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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10675#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2618 fasta sequence
[TATAGCAGCATCCATGCCAGTGACCCCAGACACTGCTCATAATTCACTGTCTAATGACAGGAGTGCCACTCCAGAGCCTCCAGTGGGCTCTGGCCTCAACCATGCTGGTTCTGAAATGTTTCAACCAACTGAAAGAAAGGGTAGATTAAAAGGTTCTGCACCACATGACACCTTGAGTAATGCTGGAACTGCTGCCAGTGCTGGCATGGGTACATCTGTCTTGGTTCCTGTGAAGGCGACACAATTCGAGTCCGGCAGTGCTATCACCCATACGAAGGACATCCCAAGACCAGCTGGTGATATTTCCAATGCAATCATTTCTACTGGTACCCTGATCCCTCAGAAGGTGTCGCAGGTGAAGCTTGTTAAGGACATCAGCCAACAAACGAACACCCAAAAGCTAGTTGGCTCTACTTCCAATACAGGTGATCGCAACGATCCGATGATCTCTGCAAAGGTGCCTCAGCTCCAGTTAGTGAGGGACACCACCCTCCAGATGGTCACTGGGAAGCCAGCTAGCATTGCCACCAGTGCAAGCCATGGTACTGCTGTGCCGATCTCTCGGCAGGTGCCCTGGGTCAAGTTGGTGAAGGATGTCACCCCGCAGATGCTCACCTCGAGACTTGGCAGTGCTGCTGTCAAAGTTGACTATCGTACGGCTGTGGCGATCCCTCAGAAGTTGTCCCAGCTCAAGTTAGTCAAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCCACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTATGCTGACCGAC-ATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCACATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGAGAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAACTAGAACTCTAGAAGAATTTCCAGGAGGAATGGCATAGATGATGATATGCACCTCTGCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTTTTGTGGGTGCCCGTGCCATTTGCAGCAACTCTGGATTGTTCGGGTCTTTGGGGGAGGATTTTCCACTGTTACACCATACCATCAGATGTGGGGTGATGACATCAGCATGTCGAACGAAATCCTGGAAAAAAAACTCTATATGCAACTCTGGATTGTTCGGAGAGGATTTTCCACTGTTACACCATACCATCAAATGTGGGGTGATGACTGATGACATCAGCATGTGCAACGAAATCCTGGAAAAGAACTCTATATGGTGTGTATAATTTATAATATGCTGAAGGTAATCATAACTCTTGTTTATAAATGCATGGCTCTGTTGACCTCTCCTCTCATAAGTACACAAAATTTTATGCATTTTTATTTGGCAGTACTTGAGGTTTTCTTTTTCTGTTTAGGTTTAATTATTTATTTGTTATTTATGTTAATTTCTTAATTTCCAGTTTGCTAAATTGATACAAGCTCAGAAGCTCATCATGCCATGCAAGATCTGATTGAATGCTTCTGATACTCATTCTTCAATCAAACTGTTCATAGTTCATACATTAAATATCTGCGTGTTTGCTTTAGGAATTAGCAGAGACAATTCGGCTAATGAATTGATGCACAACGAGACCTCGTGAACATGTATGATTGTACAAGTTGTTTTCCCTAATCCTTCTATTTTCATAAATATCTGTTAACCTTCCATAAAAAAAAGAGGCATAAACTTTTGTGCCATCTTATTAGGAACATCTCAGTGCTTCAGTGCTATGGAAGAGAAAGCATGGAAATTCGTTACTCCTTTCTAATCAAATATATTTTGTGGAATACACAATAACATATTAACTTTTCTGTTTGCATGTTGATCAAGGAAAAATCATCTAACCAAACTCCAAATAGAACAACATAATTTATTTTAGAACATTGCTATTAGTTCGTAAGCAGCTTTCTTATGTCAATTTTTGAAAGCGTTTGCGTCATTCAACTACCCATTGGCACAACATAGTTAAAGATGCTCATCTGATTTTATTGATAAAAATGACAACTGTCCCCGCTGCGTGCAGAGATGCAGAGAATAGGTGTCTGACAAAATTCAAGTGCCAAAGGCTCAGCCTGGCTCAGGCGAAATCCGCCATCATTTGCAGCCTGGTTTCTGCAGAGCCCTAAAACTGTCGCTGACTCACCTACTTGCTTGGCAACACCTCTAGTTTGATGTACAGAAGTAACTCTTTTTGACAAACCAGCAAATTGATCGTGTATGTACGGTCATATTCTGCTCCATTTGATGCCACCAAGGTCAACCGTTAATTTTCGTAAATCTGAAGTTCTGAACTTTGTCATCATGTCTCTTGGTGTGTGAATGCAGCAGGAATTAGAATTCCATGCCATGATGCTCTTGCCAAGCTGAATAATGTGTGTATTCAAGACTTCAAGGTTAATGCATG]
