These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10736#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2613 fasta sequence [AAAAAAAAAAAACTATTGCGTTACGTCCAACTCCCCCGGCGACGGTGGAAGCGGGAGCAGCCCGACGTCCTCGTCCGACTCCCCGGCGACGGTGGAAGCGGGAGCAGCAGCAGCCCGGCGTTGCTTCCGGCGGCATTACCTCCTCGTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCGGCGGCCGCGACGGGCATCGACCACTGGGAGTTCGCCTGCAGCTTGAGCAGGACCTTGTCCTGCGCCACGTGGAAGAGCGCTCCCACCTCCGCCCCGTCGCCGCCGCCGCTCGTCGTGGTGGGTAGGGGATTCACTGATTTGCTGCACTCTGTTTGCTCGGGGGATCGAGAGGGATAGGAGGAAGAGGAGTGGAGAGGAAGAAGGTAGAAGATGAGGGACAATTTGGTCCATAAAGATAGAAGATAAAAGGAATTTCGTCGAAGTAAAGCCCTCGCACCAACTTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC-CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGGTTGTTGTACCAGTTT-GTTTTGTTTG-ACACTCAAGTGTNGTTTAGATCACGGGGTGTAAGGTTTGGACGTATCACATCGGGTATTATATAGGATGTCGTATGGGGTGTTCGAACACAAGGAAAAAAAGTAACTACAGAATCTGTCAGTAAAAAAAAAA] [+] EMBL AK073990 [AAAAAAAAAAAACTATTGCGTTACGTCCAACTCCCCCGGCGACGGTGGAAGCGGGAGCAGCCCGACGTCCTCGTCCGACTCCCCGGCGACGGTGGAAGCGGGAGCAGCAGCAGCCCGGCGTTGCTTCCGGCGGCATTACCTCCTCGTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCGGCGGCCGCGACGGGCATCGACCACTGGGAGTTCGCCTGCAGCTTGAGCAGGACCTTGTCCTGCGCCACGTGGAAGAGCGCTCCCACCTCCGCCCCGTCGCCGCCGCCGCTCGTCGTGGTGGGTAGGGGATTCACTGATTTGCTGCACTCTGTTTGCTCGGGGGATCGAGAGGGATAGGAGGAAGAGGAGTGGAGAGGAAGAAGGTAGAAGATGAGGGACAATTTGGTCCATAAAGATAGAAGATAAAAGGAATTTCGTCGAAGTAAAGCCCTCGCACCAACTTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCTAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGG ] [+] EMBL CB626667 [ CCTCCTCCTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCG ] [+] EMBL AK120129 [ TTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAATAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCG ] [+] EMBL CB653350 [ AGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCANGCATGTGAGG ] [+] EMBL CF325582 [ TCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAAAAGACAGAACTGCAGGTGATCTC ] [-] EMBL CB626668 [ AGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTGCAAAACNCGTGTCTTATAGTAGACATTTTGGAA ] [+] EMBL CA756946 [ AACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAAT ATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTNCGGTTCCATGTCTGTTCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGTTTGTTGTACCAGTTTGGTTTTGTTTG ACACTCAAGTGTNGTTTAGATCACGGGGTGTAAGGTTTG ] [-] EMBL CB644238 [ GACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGGTTGTTGTACCAGTTT GTTTTGTTTGAACACTCAGGGGTTGTTTAGATTGAGGGGTGTAAAGTTTTGACGTATCACATCGGGTATTATATAGGATGTCGTATGGGGTGTTCGAACACAAGGAAAAAAAGTAACTACAGAATCTGTCAGTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||