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Oryza sativa
cluster # 10697 cluster # 10697       Sequences # 8       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10697#0 length = 834 sequences # 4  
consensus_10697#1 length = 833 sequences # 1  
consensus_10697#2 length = 800 sequences # 1  
consensus_10697#3 length = 651 sequences # 1  
consensus_10697#4 length = 556 sequences # 1  

consensusID : consensus_10697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 834
fasta sequence
                              [AGAANAGTGGGAGGAGAGCAGGTAGAAGCAGAGCAGAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGCGTCTCCTAGGGTTTCTCGTGGCGCTCGGCTCGATGGCGATGGCGGTGGTGGCGGCGGCTTCCAGGGTTCAGGCGAGGCTGGCGGCGAGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGAAGGCTGCCGAGAACATCTACATCAAGAAAATGGAACAAGAGAAGCTGGAGAAGCTTGCACGCCAGGGTCCCAGCCCAGGAGAGCAAGGCTCATCTACTCCTGCCGCTGATGTGAAGGCCGAAGGTGG--CCC-AACT-GCT--GGTGCGTCGACCGTCAAGAACAAGAACTACA-CTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTG-CCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCGAACTAACTTGGGCCTTGCTGATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCACCTTATGCACCTGCAC-TACCTTTTGGAACTAAACTGAGGAAAACCATGTGACTATTTCGGGGGATGTAAGTAACACCAGACAAATGTTAGTTTTCGCGTAGTTTCTACCATATGCAATCTCATGATAGGCAA-AAATTTTTGTGCCGTTTGAACTCAGTTGCTGGGTGAGGTATAACTGCC-TTTTTTGGAGGGTGATCTTTTTGATCTGTACGGAGTAGAAGATTGTGCCCTTTTTGTCATAGCAACATTATTATCTGATGAGAGATATATATGAATGGAATGAATCAATGAATGATCTATA--AAAAAA]

[+] EMBL AU197776             [AGAANAGTGGGAGGAGAGCAGGTAGAAGCAGAGCAGAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGCGTCTCCTAGGGTTTCTCGTGGCGCTCGGCTCGATGGCGATGGCGGTGGTGGCGGCGGCTTCCAGGGTTCAGGCGAGGCTGGCGGCGAGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGAAGGCTGCCGAGAACATCTACATCAAGAAAATGGAACAAGAGAAGCTGGAGAAGCTTGCACGCCAGGGTCCCAGCCCAGGAGAGCAAGGCTCATCTACTCCTGCCGCTGATGTGAAGGCCGAAGGTGG  CCC AACT GCT  GGTGCGTCGACCGTCAAGAACAAGAACTACA CTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTG CCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCGAACTAACTTGGGCCTTGCTGATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCA                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU181591             [ agagAGTGGGAGGAGAGCAGGTAGAAGCAGAGCAGAGCAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGCGTCTCCTAGGGTTTCTCGTGGCGCTCGGCTCGATGGCGATGGCGGTGGTGGCGGCGGCTTCCAGGGTTCAGGCGAGGCTGGCGGCGAGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGAAGGCTGCCGAGAACATCTACATCAAGAAAATGGAACAAGAGAAGCTGGAGAAGCTTGCACGCCAGGGTCCCAGCCCAGGAGAGCAAGGCTCATCTACTCCTGCCGCTGATGTGAAGGCCGAAGGTGG  CCC AACT GCT  GGTGCGTCGACCGTCAAGAACAAGAACTACA CTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTG CCAGTGCCATAGCGTGGT                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BI806816             [                                                                                                                                                                                                                                                                                                                                       AGGCCGAAGGTGGGCCCCAAACTGGCTGGGGTGCGTCGACCGTCAAGAACAAGAACTACACCTCTCATCGCAGGT CTGTTGGTGTTCTAGGTGCCCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCGAACTAACTTGGGCCTTGCTGATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCACCTTATGCACCTGCAC TACCTTTTGGAACTAAACTGAGGAAAACCATGTGACTATTTCGGGGGATGTAAGTAACACCAGACAAATGTTAGTTTTCGCGTAGTTTCTACCATATGCAATCTCATGATAGGCAAGAAATTTTTGTGCCGTTTGAACTCAGTTGCTGGGTGAGGTATAACTGCC TTTTTTGGAGGGTGATCTTTTTGATCTGTACGGAGTAGAAGATTGTGCCCTTTTTGTCATAGCAACATTATTATCTGATGAGAGATATATATGAATGGAATGAATCAATGAATGATCTATATGAAAAAA]
[+] EMBL BI804903             [                                                                                                                                                                                                                                                                                                                                       aaGCCGAAGGTGG  CCC AACT GCT  GGTGCGTCGACCGTCAAGAACAAGAACTACACCTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTG CCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCGAACTAACTTGGGCCTTGCTGATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCACCTTATGCACCTGCACGTACCTTTTGGAACTAAACTGAGGAAAACCATGTGACTATTTCGGGGGATGTAAGTAACACCAGACAAATGTTAGTTTTCGCGTAGTTTCTACCATATGCAATCTCATGATAGGCAA CAATTTTTGTGCCGTTTGAACTCAGTTGCTGGGTGAGGTATAACTGCCTTTTTTTGGAGGGTGATCTTTTTGATCTGTACGGAGTAGAAGATTGTGCCCTTTTTGTCATAGCAACATTATTATCTGATGAGAGATATATATGAATGGAATGAATCAATGAATGATCTAAA  AAAAA ]


