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Oryza sativa
cluster # 10857 cluster # 10857       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10857#0 length = 1580 sequences # 1  
consensus_10857#1 length = 1569 sequences # 1  
consensus_10857#2 length = 1498 sequences # 4  
consensus_10857#3 length = 1480 sequences # 2  

consensusID : consensus_10857#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1580
fasta sequence
                              [TTGTTTCCATTACCAAAATTCTGCGGCAACTTGTTTACAGCTGAGTATCAGATATTCAGAGTATAGGGAGTACTTCTTGTCCCGAAGGCAGCTGATGAGAAGGAAAACAGAGATGGTGCGGAGCACCTGCTGCGTGGTGCTGCTCTTGCTCCTCAGCGTTGCTGCTCGATCGGCTTCGGCCATCATGGACGGCCTGCTGCCGAATGGCAATTTCGAGGAGGCGCCGGACAAGTCGCAGCTGAACGGCACGAGGGTGATCGGGCGCTACGCGATACCGCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGATGCAGGGTGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTCACCCTGACGCGGGGAATGCACTACTCCGTCACCTTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGGTCACCCCGGAGATCGGCGAGGTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCGTTCAAGGCGAGACGCAGCGACGTGTCGCTCATCGTTCACAACCCTGGCGTCACCGATGACGCGGCCTGCGGCCCCCTCATCGACTCGTTCGCCATCAAGACTCTGCAATCTCCTCCAAGCACCAAAGATAACTTGCTGAAGAATGGGGGCTTCGAGGAAGGCCCGTACATCTTCCCCAACACGTCGTGGGGCGTGCTTGTGCCGCCGATGGACGAGGACGACTACTCGCCACTGTCGCCATGGACGATCATGGGATACACCAAGTCCGTCAAGTACGTGGACGCGGCGCACTACGCCGTTCCAGGCGGCGCACGCGCGGTGGAGCTGGTGGCCGGCATGGAGGCGGCGCTGGTGCAGGAGGTGTGCACCGTGCCCGGGCGGTCGTACCGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCGTGGGGTCCATGTCCGTGCAGGCGTACGTGTCGCACGGCAGCGTGAAGGTGCCGTACGAGTCGCAGGGCAGGGGTGGGTACAAGCGCGGGGTGCTCGAGTTCACGGCGACGGACAAGCGGACGCGGGTGGTGTTCGTCAGCATGGCCTACACCATGAAGCCCGACGGCACGCTCTGTGGGCCCGTCGTCGACGACGCGTCGGTCGTCGGCGTCCACAGCCATCGCCGGCTTCTTCTGTAACATAGGCTAACGTCAACGTGGCATTCATTTTGTACTGCGCCTCTCCGGTTCGTCGGAAATTATGTATAGTTCGATGATACACATATCATTGAATTGAGTTTCCTGCACCGGATTTTCTCAGTAGGAAGACGAACGGATTTGAGATTCAGATGTAGTCCTTCGCCTGTCGAGGGTTAACTCAGACATCTGAGCACCAGAAAATGTTTTCGCCTGTGCTAGATTTCATTACAAATTAGAAGCTGGATGAATGCATTAGTTTTAGTAGAGTGCTACTGAAAATACACTATGTTACACCAAGATGCATTGTTTTAACATTGTACTGCTATACTCCATTTCAGTAGTAGAAAAAATA]

