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Oryza sativa
cluster # 10617 cluster # 10617       Sequences # 7       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10617#0 length = 1641 sequences # 3  
consensus_10617#1 length = 813 sequences # 4  

consensusID : consensus_10617#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1641
fasta sequence
                              [AGTAAAACCGTGAAACCGAGGAGCTTGTTAAGAATCTGGAGTCCGAGGTTTCACGTTCTGAAGGCCAACTAGAGGAAGCCAGAATTATTGAGGAGAGGTTACCGAGACGGAAAAACTGATTGAGGAGCTTAAATCAGAGGTTGCTGATGCGAAGAAGGCCGAATCAGAAGCCCGTCAGCTATTCGAAGAATGGAAGCACAAGGCAGGATTGCTTGAAATGGAATTGGAGGCAGTTACTCTCTCAGATAAGTTCAAAGGTGAATCGCTTGCCTCCACAACAGAAGAATTGGGTAAGATCCAGTCTGCATTACACAGATAGAGAATCTGAAATTGAAGTGCTCAAAGGAAAGACAACTGCCCTTGGAAATTGAGGTAGCAAGGCTTTTAGCAGATGTCAACGAATCCACGAGCATTTGATGCATCTCAGCAAGAGGTG-TTTGGGCTACAGACGACTATAGATGTTCTGAGAAACAAGCTTGAGGCTGCTGAAGAAGCAGCTTCAGAGGCCTTAAAC-ATGAGAAGGCCGCGAATGTAAAGATTGAAGGCCTGACCGAGGAGAATGTGAAGCTAATAAGCGAGTTGAACGAGACTAGGGATAGAAAAAAGAAGGAGAAAAGAGCAGTGGAAGATCTTACTGCTGCATTGAGTGAGGAATCTGACAAAGCAAAGGAAGCACATGAGAGGTATTTGAGCAAAGAAGATGACCACGAGCATGCCCTCGCGCAGATTGGTGATCTTAAGATGGCCCTAAAAAGCACCAAGGAGAGTTATGAGGTAATGCTTGATGAGGCAAACTATGACATCACTTGCTTAAGGAAAAATGTTGATAAATTGGAGGCTGAGGTGAACAAGTACAGAGAAGAATGTGAGTCTAAGGAGACTGACATTGTCAGGTTAAACAAGCAGTCGGAGGAAGAAATTAGTGCTCTTCAATTAGAAGTCGACAAGGCAGTGGAATCACTGCAAGATGCCGAGCACCAACTCCAAGTTGCCAACGAGGAGAAAGAAAAGCTTCAAGAGAGGCTGGTGTACACTGAATCAGCGTGTGCTGAGGCTAGCAAGGCTCTGCATGAGGCAAAGACTGAGAAGGAGAGTCTTAAAGAGAAACTGATTTACACAGAAGCTGCTGTTGCTGAAGCCAACAAGTCTGTGCAGGAGGCAACATATGAAAATTCACAACTGAAGGAGCGATTACTAGATAAAGAGAACGCACTGCAGAGCCTAACCCAGGAGAACGACGAGTTCAGGTTGCGAGAAGCTGATGCCATGAAGAAGATAGATGAATTGTCTGCCTTGCTTGCTGAAGCGATGATAAAGAAACATCCCGAGGAGGAGGAGAAGCTAGTGGTTGTGGACGANGCACACAGTTCTGTTCACGAAGAAGNTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAACGATNAAAACCCTAACTGGAACTTGATGNTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCANGNTGAGCAGGAGGAAGTNAAAACCGAGTGCNCCACACAGGAGAGCACAAAATCATCGNGAACAGCCCCTTCAGACAGAAACAGAAACCGNTNCTNCAANATGACTGGAGCCCAGGNGGNACCACACTGN]

