These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10569#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 673 fasta sequence [TTCACATTGCTAGGACATCATCCATGTGAAGGACCGGATGAGAGAACATGCAAGAGTGTCTTTTGTCAGGAGGAACAAATTCTCCATTTTTCCAATATACAAATCTGCTGAATCACAGCATCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT-AAGCATCCTTCTGCCTC-AGCTTCTTCAC-GCCGGCTAT--GAAG-CAGATCTTGTCAGACCTGAAGCTCTCCAAGC-TTATGCTAGCCA-CCTTCA-CCCACACAA-CCACCTTGGTCTTCA-TG-CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC-ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTTGTACTCTCGCAGGAGATCAGAGAGTGACTTGTTTGGTTTGCCTTTGAG-CT---TTCTCAACTCTCAACTGTAGGAACAAACAACAACCTTGGCAGAACTTGAGGAGCAGCACACAATA] [+] EMBL CB966912 [TTCACATTGCTAGGACATCATCCATGTGAAGGACCGGATGAGAGAACATGCAAGAGTGTCTTTTGTCAGGAGGAACAAATTCTCCATTTTTCCAATATACAAATCTGCTGAATCACAGCATCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT AAGCATCCTTCTGCCTC AGCTTCTTCAC GCCGGCTAT GAAG CAGATCTTGTCAGACCTGAAGCTCTCCAAGC TTATGCTAGCCA CCTTCA CCCACACAA CCACCTTGGTCTTCA TG CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTTGTACTCTCGCAGGAGATCAGAGAGTGACTTGTTTGGTTTGCCTTTGAG CT ] [+] EMBL CB967324 [TTCACATTGCTAGGACATCATCCATGTGAAGGACCGGATGAGAGAACATGCAAGAGTGTC TTTGTCAGGAGGAACAAATTCTCCATTTTTCCAATATACAAATCTGCTGAATCACAGCATCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT AAGCATCCTTCTGCCTC AGCTTCTTCAC GCCGGCTAT GAAG CAGATCTTGTCAGACCTGAAGCTCTCCAAGC TTATGCTAGCCA CCTTCA CCCACACAA CCACCTTGGTCTTCA TG CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTGGTACTCTCGCAGGAGATCAGAGAGTGACTTGTTTGGTTGGCCTTTGAG CT ] [+] EMBL CB964890 [TTCACATTGCTAGGACATCATCCATGTGAAGGACCGGATGAGAGAACATGCAAGAGTGTC TTTGTCAGGAGGAACAAATTCTCCATTTTTCCAATATACAAATCTGCTGAATCACAGCATCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT AAGCATCCTTCTGCCTC AGCTTCTTCAC GCCGGCTAT GAAG CAGATCTTGTCAGACCTGAAGCTCTCCAAGC TTATGCTAGCCA CCTTCA CCCACACAA CCACCTTGGTCTTCA TG CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTTGTACTCTCGCAGGAGATCAG ] [-] EMBL AU089771 [ TTTTGTCAGGAGGAACAAATTCTCCATGTTTCCAATATACAAATCTGCTGAATCACAGCACCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT AAGCATCCTTCTGCCTC AGCTTCTTCAC GCCGGCTATN GAAG CAGATCTTGTCAGACCTGAAGCTCTCCAAGC TTATGCTAGCCA CCTTCA CCCACACAA CCACCTTGG ] [-] EMBL AK058684 [ ACAAATTCTCCATGTTTCCAATATACAAATCTGCTGAATCACAGCACCAGAAATCACCAATGTGTCCTCCAGAGAATCACACACCACATGGACTCAAAAAAAATGGTAAGAATGAAACTATGAGATAACACTGATCAATTCAGGTTCAGAACTCCTCAACTGCGATGCCTTCCCTGGGGACCTCAT AAGCATCCTTCTGCCTC AGCTTCTTCAC GCCGGCTAT GAAG CAGATCTTGTCAGACCTGAAGCTCTCCAAGC TTATGCTAGCCA CCTTCA CCCACACAA CCACCTTGGTCTTCA TG CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATCCGT ] [-] EMBL OSS15405A [ CATAAAGCATCCTTCTGCCTCAAGCTTCTTAACGGCCGGCTATTNAAAGCCAGATCTTGTCAGACCTGAAGCTCTCCAAGCTTTATGCTAGCCACCCTTCACCCCACACAACCCACCTTGGTCTTCA TG CCTTCGATCGCGGAGAGCTTGCCTCGAGACAGAGTC ACCTTGACACGAGGCGCGTACCGTATCACGGATGAATCCTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTTGTACTCTCGCAGGAGATCAGAGAGTGACTTGTTTGGTTTGC GAGTCTCAATTCTCAACTCTCAACTGTAGGAACAAACAACAACCTTGGCAGAACTTGAGGAGCAGCACACAATA] [-] EMBL OSS15412A [ TGGNCTTCATTGACCTTCGATCGCGGAGAGCTTNCCTCGAGACAGAGTCAANCTTGACACGAGACGCGTACCGTATCACGGATGAATACTTGAAGCTCACCTCACAGGGCTTAGACAGGTGCACAACAAGCTTCGAGCTTGTTTGATCATATTCGTAGCAGATGATATTCCGAGGGAAGAGGCCTGGAGGAAGGTTGTACTCTCGCAGGAGATCAGAGAGTGACTTGTTTGGTTTGC GAGTCTCAATTCTCAACTCTCAACTGTAGGAACAAACAACAACCTTGGCAGAACTTGAGGAGCAGCACACAATA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||