCAATGAGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTC 240 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CAGGCACCGTCGCCGGAGAGGACGGTGAAGAAGCTGAGGTTGGCCAAGGCGCTCACGCTT 300 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CCGGAGGCCACCTCGGTGTCGGAGGCGTGCCGGAGGATGGCGCTCAAGCGAGTGGATGCC 360 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GCGTTGCTCACTGATTCCAACGGGATGCTCTCCGGCATACTCACAGCAGAGGACATATCA 420 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GGACGGGTGATAGCAGAGGGACTCAGGCCTGACGAAACAAATGTGGCCAAAGCGATGACG 480 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CGTAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATTGAAGCATTACAAAAGATGGTC 540 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 AAAGGAAAGTTCAGACATCTTCCTGTAGTGGAACACGGTGAGGTAATTGCCATGCTGGAC 600 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 ATTACCAAGTTCCTTTATGATGCAATTTCAAGAATGGAAAAGGCTGCAGAACAAGGCAGT 660 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GCAATAGCAGCTGCTATGGAAGGAGTTGAACGACAGTGGGGAAATGACTTTCCAGGTCCA 720 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CATTCATTTATCGAAAATCTGCGAGACCAGCTGTTCAAGCCTTCCTTATCAACCATCATA 780 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 ACAGAAAATAACAGTGTTCCAGTAGTATCTCCTTCAGATCCTGTAATAGCAGCTGCCAAA 840 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 AAAAATGAGAGAATACCGAGTCAACTCAGTGGTTGTCATGACAGGGAACATGTTGCTAGG 900 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 AATTCTTACTTCCAAGGATTTGGTATTGCGATTAGTGGCCCAAAGTTTATCCCCAGATGT 960 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GACTCTTGTAGAAAAGGTTATGACTACAAACCCTGATTGTGCGACATTGGATACATCGAT 1020 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 CCTTGAGGCCCTGCATTCAATGCAAGACGGGAAATATCTGCATATTCCTGTTGCCGACAA 1080 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 AAATGGACAGATCATCGCATGTTTGGATGCTCTACAATTAACCCATGCAGCTATTTCAAT 1140 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------GGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGA 54 consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GGTTGAGGGAGCTTCTGAAGCGAACAGTATGGCAAATACTATGATGCAGAAGTTCTGGGA 1200 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 TTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAGAATCTCGAAT 114 consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 TTCAGCTCTTGCCCTGCAGCCTGCAGAGGAATCGGATGCCCGTAGTGAAAAATCTCGAAT 1260 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 GGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTC 174 consensus_10538#2 ------------------------------------------------------------ consensus_10538#0 GGCAACATCAGATAATGCTGAAGGGAAACATATACCCCCTCATGTTGGCAATTCATTCTC 1320 consensus_10538#3 --------------------------------------CGCCTCCCAGCCTCGCAGCCAC 22 consensus_10538#1 CTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAG--AAAGC 232 consensus_10538#2 -----AATTATGATTTTCTACTTGAT-TGCGCCCTTCCTTTATACAGTTTCAG--AAAGC 52 consensus_10538#0 CTTTAAACTACAAGATAGAAAAGGGCGTATGCACAGATTCAGTTGTGTTTCAG--AAAGC 1378 consensus_10538#3 CAGCCCACCTCGCTCCGCCGCGCGCC--GCCACCTTCTTCGGCCGCGGCCAAGCCAGAGC 80 * * * * * ** * *** consensus_10538#1 TTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAG-AAGATTAA 291 consensus_10538#2 TTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAG-AAGATTAA 111 consensus_10538#0 TTAGATGAGCTTGTTTCTGCCGTATCGTACAGACTGGGAATGGAAAAAGAG-AAGATTAA 1437 consensus_10538#3 CCA-ATGGGAAGGCCTCCAACTCCAAGCCCGCCTCGCCCGTCCAGGCACCGTAAGCGCCG 139 * *** * * ** * * * * * * * * *** consensus_10538#1 TCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAG 351 consensus_10538#2 TCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAG 171 consensus_10538#0 TCTTCTGTATGATGACGATGAAGGTGACAGGGTGGTTCTGACCACCGACGGTGACCTCAG 1497 consensus_10538#3 CCGCCCCTCCCCTCGCGAT--------CGCGATGGCTTCCGCCGCAAGGAAGGGCGTTCC 