[+] EMBL CB645116 [TATAGCAGCATCCATGCCAGTGACCCCAGACACTGCTCATAATTCACTGTCTAATGACAGGAGTGCCACTCCAGAGCCTCCAGTGGGCTCTGGCCTCAACCATGCTGGTTCTGAAATGTTTCAACCAACTGAAAGAAAGGGTAGATTAAAAGGTTCTGCACCACATGACACCTTGAGTAATGCTGGAACTGCTGCCAGTGCTGGCATGGGTACATCTGTCTTGGTTCCTGTGAAGGCGACACAATTCGAGTCCGGCAGTGCTATCACCCATACGAAGGACATCCCAAGACCAGCTGGTGATATTTCCAATGCAATCATTTCTACTGGTACCCTGATCCCTCAGAAGGTGTCGCAGGTGAAGCTTGTTAAGGACATCAGCCAACAAACGAACACCCAAAAGCTAGTTGGCTCTACTTCCAATACAGGTGATCGCAACGATCCGATGATCTCTGCAAAGGTGCCTCAGCTCCAGTTAGTGAGGGACACCACCCTCCAGATGGTCACTGGGAAGCCAGCTAGCATTGCCACCAGTGCAAGCCATGGTACTGCTGTGCCGATCTCTCGGCAGGTGCCCTGGGTCAAGTTGGTGAAGGATGTCACCCCGCAGATGCTCACCTCGAGACTTGGCAGTGCTGCTGTCAAAGTTGACTATCGTACGGCTGTGGCGATCCCTCAGAAGTTGTCCCAGCTCAAGTTAGTCAAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACT ]
[+] EMBL BF430585 [ AGCTGGTGATATTTCCAATGCAATCATTTCTACTGGTACCCTGATCCCTCAGAAGGTGTCGCAGGTGAAGCTTGTTAAGGACATCAGCCAACAAACGAACACCCAAAAGCTAGTTGGCTCTACTTCCAATACAGGTGATCGCAACGATCCGATGATCTCTGCAAAGGTGCCTCAGCTCCAGTTAGTGAGGGACACCACCCTCCAGATGGTCACTGGGAAGCCAGCTAGCATTGCCACCAGTGCAAGCCATGGTACTGCTGTGCCGATCTCTCGGCAGGTGCCCTGGGTCAAGTTGGTGAAGGATGTCACCCCGCAGATGCTCACCTCGAGACTTGGCAGTGCTGCTGTCAAAGTTGACTATCGTACGGCTGTGGCGATCCCTCAGAAGTTGTCCCAGCTCAAGTTAGTCAAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCCACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTATGCTGACCGAC ATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGC ]
[+] EMBL AK105494 [ CTATCGTACGGCTGTGGCGATCCCTCAGAAGTTGTCCCAGCTCAAGTTAGTCAAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCCACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTATGCTGACCGACAATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCACATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGAGAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAACTAGAACTCTAGAAGAATTTCCAGGAGGAATGGCATAGATGATGATATGCACCTCTGCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTTTTGTGGGTGCCCGTGCCATTTGCAGCAACTCTGGATTGTTCGGGTCTTTGGGGGAGGATTTTCCACTGTTACACCATACCATCAGATGTGGGGTGATGACATCAGCATGTCGAACGAAATCCTGGAAAAAAAACTCTATATGCAACTCTGGATTGTTCGGAGAGGATTTTCCACTGTTACACCATACCATCAAATGTGGGGTGATGACTGATGACATCAGCATGTGCAACGAAATCCTGGAAAAGAACTCTATATGGTGTGTATAATTTATAATATGCTGAAGGTAATCATAACTCTTGTTTATAAATGCATGGCTCTGTTGACCTCTCCTCTCATAAGTACACAAAATTTTATGCATTTTTATTTGGCAGTACTTGAGGTTTTCTTTTTCTGTTTAGGTTTAATTATTTATTTGTTATTTATGTTAATTTCTTAATTTCCAGTTTGCTAAATTGATACAAGCTCAGAAGCTCATCATGCCATGCAAGATCTGATTGAATGCTTCTGATACTCATTCTTCAATCAAACTGTTCATAGTTCATACATTAAATATCTGCGTGTTTGCTTTAGGAATTAGCAGAGACAATTCGGCTAATGAATTGATGCACAACGAGACCTCGTGAACATGTATGATTGTACAAGTTGTTTTCCCTAATCCTTCTATTTTCATAAATATCTGTTAACCTTCCATAAAAAAAAGAGGCATAAACTTTTGTGCCATCTTATTAGGAACATCTCAGTGCTTCAGTGCTATGGAAGAGAAAGCATGGAAATTCGTTACTCCTTTCTAATCAAATATATTTTGTGGAATACACAATAACATATTAACTTTTCTGTTTGCATGTTGATCAAGGAAAAATCATCTAACCAAACTCCAAATAGAACAACATAATTTATTTTAGAACATTGCTATTAGTTCGTAAGCAGCTTTCTTATGTCAATTTTTGAAAGCGTTTGCGTCATTCAACTACCCATTGGCACAACATAGTTAAAGATGCTCATCTGATTTTATTGATAAAAATGACAACTGTCCCCGCTGCGTGCAGAGATGCAGAGAATAGGTGTCTGACAAAATTCAAGTGCCAAAGGCTCAGCCTGGCTCAGGCGAAATCCGCCATCATTTGCAGCCTGGTTTCTGCAGAGCCCTAAAACTGTCGCTGACTCACCTACTTGCTTGGCAACACCTCTAGTTTGATGTACAGAAGTAACTCTTTTTGACAAACCAGCAAATTGATCGTGTATGTACGGTCATATTCTGCTCCATTTGATGCCACCAAGGTCAACCGTTAATTTTCGTAAATCTGAAGTTCTGAACTTTGTCATCATGTCTCTTGGTGTGTGAATGCAGCAGGAATTAGAATTCCATGCCATGATGCTCTTGCCAAGCTGAATAATGTGTGTATTCAAGACTTCAAGGTTAATGCATG]
consensusID : consensus_10675#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence
[GGAAGAATGGCATACATGATGATATGCACCTCTGCTGCCTGTAAGTATCTGGTTGACGAATTGAGGACAAGTACTCGTGGCGGGAACTTTTGGTGATTGACCTTGCTTCATTCTGCTACCCATTAATATTGGAGCTGAAAATTGAGTATGGTATTATACCTTTCTTAGAATTACTCTTTTAGGCTCTACACATGATGTCATGTCGACCCCAACTTTTTTGCTGCCGTTATCACCATGCTCTTACACAGTAAGCTTTATTACGTACTCTGTTATCGGTTTGAATTGTTCCGGGAAAACACAACTTCGCTCTATGAACATTTAACTGCGAAAAGGAACTCAATCTTTTACTCTTTTTTATAAATATTGAGATCCAAAATACTTCATCACGGCCGCCATATTTTTGTTATACTTATATTCCTCTATGGGGCGAGTAGTGAATACCGACTGCCGACTTTTACTTATCTATTATTCACGTCTATACACGTAGTGAGTTATCTCTAGAACGTGGCGCATTGATAAATAACGAATATTTAGATTAATAGGGAGGGATCTATCTATGTGAAAGTGTAGGATTGCTAAGTTGGTCGTTTTTGTTAGCCTATGTAGCTATGCCTTTGCGACGTGAAGCGACGTATTTTGCTAGTGAGCGACTACGTGGTTTTTGTAGCGGTTCGTGACAGTGGTAGTATATTGTCAATTCGTAAGGCATTCTTTATGAATGTTCATACCTCTGTGCATTGTCACATATCAACTTTATGTGTATCTTTACACTGCACTGTTAAATGGATCGAATGTAAGAAACCTAAGAAAATTTAGCGAGATA]
[+] EMBL CA757627 [GGAAGAATGGCATACATGATGATATGCACCTCTGCTGCCTGTAAGTATCTGGTTGACGAATTGAGGACAAGTACTCGTGGCGGGAACTTTTGGTGATTGACCTTGCTTCATTCTGCTACCCATTAATATTGGAGCTGAAAATTGAGTATGGTATTATACCTTTCTTAGAATTACTCTTTTAGGCTCTACACATGATGTCATGTCGACCCCAACTTTTTTGCTGCCGTTATCACCATGCTCTTACACAGTAAGCTTTATTACGTACTCTGTTATCGGTTTGAATTGTTCCGGGAAAACACAACTTCGCTCTATGAACATTTAACTGCGAAAAGGAACTCAATCTTTTACTCTTTTTTATAAATATTGAGATCCAAAATACTTCATCACGGCCGCCATATTTTTGTTATACTTATATTCCTCTATGGGGCGAGTAGTGAATACCGACTGCCGACTTTTACTTATCTATTATTCACGTCTATACACGTAGTGAGTTATCTCTAGAACGTGGCGCATTGATAAATAACGAATATTTAGATTAATAGGGAGGGATCTATCTATGTGAAAGTGTAGGATTGCTAAGTTGGTCGTTTTTGTTAGCCTATGTAGCTATGCCTTTGCGACGTGAAGCGACGTATTTTGCTAGTGAGCGACTACGTGGTTTTTGTAGCGGTTCGTGACAGTGGTAGTATATTGTCAATTCGTAAGGCATTCTTTATGAATGTTCATACCTCTGTGCATTGTCACATATCAACTTTATGTGTATCTTTACACTGCACTGTTAAATGGATCGAATGTAAGAAACCTAAGAAAATTTAGCGAGATA]
consensusID : consensus_10675#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 803 fasta sequence
[AAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCCACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTATGCTGACCGACAATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCACATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGAGAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAACTAGAACTCTAGAAGAATTTCCAGGAGGAATGGCATAGATGATGATATGCACCTCTGCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTTTTGGTGATTGACCTTGCTTCATTCTGCTACCCATTAATATTGTTGCTGAAAATTGTTTAGGTTATTATGCCTTTCTTAGAATTACTTTTTTTGGGTCTACAGAAGATGTTATGCAGACCCCCCTATTTTTATGCGGTTAATCACATGTACTTACACTTTAAGCATTCATTGTTGCTTGCTAAGGTAGGAATTCATAATGTAAACAAATCTTTCTGTTAGATCATTTCCTCTAAAAGGGAATTGAACTATTGTATACAAAAAAGTTTGAAGTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CB645117 [AAGGATATCACACCGCATACAGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGCTAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCCACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTATGCTGACCGACAATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCACATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGAGAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAACTAGAACTCTAGAAGAATTTCCAGGAGGAATGGCATAGATGATGATATGCACCTCTGCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTTTTGGTGATTGACCTTGCTTCATTCTGCTACCCATTAATATTGTTGCTGAAAATTGTTTAGGTTATTATGCCTTTCTTAGAATTACTTTTTTTGGGTCTACAGAAGATGTTATGCAGACCCCCCTATTTTTATGCGGTTAATCACATGTACTTACACTTTAAGCATTCATTGTTGCTTGCTAAGGTAGGAATTCATAATGTAAACAAATCTTTCTGTTAGATCATTTCCTCTAAAAGGGAATTGAACTATTGTATACAAAAAAGTTTG ]
[-] EMBL CA761642 [ TGACGTGCCACCCACCCCCTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCCCTTCAGCAAAGTTATGCTGGCCGACAATCTTAGGTCCCTCACAAAGCTTCCCTTGGGTGATGAACTGCCTCGCCCATTAACGACGTCGGCCAAGAACGATGATATGCGCTTTTTAACCCGATTTGAGCTGATGGAGAACCTGAGATTCCTTGCAAAGAACCCCAACTTTTCAAATGTTGCCCCGAATGATGGTAACTAGAACTCTAGAAGAATTTCCCGGAGGAATGGCATAGATGATGATTTGCCCCCCTGCTGCCTGTAAGTTTTTGGATGACGAATTGAGGGCAAGAACTCGTGGCGGGAACTTTTGGTGATTGACCCTGCTTCATTTTGCTACCCCTTAATATTGTTGCTGAAAATTGTTTAGGTTATTATGCCTTTTTTAGAATTACTTTTTTTGGGTTTACAGAAGATGTTTTGCAGCCCCCCCTATTTTTTTGCGGTTAATCCCATGTACTTACCCTTTAAGCATTCATTGTTGCTTGCTAAGGTAGGAATTCATAATGTAAACCAATCTTTTTGTTAGATCCTTTCCTTTAAAAGGGAATTGAACTTTTTTTTTCAAAAAAGTTTGAAGTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_10675#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 314 fasta sequence
[TTTTTTTTTTTTTTTTTTTTAATTTTCTTTTTTTTTTTTTTTGAACTTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAGGAAATGATCTAACAAAAAAATTTGTTTACATTATGAATTCCTACCTTAACAAGCAACAATGAATGTTTTTTTTGTAAGTACCTGTGATTAACCCCATAAAAATAGGGGGGTTTTTTTTTAATCTTCTGGAAACCCAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAATTTTCAGCAACAATTTTAATGGGTTCCAAAATGAAACAAGGGCAATCACCA]