[+] EMBL BI805877             [AGTAAAACCGTGAAACCGAGGAGCTTGTTAAGAATCTGGAGTCCGAGGTTTCACGTTCTGAAGGCCAACTAGAGGAAGCCAGAATTATTGAGGAGAGGTTACCGAGACGGAAAAACTGATTGAGGAGCTTAAATCAGAGGTTGCTGATGCGAAGAAGGCCGAATCAGAAGCCCGTCAGCTATTCGAAGAATGGAAGCACAAGGCAGGATTGCTTGAAATGGAATTGGAGGCAGTTACTCTCTCAGATAAGTTCAAAGGTGAATCGCTTGCCTCCACAACAGAAGAATTGGGTAAGATCCAGTCTGCATTACACAGATAGAGAATCTGAAATTGAAGTGCTCAAAGGAAAGACAACTGCCCTTGGAAATTGAGGTAGCAAGGCTTTTAGCAGATGTCAACGAATCCACGAGCATTTGATGCATCTCAGCAAGAGGTGCTTTGGGCTACAGACGACTATAGATGTTCTGAGAAACAAGCTTGAGGCTGCTGAAGAAGCAGCTTCAGAGGCCTTAAAC ATGAGAAGGCCGCGAATGTAAAGATTGAAGGCCTGACCGAGGAGAATGTGAAGCTAATAAGCGAGTTGAACGAGACTAGGGATAGAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BP184520             [                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGTG TTTGGGCTACAGACGACTATAGATGTTCTGAGAAACAAGCTTGAGGCTGCTGAAGAAGCAGCTTCAGAGGCCTTAAACAATGAGAAGGCCGCGAATGTAAAGATTGAAGGCCTGACCGAGGAGAATGTGAAGCTAATAAGCGAGTTGAACGAGACTAGGGATAGAGAAGAGAAGGAGAAAAGAGCAGTGGAAGATCTTACTGCTGCATTGAGTGAGGAATCTGACAAAGCAAAGGAAGCACATGAGAGGTATTTGAGCAAAGAAGATGACCACGAGCATGCCCTCGCGCAGATTGGTGATCTTAAGATGGCCCTAAAAAGCACCAAGGAGAGTTATGAGGTAATGCTTGATGAGGCAAACTATGACATCACTTGCTTAAGGAAAAATGTTGATAAATTGGAGGCTGAGGTGAACAAGTACAGAGAAGAATGTGAGTCTAAGGAGACTGACATTGTCAGGTTAAACAAGCAGTCGGAGGAAGAAATTAGTGCTCTTCAATTAGAAGTCGACAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB096255             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGAGGTAATGCTTGATGAGGCAAACTATGACATCACTTGCTTAAGGAAAAATGTTGATAAATTGGAGGCTGAGGTGAACAAGTACAGAGAAGAATGTGAGTCTAAGGAGACTGACATTGTCAGGTTAAACAAGCAGTCGGAGGAAGAAATTGGTGCTCTTCAATTAGAAGTCGACAAGGCAGTGGAATCACTGCAAGATGCCGAGCACCAACTCCAAGTTGCCAACGAGGAGAAAGAAAAGCTTCAAGAGAGGCTGGTGTACACTGAATCAGCGTGTGCTGAGGCTAGCAAGGCTCTGCATGAGGCAAAGACTGAGAAGGAGAGTCTTAAAGAGAAACTGATTTACACAGAAGCTGCTGTTGCTGAAGCCAACAAGTCTGTGCAGGAGGCAACATATGAAAATTCACAACTGAAGGAGCGATTACTAGATAAAGAGAACGCACTGCAGAGCCTAACCCAGGAGAACGACGAGTTCAGGTTGCGAGAAGCTGATGCCATGAAGAAGATAGATGAATTGTCTGCCTTGCTTGCTGAAGCGATGATAAAGAAACATCCCGAGGAGGAGGAGAAGCTAGTGGTTGTGGACGANGCACACAGTTCTGTTCACGAAGAAGNTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAACGATNAAAACCCTAACTGGAACTTGATGNTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCANGNTGAGCAGGAGGAAGTNAAAACCGAGTGCNCCACACAGGAGAGCACAAAATCATCGNGAACAGCCCCTTCAGACAGAAACAGAAACCGNTNCTNCAANATGACTGGAGCCCAGGNGGNACCACACTGN]


