These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10749#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1352 fasta sequence [CGCATTGGTCGGGGGAATTCGGGATAAGCTTCGAAGTCATTCATGGTCGCGCCAGCGACGCCGAGGCCGTCGCGGATCCTGCCGCGAGCGTCGCACTCCCACTCCCAGCCGGCCGCCGTCGGCCTCGCGTCCGACCGCGCCGCCGCCGCCACCGTCTCCTCCCGCCGCCGCCGCAACTTCGTCTTCGTCGTCAACCCCTCCGGCGCCAATGGCCGCACGGGCAACCAGTGGAAGCAGCTGCTCCCGCACCTCCGCACCCGCTTCGCTGACCAATGCGATATTTGTGAGTGCATCACCTCGGCCCCGTTCGACGCCATAGATATCACGAGGGAGGCTGTAAAGGATGGGGCTGATGCCGTGATTGCTGTTGGTGGTGATGGAACACTTCATGAGGTCGTCAATGGCTTCTTCTGTAAGGGAAGTCCTGTCCATGCTCTTGATCAAGGACCTGATCATTCCACAGCGCTTGGTCTCATTCCACTTGGAACTGGTTCAGACTTTGCAAGGACATTTGGCTGGACAAATGATCCTCATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGACTGGTGTGTCATCGATAAGAGTTCAGTCGATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGTATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGTGATAT-CGTAATTGAATAGTTACATTCATTTTCTGGCAATACATGGGATAAAATCTGTTGTCACCCGCCATGTAATGACTATAATTATATGCAACATTTGCTAATCAAACTACCATAAAAATTTGGTGGTGACGGTGCAAAAAAAAAAG] [+] EMBL AK101342 [CGCATTGGTCGGGGGAATTCGGGATAAGCAGCGAAGTCATTCATGGTCGCGCCAGCGACGCCGAGGCCGTCGCGGATCCTGCCGCGAGCGTCGCACTCCCACTCCCAGCCGGCCGCCGTCGGCCTCGCGTCCGACCGCGCCGCCGCCGCCACCGTCTCCTCCCGCCGCCGCCGCAACTTCGTCTTCGTCGTCAACCCCTCCGGCGCCAATGGCCGCACGGGCAACCAGTGGAAGCAGCTGCTCCCGCACCTCCGCACCCGCTTCGCTGACCAATGCGATATTTGTGAGTGCATCACCTCGGCCCCGTTCGACGCCATAGATATCACGAGGGAGGCTGTAAAGGATGGGGCTGATGCCGTGATTGCTGTTGGTGGTGATGGAACACTTCATGAGGTCGTCAATGGCTTCTTCTGTAAGGGAAGTCCTGTCCATGCTCTTGATCAAGGACCTGATCATTCCACAGCGCTTGGTCTCATTCCACTTGGAACTGGTTCAGACTTTGCAAGGACATTTGGCTGGACAAATGATCCTCATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGACTGGTGTGTCATCGATAAGAGTTCAGTCGATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGTATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGTGATAT CGTAATTGAATAGTTACATTCATTTTCTGGCAATACATGGGATAAAATCTGTT ] [+] EMBL CB646182 [ GGAT ACCTTCGAAGTCATTCATGGTCGCGCCAGCGACGCCGAGGCCGTCGCGGATCCTGCCGCGAGCGTCGCACTCCCACTCCCAGCCGGCCGCCGTCGGCCTCGCGTCCGACCGCGCCGCCGCCGCCACCGTCTCCTCCCGCCGCCGCCGCAACTTCGTCTTCGTCGTCAACCCCTCCGGCGCCAATGGCCGCACGGGCAACCAGTGGAAGCAGCTGCTCCCGCACCTCCGCACCCGCTTCGCTGACCAATGCGATATTTGTGAGTGCATCACCTCGGCCCCGTTCGACGCCATAGATATCACGAGGGAGGCTGTAAAGGATGGGGCTGATGCCGTGATTGCTGTTGGTGGTGATGGAACACTTCATGAGGTCGTCAATGGCTTCTTCTGTAAGGGAAGTCCTGTCCATGCTCTTGATCAAGGACCTGATCATTCCACAGCGCTTGGTCTCGTTCCACTTGGAACTGGTTCAGACTTTGCAAGGACATTTGGCTGGACAAATGATCCTCATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAAATCTTAGAATAAAGGTAAATGGTGGA ] [+] EMBL CB646185 [ GGATACGCTTCGAAGTCGTTCATGGTCGCGCCAGCGACGCCGAGGCCGTCGCGGATCCTGCCGCGAGCGTCGCACTCCCACTCCCAGCCGGCCGCCGTCGGCCTCGCGTCCGACCGCGCCGCCGCCGCCACCGTCTCCTCCCGCCGCCGCCGCAACTTCGTCTTCGTCGTCAACCCCTCCGGCGCCAATGGCCGCACGGGCAACCAGTGGAAGCAGCTGCTCCCGCACCTCCGCACCCGCTTCGCTGACCAATGCGATATTTGTGAGTGCATCACCTCGGCCCCGTTCGACGCCATAGATATCACGAGGGAGGCTGTAAAGGATGGGGCTGATGCCGTGATTGCTGTTGGTGGTGATGGAACACTTCATGAGGTCGTCAATGGCTTCTTCTGTAAGGGAAGTCCTGTCCATGCTCTTGATCAAGGACCTGATCATTCCACAGCGCTTGGTCTCATTCCACTTGGAACTGGTTCAGACTTTGCAAGGACATTTGGCTGGACAAATGATCCTCATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCACAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGG ] [+] EMBL CB645956 [ AGGCCGTCGCGGATCCTGCCGCGAGCGTCGCACTCCCACTCCCAGCCGGCCGCCGTCGGCCTCGCGTCCGACCGCGCCGCCGCCGCCACCGTCTCCTCCCGCCGCCGCCGCAACTTCGTCTTCGTCGTCAACCCCTCCGGCGCCAATGGCCGCACGGGCAACCAGTGGAAGCAGCTGCTCCCGCACCTCCGCACCCGCTTCGCTGACCAATGCGATATTTGTGAGTGCATCACCTCGGCCCCGTTCGACGCCATAGATATCACGAGGGAGGCTGTAAAGGATGGGGCTGATGCCGTGATTGCTGTTGGTGGTGATGGAACACTTCATGAGGTCGTCAATGGCTTCTTCTGTAAGGGAAGTCCTGTCCATGCTCTTGATCAAGGACCTGATCATTCCACAGCGCTTGGTCTCATTCCACTTGGAACTGGTTCAGACTTTGCAAGGACATTTGGCTGGACAAATGATCCTCATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGAT ] [-] EMBL CB646413 [ ATGAGGCGATTGATCGAATTGTGAGAGGAGTCAAATCAAAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGACTGGTGTGTCATCGATAAGAGTTCAGTCGATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGTATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGTGATAT CGTAATTGAATAGTTACATTCAaaaaaaaag ] [-] EMBL CB646183 [ AAACTAGATATAGGTATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGACTGGTGTGTCATCGATAAGAGTTCAGTCGATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGTATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGTGATAT CGTAATTGAATAGTTACATTCATTTTCTGGCAATACATGGGATAAAATCTGTTGTCACCCGCCATGTAATGACTATAATTATATGCAACATTTGCTAATCAAACTACCATAAAAATTTGGTGGTGACGGTGCAAAAAAAAAAG] [-] EMBL CB646186 [ ATGATGGAAGGCCCAGATGGAAACCCACATTATTTTGTTAATGTTGCTGATATCCATTTGAGTGCTAAGGCGGGTTATTTTTCTTCTATGTACAAGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGACTGGTGTGTCATCGATAAGAGTTCAGTCGATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGTATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGTGATAT CGTAATTGAATAGTTACATTCATTTTCTGGCAATACATGGGATAAAATCTGTTGTCACCCGCCATGTAATGACTATAATTATATGCAACATTTGCTAATCGAACTACCATAAAAATTTGGTGGTGACGGTGCAAAAAAAAAga] [+] EMBL CA766061 [ aaggggGAGATTTGGCAACTTATGCTATGTTTTTGGAGCGCTCAGAGCCTTTTGGGGACATAGTAATCGAGATCTTAGAATAAAGGTAAATGGTGGAGAATGGAAAACCATTCGTAAAGTCACTGCACTATGCATAGGAAATGCCAAATACTTCGGCGGTGGTATGAAGATCACTCCAACAGCTGATCCTTTCGGGGGTGACCTTGAGGTCGTTATTCTTCAAGATTTCAAATGGCATGATTTCCTGCTCAAGCTTCATAGATTGTATGGAGGAACTCATCTATCAGTGAATGGTGTGTCATCGATAAGAGTTCAGTCAATTGAAGTAGCAGAAAAGGAAGTTAGTGCTGACATCTTTGTGCAATCTGATGGGGAGCATTTTGGTTTTCTTCCAACCAAATTTTCAGTTCTTCCCGGTGCAGTTGATTTCTTCTGCTAGATTAGCATGCTTCTTCCTGTGGGATACAAAGGTTTCTTAATCCTTGTCAAGTCACTACGTGTACTTTGAACTAGCTGTGTTATTTTGAAGNGATATCCGNAATTGAATAGTTA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||