[+] EMBL CF281080 [TTTTTTTTTTTTTTTTTTTTAATTTTCTTTTTTTTTTTTTTTGAACTTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAGGAAATGATCTAACAAAAAAATTTGTTTACATTATGAATTCCTACCTTAACAAGCAACAATGAATGTTTTTTTTGTAAGTACCTGTGATTAACCCCATAAAAATAGGGGGGTTTTTTTTTAATCTTCTGGAAACCCAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAATTTTCAGCAACAATTTTAATGGGTTCCAAAATGAAACAAGGGCAATCACCA]
consensusID : consensus_10675#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 274 fasta sequence
[TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACTTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAGGAAATGATCTAACAAAAAAATTTGGTTACCTTATGAATTCCTACCTTAACAAGCAACAATGAATGCTTAAAGGGGAAGTACATGTGATTAACCCCATAAAAATAGGGGGGGCTGCATAACATTTTTTGTAAACCCAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAATTTTCAGCAACA]
[+] EMBL CF281045 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAACTTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAGGAAATGATCTAACAAAAAAATTTGGTTACCTTATGAATTCCTACCTTAACAAGCAACAATGAATGCTTAAAGGGGAAGTACATGTGATTAACCCCATAAAAATAGGGGGGGCTGCATAACATTTTTTGTAAACCCAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAATTTTCAGCAACA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10675#0 TATAGCAGCATCCATGCCAGTGACCCCAGACACTGCTCATAATTCACTGTCTAATGACAG 60
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 GAGTGCCACTCCAGAGCCTCCAGTGGGCTCTGGCCTCAACCATGCTGGTTCTGAAATGTT 120
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TCAACCAACTGAAAGAAAGGGTAGATTAAAAGGTTCTGCACCACATGACACCTTGAGTAA 180
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TGCTGGAACTGCTGCCAGTGCTGGCATGGGTACATCTGTCTTGGTTCCTGTGAAGGCGAC 240
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 ACAATTCGAGTCCGGCAGTGCTATCACCCATACGAAGGACATCCCAAGACCAGCTGGTGA 300
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TATTTCCAATGCAATCATTTCTACTGGTACCCTGATCCCTCAGAAGGTGTCGCAGGTGAA 360
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 GCTTGTTAAGGACATCAGCCAACAAACGAACACCCAAAAGCTAGTTGGCTCTACTTCCAA 420
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TACAGGTGATCGCAACGATCCGATGATCTCTGCAAAGGTGCCTCAGCTCCAGTTAGTGAG 480
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 GGACACCACCCTCCAGATGGTCACTGGGAAGCCAGCTAGCATTGCCACCAGTGCAAGCCA 540
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TGGTACTGCTGTGCCGATCTCTCGGCAGGTGCCCTGGGTCAAGTTGGTGAAGGATGTCAC 600
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 CCCGCAGATGCTCACCTCGAGACTTGGCAGTGCTGCTGTCAAAGTTGACTATCGTACGGC 660
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TGTGGCGATCCCTCAGAAGTTGTCCCAGCTCAAGTTAGTCAAGGATATCACACCGCATAC 720