[+] EMBL AK073892             [TTGTTTCCATTACCAAAATTCTGCGGCAACTTGTTTACAGCTGAGTATCAGATATTCAGAGTATAGGGAGTACTTCTTGTCCCGAAGGCAGCTGATGAGAAGGAAAACAGAGATGGTGCGGAGCACCTGCTGCGTGGTGCTGCTCTTGCTCCTCAGCGTTGCTGCTCGATCGGCTTCGGCCATCATGGACGGCCTGCTGCCGAATGGCAATTTCGAGGAGGCGCCGGACAAGTCGCAGCTGAACGGCACGAGGGTGATCGGGCGCTACGCGATACCGCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGATGCAGGGTGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTCACCCTGACGCGGGGAATGCACTACTCCGTCACCTTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGGTCACCCCGGAGATCGGCGAGGTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCGTTCAAGGCGAGACGCAGCGACGTGTCGCTCATCGTTCACAACCCTGGCGTCACCGATGACGCGGCCTGCGGCCCCCTCATCGACTCGTTCGCCATCAAGACTCTGCAATCTCCTCCAAGCACCAAAGATAACTTGCTGAAGAATGGGGGCTTCGAGGAAGGCCCGTACATCTTCCCCAACACGTCGTGGGGCGTGCTTGTGCCGCCGATGGACGAGGACGACTACTCGCCACTGTCGCCATGGACGATCATGGGATACACCAAGTCCGTCAAGTACGTGGACGCGGCGCACTACGCCGTTCCAGGCGGCGCACGCGCGGTGGAGCTGGTGGCCGGCATGGAGGCGGCGCTGGTGCAGGAGGTGTGCACCGTGCCCGGGCGGTCGTACCGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCGTGGGGTCCATGTCCGTGCAGGCGTACGTGTCGCACGGCAGCGTGAAGGTGCCGTACGAGTCGCAGGGCAGGGGTGGGTACAAGCGCGGGGTGCTCGAGTTCACGGCGACGGACAAGCGGACGCGGGTGGTGTTCGTCAGCATGGCCTACACCATGAAGCCCGACGGCACGCTCTGTGGGCCCGTCGTCGACGACGCGTCGGTCGTCGGCGTCCACAGCCATCGCCGGCTTCTTCTGTAACATAGGCTAACGTCAACGTGGCATTCATTTTGTACTGCGCCTCTCCGGTTCGTCGGAAATTATGTATAGTTCGATGATACACATATCATTGAATTGAGTTTCCTGCACCGGATTTTCTCAGTAGGAAGACGAACGGATTTGAGATTCAGATGTAGTCCTTCGCCTGTCGAGGGTTAACTCAGACATCTGAGCACCAGAAAATGTTTTCGCCTGTGCTAGATTTCATTACAAATTAGAAGCTGGATGAATGCATTAGTTTTAGTAGAGTGCTACTGAAAATACACTATGTTACACCAAGATGCATTGTTTTAACATTGTACTGCTATACTCCATTTCAGTAGTAGAAAAAATA]


>consensus_10857#0 TTGTTTCCATTACCAAAATTCTGCGGCAACTTGTTTACAGCTGAGTATCAGATATTCAGA GTATAGGGAGTACTTCTTGTCCCGAAGGCAGCTGATGAGAAGGAAAACAGAGATGGTGCG GAGCACCTGCTGCGTGGTGCTGCTCTTGCTCCTCAGCGTTGCTGCTCGATCGGCTTCGGC CATCATGGACGGCCTGCTGCCGAATGGCAATTTCGAGGAGGCGCCGGACAAGTCGCAGCT GAACGGCACGAGGGTGATCGGGCGCTACGCGATACCGCAGTGGGAGATCTCCGGGTTCGT GGAGTACATCGGGTCGGGCCAGATGCAGGGTGACATGCTCCTGCCGGTGCCGGAGGGCGC GTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTCACCCTGACGCGGGG AATGCACTACTCCGTCACCTTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAA CATCACGGTCACCCCGGAGATCGGCGAGGTCCCCATCCAGACCGTGTACACCAGCAGCGG CTGGGACTCCTACTCCTGGGCGTTCAAGGCGAGACGCAGCGACGTGTCGCTCATCGTTCA CAACCCTGGCGTCACCGATGACGCGGCCTGCGGCCCCCTCATCGACTCGTTCGCCATCAA GACTCTGCAATCTCCTCCAAGCACCAAAGATAACTTGCTGAAGAATGGGGGCTTCGAGGA AGGCCCGTACATCTTCCCCAACACGTCGTGGGGCGTGCTTGTGCCGCCGATGGACGAGGA CGACTACTCGCCACTGTCGCCATGGACGATCATGGGATACACCAAGTCCGTCAAGTACGT GGACGCGGCGCACTACGCCGTTCCAGGCGGCGCACGCGCGGTGGAGCTGGTGGCCGGCAT GGAGGCGGCGCTGGTGCAGGAGGTGTGCACCGTGCCCGGGCGGTCGTACCGGCTGGAGTT CTCCGTCGGGGACGCCGGCGACGGGTGCGTGGGGTCCATGTCCGTGCAGGCGTACGTGTC GCACGGCAGCGTGAAGGTGCCGTACGAGTCGCAGGGCAGGGGTGGGTACAAGCGCGGGGT GCTCGAGTTCACGGCGACGGACAAGCGGACGCGGGTGGTGTTCGTCAGCATGGCCTACAC CATGAAGCCCGACGGCACGCTCTGTGGGCCCGTCGTCGACGACGCGTCGGTCGTCGGCGT CCACAGCCATCGCCGGCTTCTTCTGTAACATAGGCTAACGTCAACGTGGCATTCATTTTG TACTGCGCCTCTCCGGTTCGTCGGAAATTATGTATAGTTCGATGATACACATATCATTGA ATTGAGTTTCCTGCACCGGATTTTCTCAGTAGGAAGACGAACGGATTTGAGATTCAGATG TAGTCCTTCGCCTGTCGAGGGTTAACTCAGACATCTGAGCACCAGAAAATGTTTTCGCCT GTGCTAGATTTCATTACAAATTAGAAGCTGGATGAATGCATTAGTTTTAGTAGAGTGCTA CTGAAAATACACTATGTTACACCAAGATGCATTGTTTTAACATTGTACTGCTATACTCCA TTTCAGTAGTAGAAAAAATA



