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Oryza sativa
cluster # 10801 cluster # 10801       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10801#0 length = 1953 sequences # 7  
consensus_10801#1 length = 488 sequences # 1  

consensusID : consensus_10801#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1953
fasta sequence
                              [AGTTGCCCCTTGATGTCATTTCTTGCTTGACCATTTCTGACAGATGCATATTTTGGATTTCCTGCATATATGTCTCAATTTACAGGAAACTTCCAGAGGAAATTATAGATCAACTGGAATTTCTTAAGGATTTACCTAATTCGTTAGTATGGTCTCCTATTGAACTTACAGTAGATAACAGAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATGAAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACCACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGTATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAAAGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAGAGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATATCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATATTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCATCAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTTGGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTGCTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAACATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAACCTTCAGTCTTATCAGTGGTTATCTTGTAGATCAACGGAACTTGCCCGTGAGGGATCTGCTGTCAAGAAGGTTTATGAAGAATGTTAAGAAGCACAGGCTTAAGCGGTTGATAGATGAGACTATAGGCCCAACTTCCGCGAATCCTGCTCTGATAAACTCTGTCCTCGAGGTGTGCTACGGTCCATCTCTCCTTCCAGAAACGATAGGTGAAGTTAAGTACCTGGTCGATTTTGTTGAATCAGTGATGGAGGTTCTTCCTGCAAACTACCGTCTGGCCTTGGCGGTTGGTAAATTCATGGTTAAGCATTGCACAGGTGATGACTCTATTTCCATGGGCACCCGATTCTGGGCCAGCTCCATTCTGATCAACGCCATTTTCCGAGCTGTTCCTGTCGCACCAGAATCAGTATGGTTAGAAGGTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGGCAA-CCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGGCCAGTGGGAGCAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGAGCGTAACGCCTCCCTAGCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCA-GGTGGAGCTGTAGTTAGTGTTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGATGGGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGGCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCAAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACAGAGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTTGAAACATTATGA-TCGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAAGGA]

[+] EMBL CB670125             [AGTTGCCCCTTGATGTCATTTCTTGCTTGACCATTTCTGACAGATGCATATTTTGGATTTCCTGCATATATGTCTCAATTTACAGGAAACTTCCAGAGGAAATTATAGATCAACTGGAATTTCTTAAGGATTTACCTAATTCGTTAGTATGGTCTCCTATTGAACTTACAGTAGATAACAGAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATGAAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACCACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGTATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAAAGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAGAGGTGCAAGGAATTCAATATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATATCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATATTCAAAGTGGTGGTGCTACTACACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCATCAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTTGGCTATTAAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK059552             [                                                                                                                                                         CTCCTATTGAACTTACAGTAGATAACAGAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATGAAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACCACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGTATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAAAGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAGAGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATATCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATATTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCATCAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTTGGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTGCTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAACATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAACCTTCAGTCTTATCAGTGGTTATCTTGTAGATCAACGGAACTTGCCCGTGAGGGATCTGCTGTCAAGAAGGTTTATGAAGAATGTTAAGAAGCACAGGCTTAAGCGGTTGATAGATGAGACTATAGGCCCAACTTCCGCGAATCCTGCTCTGATAAACTCTGTCCTCGAGGTGTGCTACGGTCCATCTCTCCTTCCAGAAACGATAGGTGAAGTTAAGTACCTGGTCGATTTTGTTGAATCAGTGATGGAGGTTCTTCCTGCAAACTACCGTCTGGCCTTGGCGGTTGGTAAATTCATGGTTAAGCATTGCACAGGTGATGACTCTATTTCCATGGGCACCCGATTCTGGGCCAGCTCCATTCTGATCAACGCCATTTTCCGAGCTGTTCCTGTCGCACCAGAATCAGTATGGTTAGAAGGTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGGCAA CCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGGCCAGTGGGAGCATCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGAGCGTAACGCCTCCCTAGCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCA GGTGGAGCTGTAGTTAGTGTTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGATGGGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGGCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCAAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACAGAGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTTGAAACATTATGA TCGATCAATCATGAATGTGAATGA                   ]
[+] EMBL CB656146             [                                                                                                                                                                         AGTAGATAACAGAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATGAAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACCACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGTATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAAAGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAGAGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATATCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATATTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCATCAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTTGGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTGCTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAACATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAACCTTCAGTCTTATCAGTGGTTATCTTGTAGATnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB682742             [                                                                                                                                                                                                                                                      TTAACATTGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACCACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGTATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAAAGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAGAGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATATCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATATTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCATCAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTTGGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTGCTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAACATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAACCTTCAGTCTTATCAGTGGTTATCTTGTAGATCAACGGAACTTGCCCGTGAGGGATCTGCTGTCAAGAAGGTTTATGAAGAATGTTAAGAAGCACAGGCTTAAGCGGTTGATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB656147             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTAAGCATTGCACAGGTGATGACTCTATTTCCATGGGCACCCGATTCTGGGCCAGCTCCATTCTGATCAACGCCATTTTCCGAGCTGTTCCTGTCGCACCAGAATCAGTATGGTTAGAAGGTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGGCAA CCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGGCCAGTGGGAGCAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGAGCGTAACGCCTCCCTAGCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCA GGTGGAGCTGTAGTTAGTGTTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGATGGGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGGCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCAAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACAGAGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTTGAAACATTATGA TGGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAAGG ]
[-] EMBL CB670126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTATGGTTAGAAGGTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGGCAA CCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGGCCAGTGGGAGCAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGAGCGTAACGCCTCCCTAGCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCA GGTGGAGCTGTAGTTAGTGTTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGATGGGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGGCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCAAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACAGAGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTTGAAACATTAAGAGTGGATCAATCATGAATGTGAATGAGAATTTTG           ]
[+] EMBL BI811791             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              acaAGGCAACCCTCAGTCTACCCGGTCCCCTTCAA CTATGCCACTCTTACGTGAACTCCTGTAA GCCAGTGGGA CAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGA CTGAGCGTAACGCCTCCCTACCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCACGGTGGA CTGTAGTTAGT TTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGAT GGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGCCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCCAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACCGAGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCAC ACTGTTGTTTTTTTGAAACATTATGA TCGATC ATCATGAATGTGAATGAGAATTTTGTTAAAccaaaa]