consensus_10675#2 ----------------------------------------AAGGATATCACACCGCATAC 20
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 AGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGC 780
consensus_10675#2 AGCCACCCAAAAGCCTGCCACGATTGCGGCGAAGGCCATTCACCAGAAGAAGCGGAAAGC 80
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 --------GGAAGAATGGCATACATG------ATGATATGCACCTCTGCTGCCTGTAAGT 46
consensus_10675#0 TAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCC 840
consensus_10675#2 TAACAGTGACCCTGGCGAGAGCCCACTGGCACGGCATAAGCCGACTATCAATGACGTGCC 140
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ATCTGGTTGACGAATTGAGGACAAGTACTCGTGGCGGGAACTTTTGGTGATTGACCTTGC 106
consensus_10675#0 ACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTAT 900
consensus_10675#2 ACCCAGCCCTTTTGAAAGATCATCAGTAAGCAGCATTCCGCATCACTTCAGCAAAGCTAT 200
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 TTCATTCTGCTACCCATTAATATTGGAGCTGAAAATTGAGTATGGTATTAT--ACCTTTC 164
consensus_10675#0 GCTGACCGACA-TCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCAC 959
consensus_10675#2 GCTGACCGACAATCTTAGGTCACTCACAAAGCTTCACTTGGCTGATGAACTGCCTCGCAC 260
consensus_10675#3 --------------TTTTTTTTTTTTTTTTTTTTAATTTTCTTTTTTTTTTTTTTTGAAC 46
consensus_10675#4 ---------------TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAC 45
consensus_10675#1 TTAGAATTACTCTTTTAGGCTCTACACATGATGTCATGTCGACCCCAACTTTTTTGCTGC 224
* * * * * *
consensus_10675#0 ATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGA 1019
consensus_10675#2 ATTAACAACGTCGACCAAGAACGATGATATGCGCTTCTTAACCCGATCTGAGCTGATGGA 320
consensus_10675#3 TTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAG--GAAATGATCTAACAAA 104
consensus_10675#4 TTCAAACTTTTTTGTATAAAAAAATTCAATTCCCTTTTAAAG--GAAATGATCTAACAAA 103
consensus_10675#1 CGTTATCACCATGCTCTTACACAGTAAGCTTTATTACGTACTCTGTTATCGGTTTGAATT 284
* * * * * * * * *
consensus_10675#0 GAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAA 1079
consensus_10675#2 GAACCTGAGATTCCTTGCAAAGAACCACAACTTTTCAAATGTTGCCACGAATGATGGTAA 380
consensus_10675#3 AAAATTTGTTTACATTATGAATTCCTAC----CTTAACAAGCAACAATGAATGTTTTTTT 160
consensus_10675#4 AAAATTTGGTTACCTTATGAATTCCTAC----CTTAACAAGCAACAATGAATGCTTAAAG 159
consensus_10675#1 GTTCCGGGAAAACACAACTTCGCTCTATGAACATTTAACTGCGAAAAGGAACTCAATCTT 344
* * * ** * * * ***
consensus_10675#0 CTAGAACTCTAGAAGAATTTCCAGG----AGGAATGGCATAGATGATGATATGCACCTCT 1135
consensus_10675#2 CTAGAACTCTAGAAGAATTTCCAGG----AGGAATGGCATAGATGATGATATGCACCTCT 436
consensus_10675#3 TGTAAGTACCTGTGATTAACCCCAT----AAAAATAG-------GGGGGTTTTTTTTTAA 209
consensus_10675#4 GGGAAGTACATGTGATTAACCCCAT----AAAAATAG-------GGGGGGCTGCATAACA 208