>consensus_10697#0 AGAANAGTGGGAGGAGAGCAGGTAGAAGCAGAGCAGAGCAGAGAGAGAGAGAGAGAGAGA GAGAGAGCAAGCGTCTCCTAGGGTTTCTCGTGGCGCTCGGCTCGATGGCGATGGCGGTGG TGGCGGCGGCTTCCAGGGTTCAGGCGAGGCTGGCGGCGAGGCTCGCACCGCGGCGGCTCC TCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGAAGGCTGCCGAGAACATCTACATCAAGA AAATGGAACAAGAGAAGCTGGAGAAGCTTGCACGCCAGGGTCCCAGCCCAGGAGAGCAAG GCTCATCTACTCCTGCCGCTGATGTGAAGGCCGAAGGTGGCCCAACTGCTGGTGCGTCGA CCGTCAAGAACAAGAACTACACTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTGCCAGTG CCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCGAACTAACTTG GGCCTTGCTGATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCACCTTATGCACCTG CACTACCTTTTGGAACTAAACTGAGGAAAACCATGTGACTATTTCGGGGGATGTAAGTAA CACCAGACAAATGTTAGTTTTCGCGTAGTTTCTACCATATGCAATCTCATGATAGGCAAA AATTTTTGTGCCGTTTGAACTCAGTTGCTGGGTGAGGTATAACTGCCTTTTTTGGAGGGT GATCTTTTTGATCTGTACGGAGTAGAAGATTGTGCCCTTTTTGTCATAGCAACATTATTA TCTGATGAGAGATATATATGAATGGAATGAATCAATGAATGATCTATAAAAAAA



consensusID : consensus_10697#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 833
fasta sequence
                              [GAGACGGAGGCCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCGGCGACCTGGTACGGCGGCGGGAGGGAGTCAATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCGCACCGTGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTATATCCACCCTACTCGCTTCCCTAATCTTCCTTCCCCCTCGTGATTGTTGCTGTTCTTGCTGCGGTAGATGGGCTACAGATGCAACTAGAGATGTATTGCTTGAGCTCTTCATAATTCATCAACACTTCATGACTGTTGAAACTGAATTGCATCTATACGTTATAAGTACTACTCCTAACCTGTAGAATTATCAATCTATGGCAATCAACCTCAATGAATTATCATCTGACCTGCAAGCAGAATGAGAAACCAATATAATATCATATAGCTGTAAGACATGATCTTTTGAACAAGAGACTTGCATTATGTAGTGTTTTATTTATCCATCACTTGAGCAGTTTTCACAATTCCTATATATCGAATGGTAAACTCTACTTCAACGTACTTTCAGAAAATATGAAATATATAAATGTTAACAGTAAGATGAAATCAAAAGTACTAATCTCCAATAGTCCATATATATCTGGATCATATCCACCTGAAATAAAAGATTACCACTTTTTTATGTACTGCAATTTGTAATTAGNCATTAAACATGTGCATGCTGCAAAAATATTCTACAAAAACAGGACTAGCCATCTTTCCCCTTTTCTTT]