>consensus_10801#0 AGTTGCCCCTTGATGTCATTTCTTGCTTGACCATTTCTGACAGATGCATATTTTGGATTT CCTGCATATATGTCTCAATTTACAGGAAACTTCCAGAGGAAATTATAGATCAACTGGAAT TTCTTAAGGATTTACCTAATTCGTTAGTATGGTCTCCTATTGAACTTACAGTAGATAACA GAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATG AAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACC ACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGT ATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAA AGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAG AGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATA TCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATA TTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCAT CAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTT GGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTG CTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAAC ATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAA CCTTCAGTCTTATCAGTGGTTATCTTGTAGATCAACGGAACTTGCCCGTGAGGGATCTGC TGTCAAGAAGGTTTATGAAGAATGTTAAGAAGCACAGGCTTAAGCGGTTGATAGATGAGA CTATAGGCCCAACTTCCGCGAATCCTGCTCTGATAAACTCTGTCCTCGAGGTGTGCTACG GTCCATCTCTCCTTCCAGAAACGATAGGTGAAGTTAAGTACCTGGTCGATTTTGTTGAAT CAGTGATGGAGGTTCTTCCTGCAAACTACCGTCTGGCCTTGGCGGTTGGTAAATTCATGG TTAAGCATTGCACAGGTGATGACTCTATTTCCATGGGCACCCGATTCTGGGCCAGCTCCA TTCTGATCAACGCCATTTTCCGAGCTGTTCCTGTCGCACCAGAATCAGTATGGTTAGAAG GTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGG CAACCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGG CCAGTGGGAGCAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGA GCGTAACGCCTCCCTAGCAGGGGCCCTCTTGGTTTGATGACGTGGCGATTCGCCAGGTGG AGCTGTAGTTAGTGTTGTGTTTACTGGAAAGTGAGAGTAGATACACCCGGTGGTGATGGG GCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGTGACACATAGGCGGTGGATA CCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGATCAAAA AAAGAGGATATAGGCATACGGTTTTGCATGCCCCCACAGAGTGGAGTTTTGGCTGACTCG AGAGTATGATGTTTTTGTAGGCAGATTTCTTGATCTGTTTCAGGTTTATGTTTGTTTACC CTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTTGAAACATTATGATCGATCAATC ATGAATGTGAATGAGAATTTTGTTAAAAAAGGA



consensusID : consensus_10801#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence
                              [GTCATACGGGGCATTCGAGTCTGGAGCTGTAACCGCTCTCCCCTAACGCAGGGCCCCTTCTTGTGGTTTGTGGATGGACCGTGGCCGATTTCCCCAAGGGGTGGGGACCATGTTAGTTTAAGTTTGTTTTACTGGAAAGTGAGAGTAGATACACCCGTGTGATGGGCGACTGGATAATTTTCTTCTTGTTTAGCCACAGTTTAGTGACACATAGCCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGGATCAAAAAAAGAGGATATAGCCATACGGTTTTGCATGCCCCACACAGAGTGGATTTTGCTGACTCGAGAGTATGATTTTTGTAGCCAAGATTTCTTGATCTTTTCAGTTTATTTTGTTTACCCTTTCCAGTGTATGCATGCACAACTGTTGTTTTTTGGAACATTATGGATCGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAA]