consensus_10675#1 TTACTCTTTTTTATAAATATTGAGATCCAAAATACTTCATCACGGCCGCCATATTTTTGT 404
* * * * *
consensus_10675#0 GCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTT-TTG 1194
consensus_10675#2 GCTGCCTGTAAGTTTCTGGATGACGAATTGAGGACAAGAACTCGTGGCGGGAACTT-TTG 495
consensus_10675#3 TCT-TCTGGAAACC-CAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAA-TTT 266
consensus_10675#4 TTT-TTTGTAAACC-CAAAAAAAGTAATTTTAAAAAAGGGCTAATAACCTAAACAA-TTT 265
consensus_10675#1 TATACTTATATTCCTCTATGGGGCGAGTAGTGAATACCGACTGCCGACTTTTACTTATCT 464
* * * * * * * * ** * ** *
consensus_10675#0 -TGGGTGCCCGTGCCATTTGCAGCAACTCTGGATTGTTCGGGTCTTTGGGGGAGGATTTT 1253
consensus_10675#2 GTGATTGACCTTGCTTCATTCTGCTACCC---ATTAATATTGTTGCTGAAAATTG--TTT 550
consensus_10675#3 TCAGCAACAATTTTAATGGGTTCCAAAATGAAACAAGGGCAATCACCA------------ 314
consensus_10675#4 TCAGCAACA--------------------------------------------------- 274
consensus_10675#1 ATTATTCACGTCTATACACGTAGTGAGTT---ATCTCTAGAA-CGTGGCGCATTGATAAA 520
consensus_10675#0 CCACTGTTACACCATACCATCAGATGTGGGGTGATGACATCAGCATGTCGAACGAAATCC 1313
consensus_10675#2 AGGTTATTATGCCTTTC--TTAGA---------ATTACTTT----TTTTGGG-------- 587
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 TAACGAATATTTAGATTAATAGGGAGGGATCTATCTATGTGAAAGTGTAGGATTGCTAAG 580
consensus_10675#0 TGGAAAAAAAACTCTA---TATGCAACTCTGGATTGTTCGGAGAGGATTTTCCACTGTTA 1370
consensus_10675#2 TCTACAGAAGATGTTA---TGCAGACCCCCCTATTTTT---ATGCGGTTAATCACATGTA 641
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 TTGGTCGTTTTTGTTAGCCTATGTAGCTATGCCTTTGCGACGTGAAGCGACGTATTTTGC 640
consensus_10675#0 CACCATACCATCAAATG--TGGGGTGATGACTGATGACATCAGCATGTGCAACGAAATCC 1428
consensus_10675#2 C-TTACACT-TTAAGCA--TTCATTGTTGCTTGCTAAGGTAGGAATTCATAATGTAA--- 694
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 TAGTGAGCGACTACGTGGTTTTTGTAGCGGTTCGTGACAGTGGTA-GTATATTGTCAATT 699
consensus_10675#0 TGGAAAAGAACTCTATATGGTGTGTATAATTTATAATATGCTGAAGGTAATCATAACTCT 1488
consensus_10675#2 ----ACAAATCTTTCTGT----TAGATCATTTCCTCTA----AAAGGGAATTG-AACTAT 741
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 CGT-AAGGCATTCTTTATGA-ATGTTCATACCTCTGTGCATTGTCACATATCA-ACTTTA 756
consensus_10675#0 TGTTTATAAATGCATGGCTCTGTTGACCTCTCCTCTCATAAGTACACAAAATTTTATGCA 1548
consensus_10675#2 TGTATACAAAAAAGT-------TTGAAGTTTTGTTAAAAAAAAAAAAAAAAAAAAAAAAA 794
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 TGTGTATCTTTACACTGCACTGTTAAATGGATCGAATGTAAGAAACCTAAGAAAATTTAG 816
consensus_10675#0 TTTTTATTTGGCAGTACTTGAGGTTTTCTTTTTCTGTTTAGGTTTAATTATTTATTTGTT 1608
consensus_10675#2 AAAAAAAAA--------------------------------------------------- 803