[+] EMBL CB628053             [GAGACGGAGGCCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCGGCGACCTGGTACGGCGGCGGGAGGGAGTCAATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCGCACCGTGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTATATCCACCCTACTCGCTTCCCTAATCTTCCTTCCCCCTCGTGATTGTTGCTGTTCTTGCTGCGGTAGATGGGCTACAGATGCAACTAGAGATGTATTGCTTGAGCTCTTCATAATTCATCAACACTTCATGACTGTTGAAACTGAATTGCATCTATACGTTATAAGTACTACTCCTAACCTGTAGAATTATCAATCTATGGCAATCAACCTCAATGAATTATCATCTGACCTGCAAGCAGAATGAGAAACCAATATAATATCATATAGCTGTAAGACATGATCTTTTGAACAAGAGACTTGCATTATGTAGTGTTTTATTTATCCATCACTTGAGCAGTTTTCACAATTCCTATATATCGAATGGTAAACTCTACTTCAACGTACTTTCAGAAAATATGAAATATATAAATGTTAACAGTAAGATGAAATCAAAAGTACTAATCTCCAATAGTCCATATATATCTGGATCATATCCACCTGAAATAAAAGATTACCACTTTTTTATGTACTGCAATTTGTAATTAGNCATTAAACATGTGCATGCTGCAAAAATATTCTACAAAAACAGGACTAGCCATCTTTCCCCTTTTCTTT]


>consensus_10697#1 GAGACGGAGGCCCCGTCGGGCAGGCCGGCAGCGAGGCGGTGGCGGAGCCGCGGAGGCGGG CCGGCGTGGATGGGGTCGGTGGAGGTGGCGGCGACCTGGTACGGCGGCGGGAGGGAGTCA ATGCGAGGGGGTTCAGGCGAGGCTGGCGGCGTGGCTCGCACCGTGGCGGCTCCTCTCCTC CGGCGGCAAGGTGCTCGGCGAGGAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTATA TCCACCCTACTCGCTTCCCTAATCTTCCTTCCCCCTCGTGATTGTTGCTGTTCTTGCTGC GGTAGATGGGCTACAGATGCAACTAGAGATGTATTGCTTGAGCTCTTCATAATTCATCAA CACTTCATGACTGTTGAAACTGAATTGCATCTATACGTTATAAGTACTACTCCTAACCTG TAGAATTATCAATCTATGGCAATCAACCTCAATGAATTATCATCTGACCTGCAAGCAGAA TGAGAAACCAATATAATATCATATAGCTGTAAGACATGATCTTTTGAACAAGAGACTTGC ATTATGTAGTGTTTTATTTATCCATCACTTGAGCAGTTTTCACAATTCCTATATATCGAA TGGTAAACTCTACTTCAACGTACTTTCAGAAAATATGAAATATATAAATGTTAACAGTAA GATGAAATCAAAAGTACTAATCTCCAATAGTCCATATATATCTGGATCATATCCACCTGA AATAAAAGATTACCACTTTTTTATGTACTGCAATTTGTAATTAGNCATTAAACATGTGCA TGCTGCAAAAATATTCTACAAAAACAGGACTAGCCATCTTTCCCCTTTTCTTT



consensusID : consensus_10697#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 800
fasta sequence
                              [TCAATCCAATCTATCATACAATCTCAGATTCAAACCAACACATCTCGACAAACATCCAATACAACACAAAATTTACAACACAGTTAACAGCCAAATCTAGTCACATTCCAGATACAATCACAGTAACCAAAATTTCACCAGATGTCGCATGACCAAGATCTTCCAAGGGAGCTTAGCAGCAATGCTGCAATGTCAGGATTGGGAGGAGCTGTCTCCCTCTGTATGTTATCTCCACCTGCACATCGCACATTTCTGAAATTTTCAGTTCATCTCAGTTCAGCATTTTGTAACAAAGAAACTAAGCATGCTCAGAGATCAGGCAAAACAATATATATATATTTACCCCTTTTCACTGGGGAAATAATGGTTTTCACGCATGAGGGAGAGGCACCCTCAAATTTCCTTACTAAAGTAACAGTTATAGGTGAAAAAAACAACCCTACTTCCTGTCCTGCTACCAAATAAATAGCCCAGTTCTTCCGTGAACTCTGAAAAGATATTGAAATGCTTTTGCACTTGTACAGGGGAAAAATTGGTAAACAAAAAGAACTGCCAGCCCTGGTTTCTTCCTATTATCCCTTAATTTAAAAGGAAAAGACTGACATCATGCTCACAAATTTCCAAAAATTGGGTATAAACTAAGACATCTTAAACTGCAATGCAACTGCTTAGCATAGTATAACATGAGAAAGCACAGCCACAAGTTTGCTAGATAGCCAAAAAAAACCACTTCACATGTTAGGAAGAAACATGCCCCTACAATTTTGACATTCCTGAGCACCACATATGGTGGGCAACCA]