[+] EMBL BI813230             [GTCATACGGGGCATTCGAGTCTGGAGCTGTAACCGCTCTCCCCTAACGCAGGGCCCCTTCTTGTGGTTTGTGGATGGACCGTGGCCGATTTCCCCAAGGGGTGGGGACCATGTTAGTTTAAGTTTGTTTTACTGGAAAGTGAGAGTAGATACACCCGTGTGATGGGCGACTGGATAATTTTCTTCTTGTTTAGCCACAGTTTAGTGACACATAGCCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGGATCAAAAAAAGAGGATATAGCCATACGGTTTTGCATGCCCCACACAGAGTGGATTTTGCTGACTCGAGAGTATGATTTTTGTAGCCAAGATTTCTTGATCTTTTCAGTTTATTTTGTTTACCCTTTCCAGTGTATGCATGCACAACTGTTGTTTTTTGGAACATTATGGATCGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAA]


>consensus_10801#1 GTCATACGGGGCATTCGAGTCTGGAGCTGTAACCGCTCTCCCCTAACGCAGGGCCCCTTC TTGTGGTTTGTGGATGGACCGTGGCCGATTTCCCCAAGGGGTGGGGACCATGTTAGTTTA AGTTTGTTTTACTGGAAAGTGAGAGTAGATACACCCGTGTGATGGGCGACTGGATAATTT TCTTCTTGTTTAGCCACAGTTTAGTGACACATAGCCGGTGGATACCAACCATACCATACA TCACAGCAGCTGCTGTTACTGATGGTGTGACTTATGGGATCAAAAAAAGAGGATATAGCC ATACGGTTTTGCATGCCCCACACAGAGTGGATTTTGCTGACTCGAGAGTATGATTTTTGT AGCCAAGATTTCTTGATCTTTTCAGTTTATTTTGTTTACCCTTTCCAGTGTATGCATGCA CAACTGTTGTTTTTTGGAACATTATGGATCGATCAATCATGAATGTGAATGAGAATTTTG TTAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10801#0      AGTTGCCCCTTGATGTCATTTCTTGCTTGACCATTTCTGACAGATGCATATTTTGGATTT 60
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CCTGCATATATGTCTCAATTTACAGGAAACTTCCAGAGGAAATTATAGATCAACTGGAAT 120
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TTCTTAAGGATTTACCTAATTCGTTAGTATGGTCTCCTATTGAACTTACAGTAGATAACA 180
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      GAAGTCAGATTTTAGTACTATTGAACTATGCTGCTGGTAAGATTGCTGTAGATATTAATG 240
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      AAACGGTTAAAAACGGGGATCCATCTTACCTGAGGCTCTCACAATTCCTCGCTGTTAACC 300
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      ACATTAATTGTCTAGCTACTCTTGAAGGCTTCCAATCTTGTGCTAATCTGCTGGTGAAGT 360
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      ATATGGAGGAGTATCCAATGTGTCCTCATATTCTTGTTTTCTCAGCTCGGCTACATAGAA 420
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      AGTACGGTTCATGTCCTGGTCTGAAAGGATTTGATGAATTGCTCCTGGGTTGGCCTAAAG 480
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      AGGTGCAAGGAATTCAGTATCTGTGGAACCAATGTGCTGAGCATGCTCTGGCAGATAATA 540
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TCGAGCTAGCTGAGAAGTTGCTGACTCGCTGGTTTGAAGAATATGGAAAAGATGGTGATA 600
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TTCAAAGTGGTGGTGCTACTAGACCAATGGAGATCAGCAATGAAGAGTCTGTACGGTCAT 660
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CAGTTTCCTCTATACAAGAAGTTGGTTCTGGTACATCTACATCAGAGGATCAAATCTTTT 720
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      GGCTATTAAACCTCTCATTATACAGGACGATAGAGAACAATCTACAGGAAGCAAAAGTTG 780
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CTATGGACAAAGCATTGAAGTTAGCACATGGGGAGAGCTATGAGCACTGTATAAAGGAAC 840
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      ATGCTGCAATTCACACACTGGAGAAAACGTCATCATCTACAGATGTTCAAACTCAAGCAA 900
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CCTTCAGTCTTATCAGTGGTTATCTTGTAGATCAACGGAACTTGCCCGTGAGGGATCTGC 960
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TGTCAAGAAGGTTTATGAAGAATGTTAAGAAGCACAGGCTTAAGCGGTTGATAGATGAGA 1020
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CTATAGGCCCAACTTCCGCGAATCCTGCTCTGATAAACTCTGTCCTCGAGGTGTGCTACG 1080
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      GTCCATCTCTCCTTCCAGAAACGATAGGTGAAGTTAAGTACCTGGTCGATTTTGTTGAAT 1140
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CAGTGATGGAGGTTCTTCCTGCAAACTACCGTCTGGCCTTGGCGGTTGGTAAATTCATGG 1200
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TTAAGCATTGCACAGGTGATGACTCTATTTCCATGGGCACCCGATTCTGGGCCAGCTCCA 1260
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      TTCTGATCAACGCCATTTTCCGAGCTGTTCCTGTCGCACCAGAATCAGTATGGTTAGAAG 1320
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      GTGCCAGTCTCCTTGAGAAACTTCAGGCAGCAGAGACCGTGAAGAGATTCTACCAGCAGG 1380
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CAACCTCAGTCTACCCGTTCTCCTTCAAGCTATGGCACTCTTACTTGAACTCCTGTAAGG 1440
consensus_10801#1      ------------------------------------------------------------
                                                                                   