191 * * * * **** * * *** * ** * * * * consensus_10538#1 TGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGA 411 consensus_10538#2 TGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGA 231 consensus_10538#0 TGCGGCAATTCAGCATGCGAGATCAGCTGGATGGAAGGTTCTGAGGCTGCATATGGATGA 1557 consensus_10538#3 TGGCTCCTACCTACCTTCGCCCCGTGCTGATTC----ATTTGGAGCTTGCGTTTTTGTGC 247 ** * * * * ** **** * ** *** *** * * ** consensus_10538#1 GCCCTGGAGCAATGGGGAGCACACCACATCGCTTG-TAAATACTTCACCGGTGAAAACAG 470 consensus_10538#2 GCCCTGGAGCAATGGGGAGCACACCACATCGCTTG-TAAATACTTCACCGGTGAAAACAG 290 consensus_10538#0 GCCCTGGAGCAATGGGGAGCACACCACATCGCTTG-TAAATACTTCACCGGTGAAAACAG 1616 consensus_10538#3 TTGTTAATTTGGCGCGCAGGTCGCCGGAGAGGACGGTGAACAAGCTGAGGTTGG--CCAA 305 * * * ** * ** * * * * ** * * ** ** consensus_10538#1 GGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGG 530 consensus_10538#2 GGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGG 350 consensus_10538#0 GGCGGTCATTTCTCCGGCTAGGCATCGCAGCTGGTGCAGTTGCGGTTGCCAGCATGGGGG 1676 consensus_10538#3 GGCGCTCACGCTTCCGG--AGGTCACCTCGGTGTCAGAGGCGTGCCGG--AGGATGGCGC 361 **** *** ***** *** * * ** ** * * * ** **** * consensus_10538#1 T-AATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACAT 589 consensus_10538#2 T-AATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACAT 409 consensus_10538#0 T-AATCTTCTACTTGAAACGTTCTGAACTATAATTAATTCCCACACATACATCAACACAT 1735 consensus_10538#3 TCAAGCGAGTGGATGCCGCGTTGATCACTGATGCCAA---CGGGATGCTCTCCGGCATAC 418 * ** * * ** **** *** ** * * * * ** * consensus_10538#1 CAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACA 649 consensus_10538#2 CAACATTGTAAAGATTACTTTTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACA 469 consensus_10538#0 CAACATTGTAAAGATTACTTCTTCTCCGGAAGGTGAGATGTGTTGTATACGTAGGAGACA 1795 consensus_10538#3 TCACAGCACAGGACATATCACGACGGGTGATAGC-AGAGGGACTCAGGCCTGACGACACA 477 *** * ** * ** * *** * * * * ** *** consensus_10538#1 AACACGTCAAACATCAGCA-ATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGCT 708 consensus_10538#2 AACACGTCAAACATCAGCA-ATAAGGCGTGGACTATGGTAAGAAAGAATTTCCACGTGTT 528 consensus_10538#0 AACACGTCAAACATCAGCA-ATAAGGCGTGGACTATGGTTAGAAAGAATTTCCACGTGCT 1854 consensus_10538#3 AATGTGGCCAAAGCGATGACGCATAACCCAGTTTTTGTTATGTCCAACTCACCAGCCATT 537 ** * * ** * * * * * * ** * * * * *** * consensus_10538#1 AAAGC-TTGTAAGATTGGATGGTGTTTCAATGAATTTTAGATTGGTTTAGATTGGTTTAT 767 consensus_10538#2 AAAGT-TTGTAAGATTGGATGGTGTTTCATTCAATTTTAGATTGGTTTAGATTGGTTTAT 587 consensus_10538#0 AAAGC-TTGTAAGATTGGATGGTGTTTCATTCAATTTTAG----------ATTGGTTTAT 1903 consensus_10538#3 GAAGCATTACAAGA---GATGGTCAAAGGAAAGTTCATACATCTTCCTGTAGTGGAACAC 594 *** ** **** ****** * ** * *** * consensus_10538#1 TTGAAATTAAAAGA---------------------------------------------- 781 consensus_10538#2 TTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTATTGAGTTTTCTTGTTTCA 647 consensus_10538#0 TTTGAGACAGATGGAGCAAAGATTTTTTTGAGGTTTTTTTTCTTGAGTTTTCTTGTTTCA 1963 consensus_10538#3 GGGGAGGTAATTGCCATG------------------------------------------ 612 * * * consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 GCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCAACCAGCTTGGAA 707 consensus_10538#0 GCCTTCCTACCCTTTTTGCAACCTTGTGTGATATAAATAAGGGATTCA------------ 2011 consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ------------------------------------------------------------ consensus_10538#2 AATTTTCTTGTACACGGAAATTGTATTCCAGTCAAAATTAGATGTGAAGCATGTGGGACT 767 consensus_10538#0 ------------------------------------------------------------ consensus_10538#3 ------------------------------------------------------------ consensus_10538#1 ---- consensus_10538#2 ACTG 771 consensus_10538#0 ---- consensus_10538#3 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||