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 CGAGATA----------------------------------------------------- 823
consensus_10675#0 ATTTATGTTAATTTCTTAATTTCCAGTTTGCTAAATTGATACAAGCTCAGAAGCTCATCA 1668
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TGCCATGCAAGATCTGATTGAATGCTTCTGATACTCATTCTTCAATCAAACTGTTCATAG 1728
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TTCATACATTAAATATCTGCGTGTTTGCTTTAGGAATTAGCAGAGACAATTCGGCTAATG 1788
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 AATTGATGCACAACGAGACCTCGTGAACATGTATGATTGTACAAGTTGTTTTCCCTAATC 1848
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 CTTCTATTTTCATAAATATCTGTTAACCTTCCATAAAAAAAAGAGGCATAAACTTTTGTG 1908
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 CCATCTTATTAGGAACATCTCAGTGCTTCAGTGCTATGGAAGAGAAAGCATGGAAATTCG 1968
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TTACTCCTTTCTAATCAAATATATTTTGTGGAATACACAATAACATATTAACTTTTCTGT 2028
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TTGCATGTTGATCAAGGAAAAATCATCTAACCAAACTCCAAATAGAACAACATAATTTAT 2088
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TTTAGAACATTGCTATTAGTTCGTAAGCAGCTTTCTTATGTCAATTTTTGAAAGCGTTTG 2148
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 CGTCATTCAACTACCCATTGGCACAACATAGTTAAAGATGCTCATCTGATTTTATTGATA 2208
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 AAAATGACAACTGTCCCCGCTGCGTGCAGAGATGCAGAGAATAGGTGTCTGACAAAATTC 2268
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 AAGTGCCAAAGGCTCAGCCTGGCTCAGGCGAAATCCGCCATCATTTGCAGCCTGGTTTCT 2328
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 GCAGAGCCCTAAAACTGTCGCTGACTCACCTACTTGCTTGGCAACACCTCTAGTTTGATG 2388
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TACAGAAGTAACTCTTTTTGACAAACCAGCAAATTGATCGTGTATGTACGGTCATATTCT 2448
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 GCTCCATTTGATGCCACCAAGGTCAACCGTTAATTTTCGTAAATCTGAAGTTCTGAACTT 2508
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 TGTCATCATGTCTCTTGGTGTGTGAATGCAGCAGGAATTAGAATTCCATGCCATGATGCT 2568
consensus_10675#2 ------------------------------------------------------------
consensus_10675#3 ------------------------------------------------------------
consensus_10675#4 ------------------------------------------------------------
consensus_10675#1 ------------------------------------------------------------
consensus_10675#0 CTTGCCAAGCTGAATAATGTGTGTATTCAAGACTTCAAGGTTAATGCATG 2618
consensus_10675#2 --------------------------------------------------
consensus_10675#3 --------------------------------------------------
consensus_10675#4 --------------------------------------------------
consensus_10675#1 --------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||