>consensus_10617#0 AGTAAAACCGTGAAACCGAGGAGCTTGTTAAGAATCTGGAGTCCGAGGTTTCACGTTCTG AAGGCCAACTAGAGGAAGCCAGAATTATTGAGGAGAGGTTACCGAGACGGAAAAACTGAT TGAGGAGCTTAAATCAGAGGTTGCTGATGCGAAGAAGGCCGAATCAGAAGCCCGTCAGCT ATTCGAAGAATGGAAGCACAAGGCAGGATTGCTTGAAATGGAATTGGAGGCAGTTACTCT CTCAGATAAGTTCAAAGGTGAATCGCTTGCCTCCACAACAGAAGAATTGGGTAAGATCCA GTCTGCATTACACAGATAGAGAATCTGAAATTGAAGTGCTCAAAGGAAAGACAACTGCCC TTGGAAATTGAGGTAGCAAGGCTTTTAGCAGATGTCAACGAATCCACGAGCATTTGATGC ATCTCAGCAAGAGGTGTTTGGGCTACAGACGACTATAGATGTTCTGAGAAACAAGCTTGA GGCTGCTGAAGAAGCAGCTTCAGAGGCCTTAAACATGAGAAGGCCGCGAATGTAAAGATT GAAGGCCTGACCGAGGAGAATGTGAAGCTAATAAGCGAGTTGAACGAGACTAGGGATAGA AAAAAGAAGGAGAAAAGAGCAGTGGAAGATCTTACTGCTGCATTGAGTGAGGAATCTGAC AAAGCAAAGGAAGCACATGAGAGGTATTTGAGCAAAGAAGATGACCACGAGCATGCCCTC GCGCAGATTGGTGATCTTAAGATGGCCCTAAAAAGCACCAAGGAGAGTTATGAGGTAATG CTTGATGAGGCAAACTATGACATCACTTGCTTAAGGAAAAATGTTGATAAATTGGAGGCT GAGGTGAACAAGTACAGAGAAGAATGTGAGTCTAAGGAGACTGACATTGTCAGGTTAAAC AAGCAGTCGGAGGAAGAAATTAGTGCTCTTCAATTAGAAGTCGACAAGGCAGTGGAATCA CTGCAAGATGCCGAGCACCAACTCCAAGTTGCCAACGAGGAGAAAGAAAAGCTTCAAGAG AGGCTGGTGTACACTGAATCAGCGTGTGCTGAGGCTAGCAAGGCTCTGCATGAGGCAAAG ACTGAGAAGGAGAGTCTTAAAGAGAAACTGATTTACACAGAAGCTGCTGTTGCTGAAGCC AACAAGTCTGTGCAGGAGGCAACATATGAAAATTCACAACTGAAGGAGCGATTACTAGAT AAAGAGAACGCACTGCAGAGCCTAACCCAGGAGAACGACGAGTTCAGGTTGCGAGAAGCT GATGCCATGAAGAAGATAGATGAATTGTCTGCCTTGCTTGCTGAAGCGATGATAAAGAAA CATCCCGAGGAGGAGGAGAAGCTAGTGGTTGTGGACGANGCACACAGTTCTGTTCACGAA GAAGNTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAACGATNAAAACCCTA ACTGGAACTTGATGNTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAA AGGCGAAACCANGNTGAGCAGGAGGAAGTNAAAACCGAGTGCNCCACACAGGAGAGCACA AAATCATCGNGAACAGCCCCTTCAGACAGAAACAGAAACCGNTNCTNCAANATGACTGGA GCCCAGGNGGNACCACACTGN