consensus_10801#0      CCAGTGGGAGCAGCACAGAGAGCATCGCCGAAGCTGCGAGGCAACGGGGCATCGAGCTGA 1500
consensus_10801#1      ------------------------------GTCATACGGGGCATTCGAGTCTGGAGCTGT 30
                                                         * ** ****   * *  * ****** 

consensus_10801#0      GCGTAACGCCTCCCTA--GCAGGGGCCCTCTT---GGTTTGATGA-----CGTGGC-GAT 1549
consensus_10801#1      A-ACCGCTCTCCCCTAACGCAGGGCCCCTTCTTGTGGTTTGTGGATGGACCGTGGCCGAT 89
                             * *  *****  ****** ****  *   ******  **     ****** ***

consensus_10801#0      TCGCC----AGGTGGAGCTGTAGTTAGT----GTTGTGTTTACTGGAAAGTGAGAGTAGA 1601
consensus_10801#1      TTCCCCAAGGGGTGGGGACCATGTTAGTTTAAGTTTGTTTTACTGGAAAGTGAGAGTAGA 149
                       *  **     ***** *     ******    ***   **********************

consensus_10801#0      TACACCCGGTGGTGATGGGGCGACTGGATAATTTTCTTCTTGTTTAGGCACAGGTTTAGT 1661
consensus_10801#1      TACACCCGT--GTGATGGG-CGACTGGATAATTTTCTTCTTGTTTAGCCACAG-TTTAGT 205
                       ********   ******** *************************** ***** ******

consensus_10801#0      GACACATAGGCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGG 1721
consensus_10801#1      GACACATAGCCGGTGGATACCAACCATACCATACATCACAGCAGCTGCTGTTACTGATGG 265
                       ********* **************************************************

consensus_10801#0      TGTGACTTATGG-ATCAAAAAAAGAGGATATAGGCATACGGTTTTGCATGCCCC-CACAG 1779
consensus_10801#1      TGTGACTTATGGGATCAAAAAAAGAGGATATAGCCATACGGTTTTGCATGCCCCACACAG 325
                       ************ ******************** ******************** *****

consensus_10801#0      AGTGGAGTTTTGGCTGACTCGAGAGTATGATGTTTTTGTAGGCA-GATTTCTTGATCTGT 1838
consensus_10801#1      AGTGGA--TTTTGCTGACTCGAGAGTATGAT--TTTTGTAGCCAAGATTTCTTGATCT-T 380
                       ******  *** *******************  ******** ** ************* *

consensus_10801#0      TTCAGGTTTATGTTTGTTTACCCTGTTGCAGTGTATGGCATGCACAACTGTTGTTTTTTT 1898
consensus_10801#1      TTCAG-TTTAT-TTTGTTTACCCT-TTCCAGTGTATG-CATGCACAACTGTTGTTTTTT- 435
                       ***** ***** ************ ** ********* ********************* 

consensus_10801#0      GAAACATTATG-ATCGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAAGGA 1953
consensus_10801#1      GGAACATTATGGATCGATCAATCATGAATGTGAATGAGAATTTTGTTAAAAAA--- 488
                       * ********* *****************************************   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)