[+] EMBL CB628054             [TCAATCCAATCTATCATACAATCTCAGATTCAAACCAACACATCTCGACAAACATCCAATACAACACAAAATTTACAACACAGTTAACAGCCAAATCTAGTCACATTCCAGATACAATCACAGTAACCAAAATTTCACCAGATGTCGCATGACCAAGATCTTCCAAGGGAGCTTAGCAGCAATGCTGCAATGTCAGGATTGGGAGGAGCTGTCTCCCTCTGTATGTTATCTCCACCTGCACATCGCACATTTCTGAAATTTTCAGTTCATCTCAGTTCAGCATTTTGTAACAAAGAAACTAAGCATGCTCAGAGATCAGGCAAAACAATATATATATATTTACCCCTTTTCACTGGGGAAATAATGGTTTTCACGCATGAGGGAGAGGCACCCTCAAATTTCCTTACTAAAGTAACAGTTATAGGTGAAAAAAACAACCCTACTTCCTGTCCTGCTACCAAATAAATAGCCCAGTTCTTCCGTGAACTCTGAAAAGATATTGAAATGCTTTTGCACTTGTACAGGGGAAAAATTGGTAAACAAAAAGAACTGCCAGCCCTGGTTTCTTCCTATTATCCCTTAATTTAAAAGGAAAAGACTGACATCATGCTCACAAATTTCCAAAAATTGGGTATAAACTAAGACATCTTAAACTGCAATGCAACTGCTTAGCATAGTATAACATGAGAAAGCACAGCCACAAGTTTGCTAGATAGCCAAAAAAAACCACTTCACATGTTAGGAAGAAACATGCCCCTACAATTTTGACATTCCTGAGCACCACATATGGTGGGCAACCA]


>consensus_10697#2 TCAATCCAATCTATCATACAATCTCAGATTCAAACCAACACATCTCGACAAACATCCAAT ACAACACAAAATTTACAACACAGTTAACAGCCAAATCTAGTCACATTCCAGATACAATCA CAGTAACCAAAATTTCACCAGATGTCGCATGACCAAGATCTTCCAAGGGAGCTTAGCAGC AATGCTGCAATGTCAGGATTGGGAGGAGCTGTCTCCCTCTGTATGTTATCTCCACCTGCA CATCGCACATTTCTGAAATTTTCAGTTCATCTCAGTTCAGCATTTTGTAACAAAGAAACT AAGCATGCTCAGAGATCAGGCAAAACAATATATATATATTTACCCCTTTTCACTGGGGAA ATAATGGTTTTCACGCATGAGGGAGAGGCACCCTCAAATTTCCTTACTAAAGTAACAGTT ATAGGTGAAAAAAACAACCCTACTTCCTGTCCTGCTACCAAATAAATAGCCCAGTTCTTC CGTGAACTCTGAAAAGATATTGAAATGCTTTTGCACTTGTACAGGGGAAAAATTGGTAAA CAAAAAGAACTGCCAGCCCTGGTTTCTTCCTATTATCCCTTAATTTAAAAGGAAAAGACT GACATCATGCTCACAAATTTCCAAAAATTGGGTATAAACTAAGACATCTTAAACTGCAAT GCAACTGCTTAGCATAGTATAACATGAGAAAGCACAGCCACAAGTTTGCTAGATAGCCAA AAAAAACCACTTCACATGTTAGGAAGAAACATGCCCCTACAATTTTGACATTCCTGAGCA CCACATATGGTGGGCAACCA



consensusID : consensus_10697#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [GGGGTACGGCGGGATAAAAAATAGCGATATATTGGGGTGAGGGCAGGTTAACGAGTGCCCACAGAGAGAGAGACAGGGACAGAGACAGAGTGTGTTAGGAGAGCAAGGGTCATCTTCTCCTGGCCATAATGTGAAGGCCGAAGGTGGCCCAACTGCTGGTGCGTCGACTGTCAAGAACAAGAACTACACTCTCATCGCAGGTGCTGTTGGCGTTCTAGGTGCCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTCCGAGCTAACTTGGGCCCTGGTGATAGAGTTCCTGTCCAGGTTCTCCTTTCTTTGACTCACAGTATGCACCTGCACTACCTTTTGGAACTAAAGTGAGGAAAACCATGTGACCTATTTCGGGGGATGTAAGTAACACCAGGCAAATGTTAGTTTTGGCGTAGTTTTTACCATATGCAATCTCATGATAGGCAAGAAATTTTTGTGCCGTTTGAACTCAGTTTCTGGGTGAGGTATACCTGCCTTTTATGGAGGGTGATCTTTTTGATCTGTACGGAGTAGAAGAATGTGCCCTATTTGTTATAGCAACCTTATTATTTGATGAGAGATATATTTGAATGGAATGAATCAATGAAGCTTTTGTTTTGCAAAAAAAAAA]