consensusID : consensus_10617#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 813
fasta sequence
                              [GAGAAGCTAGTGGTTGTGGACGAGGCATACAGTTCTGTTCACGAAGAAGTTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAAACGATAAAAACCCTAAACTGGAACTTGATGTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCAAGGTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAGAAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCCAAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTG-TTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTGTCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGTTATCTACACGATTGTGGCAGCTCGAGTGTAACTGGAGTTCCTCCTGATCAGAATGGTTTTTCA-TTTCTGAGAATGTGCAGCTCCTTGTGATAAAATTCATGTAATGTAATGTACCAGTGACAACTCCTAATCATATTTGTTGGCATTCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CA999982             [GAGAAGCTAGTGGTTGTGGACGAGGCATACAGTTCTGTTCACGAAGAAGTTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAAACGATAAAAACCCTAAACTGGAACTTGATGTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCAAGGTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAGAAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCCAAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTG TTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTGTCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGTTATCTACACGATTGTGGCAGCTCGAGTGCAACTGGAGTTCCTCCTGATCAGAATGGTTTTTCA TTTCTGAGAATGTGCAGCTCCTTGTGATAAAATTCATGTAATGTAATGTACCAGTGACAACTCCTAATCATATTTGTTGGCATTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA766213             [ AGAAGCTAGTGGTTGTGGACGAGGCACACAGTTCTGTTCACGAAGAAGTTACAGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAAACGATAAAAACCCTAAACTGGAACTTGATGTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCAAGGTTGAGCAGGAGGAAGTAAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAGAAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCCAAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTGTTTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTGTCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGNTATCTACACGATTGTGGCAGCTCGAGTGTAACTGGAGTTCCTCCTGATCAGAATGGNTTTTCATTTTCTGAGAATGTGCAGCTCCTTGTGATAAAATTCATGTAATGGAATGTACCAGNGACAACTCCTAATCATATTTGTT                                 ]
[+] EMBL BP184521             [                                                                                                     CCCTAAACTGGAACTTGATGTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCAAGGTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAGAAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCCAAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTG TTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTGTCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGTTATCTACACGATTGTGGCAGCTCGAGTGTAACTGGAGTTCCTCCTGATCAAAAaa                                                                                                                        ]
[+] EMBL AK062482             [                                                                                                                                                                  GAGAAAGGCGAAACCAAGGTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAGAAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCCAAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTG TTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTGTCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGTTATCTACACGATTGTGGCAGCTCGAGTGTAACTGGAGTTCCTCCTGATCAGAATGGTTTTTCA TTTCTGAGAATGTGCAGCTCCTCCTGATAAAATTCATGTAATGTAATGTACCAGTGACAACTCCTAATCATATTT                                    ]


>consensus_10617#1 GAGAAGCTAGTGGTTGTGGACGAGGCATACAGTTCTGTTCACGAAGAAGTTACAGATTCA GTGGTGGAAAATGGAGACGCAGAAAGCGAAAACGATAAAAACCCTAAACTGGAACTTGAT GTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGAAACCAAG GTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAATCATCGAG AAGCAGCCACATCCAGACAGAAAACAAGAAACCGTATCCTCCAAAGATGAACTGGAGCCC AAGGAGGATACCAACACTGAGCATCCAAATGGGACAGTATCAGAAGATACCAGCAAAGTG GCAATGTCCCCGACAAAACCACAGCAGCAACAGAAAAAGAACAAGCCTCTTCTGAAGAAG TTTGGGAGCTTACTGAAAAAGAAAAACAGCAAGTAGGTGAACGACACATGTACTACTATT GCTATTCTGATTTGTTTTTTTTTGTTTGACAAGGTAGTGTGGTTTTCTACGAGTTTACTG TCAATGGCTGTACTTGTTCTGGTGATTGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTAT AATTTGGACCTCCTGTTCTTGCCCTGTGTCTGTGGTTGTTATCTACACGATTGTGGCAGC TCGAGTGTAACTGGAGTTCCTCCTGATCAGAATGGTTTTTCATTTCTGAGAATGTGCAGC TCCTTGTGATAAAATTCATGTAATGTAATGTACCAGTGACAACTCCTAATCATATTTGTT GGCATTCAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10617#0      AGTAAAACCGTGAAACCGAGGAGCTTGTTAAGAATCTGGAGTCCGAGGTTTCACGTTCTG 60
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      AAGGCCAACTAGAGGAAGCCAGAATTATTGAGGAGAGGTTACCGAGACGGAAAAACTGAT 120
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      TGAGGAGCTTAAATCAGAGGTTGCTGATGCGAAGAAGGCCGAATCAGAAGCCCGTCAGCT 180
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      ATTCGAAGAATGGAAGCACAAGGCAGGATTGCTTGAAATGGAATTGGAGGCAGTTACTCT 240
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      CTCAGATAAGTTCAAAGGTGAATCGCTTGCCTCCACAACAGAAGAATTGGGTAAGATCCA 300
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      GTCTGCATTACACAGATAGAGAATCTGAAATTGAAGTGCTCAAAGGAAAGACAACTGCCC 360
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      TTGGAAATTGAGGTAGCAAGGCTTTTAGCAGATGTCAACGAATCCACGAGCATTTGATGC 420
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      ATCTCAGCAAGAGGTGTTTGGGCTACAGACGACTATAGATGTTCTGAGAAACAAGCTTGA 480
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      GGCTGCTGAAGAAGCAGCTTCAGAGGCCTTAAACATGAGAAGGCCGCGAATGTAAAGATT 540
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      GAAGGCCTGACCGAGGAGAATGTGAAGCTAATAAGCGAGTTGAACGAGACTAGGGATAGA 600
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      AAAAAGAAGGAGAAAAGAGCAGTGGAAGAT-CTTACTGCTGCATTGAGTGAGGAATCTGA 659
consensus_10617#1      ------GAGAAGCTAGTGGTTGTGGACGAGGCATACAGTTCTGTTCA-CGAAGAAGTTAC 53
                              ** **  *   *  ***** **  * *** * *   ** *  ** ***  *  

consensus_10617#0      CAAAGCAAAGGAAGCACATGAGAGGTATTTGAGCAAAGAAGATGA---CCACGAGCATGC 716
consensus_10617#1      AGATTCAGTGGTGGAAAATGGAGACGCAGAAAGCGAAAACGATAAAAACCCTAAACTGGA 113
                         *  **  **  * * ***           *** ** * *** *   **   * *  * 

consensus_10617#0      CCTCG---CGCAGATTGGTGATCTTAAGATGGCCCTAAAAAGCACCAAGGAGAGTTATGA 773
consensus_10617#1      ACTTGATGTTCTCAATAGGAGCTCCAATGGGGACATGAATCACGAAGAAGAGAAAGGCGA 173
                        ** *     *  * * *       **   ** * * **   *    * ****     **

consensus_10617#0      GGTAATGCTTGATGAGGCAAACTATGACATCACTTGCTTAAGGAAAAATGTTGATAAATT 833
consensus_10617#1      AACCAAGGTTGAGCAGGAGGAAGTGAAAACCGAGTGCACCACACAGGAGAGCAACAAAAT 233
                           * * ****  ***   *     * * *   ***   *   *  *     * *** *

consensus_10617#0      GGAGGCTGAGGTGAACAAGTACAGAGAAGAATGTGAGTCTAAGGAGACTGACATTGTCAG 893
consensus_10617#1      CATCGA-GAAGCAGCCACATCCAGACAGAAA-------ACAAGAAACCGTATCCTCCAAA 285
                           *  ** *    **  * **** *  **         *** *  *  *   *   * 

consensus_10617#0      GTTAAACAAGCAGTCGGAGGAAGAAATTAGTGCTCTTCAATTAGAAGTCGACAAGGCAGT 953
consensus_10617#1      GATGAACTGG-AGCCCAAGGAGGATACCAACACTGAGCATCCAAATG------GGACAGT 338
                       * * ***  * ** *  **** ** *  *   **   **   * * *       * ****