[-] EMBL CA759957             [GGGGTACGGCGGGATAAAAAATAGCGATATATTGGGGTGAGGGCAGGTTAACGAGTGCCCACAGAGAGAGAGACAGGGACAGAGACAGAGTGTGTTAGGAGAGCAAGGGTCATCTTCTCCTGGCCATAATGTGAAGGCCGAAGGTGGCCCAACTGCTGGTGCGTCGACTGTCAAGAACAAGAACTACACTCTCATCGCAGGTGCTGTTGGCGTTCTAGGTGCCAGTGCCATAGCGTGGTATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTCCGAGCTAACTTGGGCCCTGGTGATAGAGTTCCTGTCCAGGTTCTCCTTTCTTTGACTCACAGTATGCACCTGCACTACCTTTTGGAACTAAAGTGAGGAAAACCATGTGACCTATTTCGGGGGATGTAAGTAACACCAGGCAAATGTTAGTTTTGGCGTAGTTTTTACCATATGCAATCTCATGATAGGCAAGAAATTTTTGTGCCGTTTGAACTCAGTTTCTGGGTGAGGTATACCTGCCTTTTATGGAGGGTGATCTTTTTGATCTGTACGGAGTAGAAGAATGTGCCCTATTTGTTATAGCAACCTTATTATTTGATGAGAGATATATTTGAATGGAATGAATCAATGAAGCTTTTGTTTTGCAAAAAAAAAA]


>consensus_10697#3 GGGGTACGGCGGGATAAAAAATAGCGATATATTGGGGTGAGGGCAGGTTAACGAGTGCCC ACAGAGAGAGAGACAGGGACAGAGACAGAGTGTGTTAGGAGAGCAAGGGTCATCTTCTCC TGGCCATAATGTGAAGGCCGAAGGTGGCCCAACTGCTGGTGCGTCGACTGTCAAGAACAA GAACTACACTCTCATCGCAGGTGCTGTTGGCGTTCTAGGTGCCAGTGCCATAGCGTGGTA TCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTCCGAGCTAACTTGGGCCCTGGTGATA GAGTTCCTGTCCAGGTTCTCCTTTCTTTGACTCACAGTATGCACCTGCACTACCTTTTGG AACTAAAGTGAGGAAAACCATGTGACCTATTTCGGGGGATGTAAGTAACACCAGGCAAAT GTTAGTTTTGGCGTAGTTTTTACCATATGCAATCTCATGATAGGCAAGAAATTTTTGTGC CGTTTGAACTCAGTTTCTGGGTGAGGTATACCTGCCTTTTATGGAGGGTGATCTTTTTGA TCTGTACGGAGTAGAAGAATGTGCCCTATTTGTTATAGCAACCTTATTATTTGATGAGAG ATATATTTGAATGGAATGAATCAATGAAGCTTTTGTTTTGCAAAAAAAAAA



consensusID : consensus_10697#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 556
fasta sequence
                              [GTCAATGCGAGGGGGTTAGGCAAGGGAGTCAATGCGAGGGAGTTCAGGCGAGGCTGGAGGCGTGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAGAAGGCTGCCGAGAACATCTACATCAAGAAATGTGCGATGCGCAGGTGGAGATAACATGCAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCAGTAACTGCATGAATATTTTTCATTCATCTATTAACTGCTTGAACAGTAGAAGAAACTAGGATGATATGGCAGTTATTGATGTTTTATCTAGCGCATATGCAGTGCTGCTAAGCTCACTTGGAAGATCTTGGTCATGCGACATCCGGTGAAATTTTGGTTACTGTGATTGTATTTGGAATGTCACTAGATTTGGCTGTTAACTGTGCTGTAAATTTTGTGTTGTATTGGATGTTTGTCGAGTTGTGTTGGTTTGAATCTGAGATGGCATGAGAAATTGGATTGAATTTGGTATGCTCAAATTTATTGGGCCTGTTTAGTGGGCTTTG]