consensus_10617#0      GGAATCACTGCAAGATGCCGAGCACCAACTCCAAGTTGCCAACGAGGAGAAAGAAAAGCT 1013
consensus_10617#1      ------ATCAGAAGATACC-AGCAAAGTGGCAATGTCCCCGACAAAACCACAGCAGCAAC 391
                             *    ***** ** ****      * * **  ** ** *    * ** *     

consensus_10617#0      TCAAGAGAGGCTGGTGTACACTGAATCAGCGTGTGCTGAGGCTAGCAAGGCTCTGCATGA 1073
consensus_10617#1      AGAAAAAGAACAAGCCTCTTCTGAAGAAGTTTGGGAGCTTACTGAAAAAGAAAAACAGCA 451
                         ** *    *  *  *   *****  **  ** *      **   ** *     **  *

consensus_10617#0      GGCAAA-GACTGAGAAGGAGAGTCTTAAAGAGAAACTGATTTACACAGAAGCTGCTGTTG 1132
consensus_10617#1      AGTAGGTGAACGACACATGTACTACTATTGCTATTCTGATTTGTTTT----TTTTTGTTT 507
                        * *   **  ** *     * *  **  *  *  *******          *  **** 

consensus_10617#0      CTGAAGCCAACAAGTCTGTGCAGGAGGCAACATATGAAAATTCACAACTGAAGGAGCGAT 1192
consensus_10617#1      GACAAGGTAGTGTGGTTTTCTACGAGTTTAC-TGTCAATGGCTGTACTTGTTCTGGTGAT 566
                          ***  *    *  * *  * ***   ** * * **       *  **     * ***

consensus_10617#0      TAC--TAGATAAAGAGAA-CGCACTGCAGAGCCTAACCCAGGAGAACGACGAGTTCAGGT 1249
consensus_10617#1      TGCAGTAGTTTGTGGGTGTCTCATTTTTTTTTATAATTTGGACCTCCTGTTCTTGCCCTG 626
                       * *  *** *   * *   * ** *        ***    *     *      * *    

consensus_10617#0      TGCGAGAAGCTGATGCC---ATGAAGAAGATAGATGAATTGT--CTGCCTTGCTTGCTGA 1304
consensus_10617#1      TGTCTGTGGTTGTTATCTACACGATTGTGGCAGCTCGAGTGTAACTGGAGTTCCTCCTGA 686
                       **   *  * ** *  *   * **    *  ** *  * ***  ***   * * * ****

consensus_10617#0      AGCGATGATAAAGAAACATCCCGAGGAGGAGGAGAAGCTAGTGGTTGTGGACGANGCACA 1364
consensus_10617#1      --TCAGAATGGTTTTTCATTTC--TGAGAATGTGCAGCTCCTTGTGATAAAATTCATGTA 742
                           *  **       ***  *   *** * * * ****  * **  *  *        *

consensus_10617#0      CAGTTCTGTTCACGAAGAAGNTACAGATT-CAGTGGTGGAAAATGGAGACGCAGAAAGCG 1423
consensus_10617#1      ATGTAATGTACCAGTGACAACTCCTAATCATATTTGTTGGCATTCAAAAAAAAAAAAAAA 802
                         **  *** *  *    *  * *  **   * * ** *  * *  * *   * ***   

consensus_10617#0      AAACGATNAAAACCCTAACTGGAACTTGATGNTCTCAATAGGAGCTCCAATGGGGACATG 1483
consensus_10617#1      AAAAAAAAAAA------------------------------------------------- 813
                       ***  *  ***                                                 

consensus_10617#0      AATCACGAAGAAGAGAAAGGCGAAACCANGNTGAGCAGGAGGAAGTNAAAACCGAGTGCN 1543
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      CCACACAGGAGAGCACAAAATCATCGNGAACAGCCCCTTCAGACAGAAACAGAAACCGNT 1603
consensus_10617#1      ------------------------------------------------------------
                                                                                   

consensus_10617#0      NCTNCAANATGACTGGAGCCCAGGNGGNACCACACTGN 1641
consensus_10617#1      --------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)