[+] EMBL CB096954             [GTCAATGCGAGGGGGTTAGGCAAGGGAGTCAATGCGAGGGAGTTCAGGCGAGGCTGGAGGCGTGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAGAAGGCTGCCGAGAACATCTACATCAAGAAATGTGCGATGCGCAGGTGGAGATAACATGCAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCAGTAACTGCATGAATATTTTTCATTCATCTATTAACTGCTTGAACAGTAGAAGAAACTAGGATGATATGGCAGTTATTGATGTTTTATCTAGCGCATATGCAGTGCTGCTAAGCTCACTTGGAAGATCTTGGTCATGCGACATCCGGTGAAATTTTGGTTACTGTGATTGTATTTGGAATGTCACTAGATTTGGCTGTTAACTGTGCTGTAAATTTTGTGTTGTATTGGATGTTTGTCGAGTTGTGTTGGTTTGAATCTGAGATGGCATGAGAAATTGGATTGAATTTGGTATGCTCAAATTTATTGGGCCTGTTTAGTGGGCTTTG]


>consensus_10697#4 GTCAATGCGAGGGGGTTAGGCAAGGGAGTCAATGCGAGGGAGTTCAGGCGAGGCTGGAGG CGTGGCTCGCACCGCGGCGGCTCCTCTCCTCCGGCGGCAAGGTGCTCGGCGAGGAGGAGA AGGCTGCCGAGAACATCTACATCAAGAAATGTGCGATGCGCAGGTGGAGATAACATGCAG AGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACATCAGTAACTGCAT GAATATTTTTCATTCATCTATTAACTGCTTGAACAGTAGAAGAAACTAGGATGATATGGC AGTTATTGATGTTTTATCTAGCGCATATGCAGTGCTGCTAAGCTCACTTGGAAGATCTTG GTCATGCGACATCCGGTGAAATTTTGGTTACTGTGATTGTATTTGGAATGTCACTAGATT TGGCTGTTAACTGTGCTGTAAATTTTGTGTTGTATTGGATGTTTGTCGAGTTGTGTTGGT TTGAATCTGAGATGGCATGAGAAATTGGATTGAATTTGGTATGCTCAAATTTATTGGGCC TGTTTAGTGGGCTTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10697#0      ----------------------AGAANAGTGGGAGGAGAGCAGGTAGAAGCAGAGCAGAG 38
consensus_10697#3      ------------------------------------------------------------
consensus_10697#4      ------------------------------------------------------------
consensus_10697#1      ------------------------------GAGACGGAGGCCCCGTCGGGCAGGCCGGCA 30
consensus_10697#2      TCAATCCAATCTATCATACAATCTCAGATTCAAACCAACACATCTCGACAAACATCCAAT 60
                                                                                   

consensus_10697#0      CAGAGAGAGAGAGAGAGAGAGAGAGAGAGCAAGCGTCTCCTAGGGTTTCTCGTGGCGCT- 97
consensus_10697#3      ------------------------------------------------------------
consensus_10697#4      ---------------------------------------------------------GT- 2
consensus_10697#1      GCGAGGCGGTGGCGGAGCCGCGGAGGCGGGCCGGCGTGGATGGGGTCGGTGGAGGTGGCG 90
consensus_10697#2      ACAACACAAAATTTACAACACAGTTAACAGCCAAATCTAGTCACATT-CCAGATACAATC 119
                                                                                   

consensus_10697#0      -CGGCTCGATGGCGATGGCGGTGGTGGCGGCGGCTTCCAGGGTTCAGGCGAGGCTGGCGG 156
consensus_10697#3      ------------------------------------------------------------
consensus_10697#4      -CAATGCGAGGGGGTTAGGCAAGGGAGTCAATGCGAG-GGAGTTCAGGCGAGGCTGGAGG 60
consensus_10697#1      GCGACCTGGTACGGCGGCGGGAGGGAGTCAATGCGAG-GGGGTTCAGGCGAGGCTGGCGG 149
consensus_10697#2      ACAGTAACCAAAATTTCACCAGATGTCGCATGACCAAGATCTTCCAAGGGAGCTTAGCAG 179
                                                                                   

consensus_10697#0      CGAGGCTCGCACCGCGGCGGCTCC------TCTCCTCCGGCGGCAAGGTG-CTCGGCGAG 209
consensus_10697#3      ----------------------------------------------GGGG-TACGGCGGG 13
consensus_10697#4      CGTGGCTCGCACCGCGGCGGCTCC------TCTCCTCCGGCGGCAAGGTG-CTCGGCGAG 113
consensus_10697#1      CGTGGCTCGCACCGTGGCGGCTCC------TCTCCTCCGGCGGCAAGGTG-CTCGGCGAG 202
consensus_10697#2      CAATGCT-GCAATGTCAGGATTGGGAGGAGCTGTCTCCCTCTGTATGTTATCTCCACCTG 238
                                                                     *      *  *  *

consensus_10697#0      GAG---AAGGCTGCCGAGAACATCTACATCAAGAAA-ATGGAACAAGAGAAGCTGGAGAA 265
consensus_10697#3      ATA---AAAAATAGCGATA-TATTGGGGTGAGGGCA-GGTTAACGAGTGCCCACAGAGAG 68
consensus_10697#4      GAGGAGAAGGCTGCCGAGAACATCTACATCAAGA-A-ATGTGCGATGCGCAGGTGGAGA- 170
consensus_10697#1      GAGGAAAAGGCTGCCGAGAACATCTACATCAAGGTATATCCACCCTACTCGCTTCCCTAA 262
consensus_10697#2      CACATCGCACATTTCTGAAATTTTCAGTTCATCTCAGTTCAGCATTTTGTAACAAAGAAA 298
                                  *  *   *   *     * *    *                      * 

consensus_10697#0      GCTTGCACGC-CAGGGTCCCAGC---CCAGGAGAGCAAGGCTCATCTACTCCTGCCGCTG 321
consensus_10697#3      AGAGACAGGGACAGAGACAGAGTGTGTTAGGAGAGCAAGGGTCATCTTCTCCTGGCCATA 128
consensus_10697#4      --TAACATGCAGAGGGAGACAGCTCCTCCCGATCCTGACATTGCAGCATGTCCGTGACAT 228
consensus_10697#1      TCTTCCTTCCCCCTCGTGATTGT---TGCTGTTCTTG---CTGCGGTAGATGGGCTACAG 316
consensus_10697#2      CTAAGCATGCTCAGAGATCAGGCAAAACAATATATATATATTTACCCCTTTTCACTGGGG 358
                            *         *     *                   *                  

consensus_10697#0      ATGTGAAGG----C-CGAAGGTGGCCCAACTGCTGGTGCGTCGACCGTCAAGAACAAGAA 376
consensus_10697#3      ATGTGAAGG----C-CGAAGGTGGCCCAACTGCTGGTGCGTCGACTGTCAAGAACAAGAA 183
consensus_10697#4      CAGTAACTG----CATGAATATTTTTCATTCATCTATTAACTGCTTGAACAGTAGAAGAA 284
consensus_10697#1      ATGCAACTA----GAGATGTATTGCTTGAGCTCTTCATAATTCATCAACACTTCATGACT 372
consensus_10697#2      AAATAATGGTTTTCACGCATGAGGGAGAGGCACCCTCAAATTTCCTTACTAA-AGTAACA 417
                            *                                                      

consensus_10697#0      -CTACACTCTCATCGCAGGTGCTGTTGGTGTTCTAGGTGCCAG---TGCCATAGCG-TGG 431
consensus_10697#3      -CTACACTCTCATCGCAGGTGCTGTTGGCGTTCTAGGTGCCAG---TGCCATAGCG-TGG 238
consensus_10697#4      ACTAGGATGATATGGCAGTTATTGATGTTTTATCTAGCGCATA---TGCAGTGCTGCTAA 341
consensus_10697#1      GTTGAAACTGAATTGCATCTATACGTTATAAGTACTACTCCTAACCTGTAGAATTATCAA 432
consensus_10697#2      GTTATAGGTGAAAAAAACAACCCTACTTCCTGTCCTGCTACCA----AATAAATAGCCCA 473
                         *        *    *                                           

consensus_10697#0      TATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTGCG-AACTAACTTGGGCCTTGCTG 490
consensus_10697#3      TATCGCCTGTCAAAGCCTGAGAAGTCAGAAGAGGTTCCG-AGCTAACTTGGGCCCTGGTG 297
consensus_10697#4      GCTCACTTGGAAGATCTTG----GTCATGCGACATC-CG-GTGAAATTTTGGTTACTGTG 395
consensus_10697#1      TCTATGGCAATCAACCTCAATGAATTATCATCTGACCTGCAAGCAGAATGAGAAACCAAT 492
consensus_10697#2      GTTCTTCCGTGAACTCTGAAAAGATATTGAAATGCTTTTGCACTTGTACAGGGGA-AAAA 532
                         *            *        *                          *        

consensus_10697#0      ATAGAGTTCCTGTCCAGTTTCTCCTTTCTTTTACTCACCTTATGCACCTGCACTACCTTT 550
consensus_10697#3      ATAGAGTTCCTGTCCAGGTTCTCCTTTCTTTGACTCACAGTATGCACCTGCACTACCTTT 357
consensus_10697#4      ATTGTATT--TGGAATGTCACTAGATTTGGCTGTTAAC--TGTGC-TGTAAATTTTGTGT 450
consensus_10697#1      ATAATATC---ATATAGCTGTAAGACATGATCTTTTGAACAAGAGACTTGCATTATGTAG 549
consensus_10697#2      TTGGTAAACAAAAAGAACTGCCAGCCCTGGTTTCTTCC--TATTATCCCTTAATTTAAAA 590
                        *                                *                * *      

consensus_10697#0      TGGAACTAAACTGAGGA----AAACCATGT-GAC-TATTTCGGGGGATGTAAGTAACACC 604
consensus_10697#3      TGGAACTAAAGTGAGGA----AAACCATGT-GACCTATTTCGGGGGATGTAAGTAACACC 412
consensus_10697#4      TGTATTGGATGTTTGTC----GAGTTGTGTTGGTTTGAATCTGAGATGGCATGAGAAATT 506
consensus_10697#1      TGTTTTATTTATCCATCACTTGAGCAGTTTTCACAATTCCTATATATCGAATGGTAAACT 609
consensus_10697#2      GGAAAAGACTGACATCATGCTCACAAATTTCCAAAAATTGGGTATAAACTAAGACATCTT 650
                        *                    *    * *                    * *  *    

consensus_10697#0      AGACAAATGTTAGTTTTCGCGTAGTTTCTACCATATGCAATCTCATGATAGGCAA-AAAT 663
consensus_10697#3      AGGCAAATGTTAGTTTTGGCGTAGTTTTTACCATATGCAATCTCATGATAGGCAAGAAAT 472
consensus_10697#4      GGATTGAATTTGGTATGCTCA-AATTTAT------TGGGCCTGTTTAGTGGGCTTTG--- 556
consensus_10697#1      CTACTTCAACGTACTTTCAGAAAATATGAAATATATAAATGTTAACAGTAAGATGAAATC 669
consensus_10697#2      AAACTGCAATGCAACTGCTTAGCATA-GTATAACATGAGAAAGCACAGCCACAAGTTTGC 709
                                      *        *          *                        

consensus_10697#0      TTTTGTGCCGTTTGAACTCAGTTGCTGGGTGAGGTATAACTGCCTTTTTTGGAGGGTGAT 723
consensus_10697#3      TTTTGTGCCGTTTGAACTCAGTTTCTGGGTGAGGTATACCTGCCTTTTATGGAGGGTGAT 532
consensus_10697#4      ------------------------------------------------------------
consensus_10697#1      AAAAGTACTAATCTCCAATAGTCCATATATATCTGGATCATATCCACCTGAAATAAAAGA 729
consensus_10697#2      TAGATAGCCAAAAAAAACCACTTCACATGTTAGGAAGAAACATGCCCCTACAATTTTGAC 769
                                                                                   

consensus_10697#0      CTTTTTGATCTGTACGGAGTAGAAGATTGTGCCCTTTTTGTCATAGCAACATTATTATCT 783
consensus_10697#3      CTTTTTGATCTGTACGGAGTAGAAGAATGTGCCCTATTTGTTATAGCAACCTTATTATTT 592
consensus_10697#4      ------------------------------------------------------------
consensus_10697#1      TTACCACTTTTTTATGTACTGCAATTTGTAATTAGNCATTAAACATGTGCATGCTGCAAA 789
consensus_10697#2      ATTCCTGAGCACCACATATGGTGGGCAACCA----------------------------- 800
                                                                                   

consensus_10697#0      GATGAGAGATATATATGAATGGAATGAATCAATGAA-----TGATCTATAAAAAAA--- 834
consensus_10697#3      GATGAGAGATATATTTGAATGGAATGAATCAATGAAGCTTTTGTTTTGCAAAAAAAAAA 651
consensus_10697#4      -----------------------------------------------------------
consensus_10697#1      AATATTCTACAAAAACAGGACTAGCCATCTTTCCCCTTTTCTTT--------------- 833
consensus_10697#2      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)