consensusID : consensus_10857#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1569
fasta sequence
                              [AAAAGAAACAGAATGGCAAGCCAAACCACCATGTGACCCCAGGCAAACGCAGACAACGCCTTCCCCGGTCGCCGCCTCGCCAAGGGACCCCATTTCCACGGCACCTCAGAACCGAGGAGAGATGCCCTGCCAACCTCCTCGATCGTGGCGGTCCGCGGATCCGGCGCTCGTTTCGCTCGGTTTCCTGCAGAAAACACGCTGTCCATCTGGAGTTCTGGACATCTGGTCTGAACTCTGAACACCGATCCGTTCTCTATAATTAAGTGACAGCATATCACAATCTCCTGTACAGTTCTAAACCTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGCCACTAGAATTTAAAATGACTTAAAGTTGTCC]

[+] EMBL AK072539             [AAAAGAAACAGAATGGCAAGCCAAACCACCATGTGACCCCAGGCAAACGCAGACAACGCCTTCCCCGGTCGCCGCCTCGCCAAGGGACCCCATTTCCACGGCACCTCAGAACCGAGGAGAGATGCCCTGCCAACCTCCTCGATCGTGGCGGTCCGCGGATCCGGCGCTCGTTTCGCTCGGTTTCCTGCAGAAAACACGCTGTCCATCTGGAGTTCTGGACATCTGGTCTGAACTCTGAACACCGATCCGTTCTCTATAATTAAGTGACAGCATATCACAATCTCCTGTACAGTTCTAAACCTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGCCACTAGAATTTAAAATGACTTAAAGTTGTCC]


>consensus_10857#1 AAAAGAAACAGAATGGCAAGCCAAACCACCATGTGACCCCAGGCAAACGCAGACAACGCC TTCCCCGGTCGCCGCCTCGCCAAGGGACCCCATTTCCACGGCACCTCAGAACCGAGGAGA GATGCCCTGCCAACCTCCTCGATCGTGGCGGTCCGCGGATCCGGCGCTCGTTTCGCTCGG TTTCCTGCAGAAAACACGCTGTCCATCTGGAGTTCTGGACATCTGGTCTGAACTCTGAAC ACCGATCCGTTCTCTATAATTAAGTGACAGCATATCACAATCTCCTGTACAGTTCTAAAC CTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTA CTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGC GCTGCTCTTGGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATG GCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGA GGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCG GGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGC GGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACT CCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCA CCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCT ACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTG TCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACC CTCCTCAAAGAACGAAAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAGGGCCCGTACA TCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGACGACTACTCGC CGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATCGACGCGGCGC ACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATGGAGACGGCGA TGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGG ACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCG TGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCA CGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACCACGAAGTCCG ACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACC GCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGCCACTAGAATTTAAAATGACTTA AAGTTGTCC



consensusID : consensus_10857#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1498
fasta sequence
                              [AGTTCTAAACCTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAATTAATTAATTGAGCCGGGTGCTAACCTCTCCACAAAGCTGCTATCAGTGTGCATCTCTACAAAATTGAATACAAGGATGTGCTCACAGTCATGAAACAATCGAACAAAATGAACCAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGTCACTAGAATTTAAAATGACTTAAAGTTGTCCCATATGAAGGAATATCTCAATTCCTTTTATATGATTCTTATGCCAAAAGGGTGAGATGATTTTTTTTACCGAGGAAAAAAATGTGAGATATTATGGATG]

[+] EMBL AK063925             [AGTTCTAAACCTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAATTAATTAATTGAGCCGGGTGCTAACCTCTCCACAAAGCTGCTATCAGTGTGCATCTCTACAAAATTGAATACAAGGATGTGCTCACAGTCATGAAACAATCGAACAAAATGAACCAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGTCACTAGAATTTAAAATGACTTAAAGTTGTCCCATATGAAGGAATATCTCAATTCCTTTTATATGATTCTTATGCCAAAAGGGTGAGATGATTTTTTTTACCGAGGAAAAAAATGTGAGATATTATGGATG]
[+] EMBL OSR24771A            [                               TGCCACCTTGCTTACAACCAAGTAATAACAGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGG AACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTNACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA755308             [                                                                    TACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCCCCTGCGTCGCGCTGCTCTTGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCGCCCTCATCGACTCGTTCGCCATTAAGACCCTGAACCCTCCTCAn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU173379             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAGCNCCGTGCCCGGGCGGTCGTACAGGCTGGAGTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTGCTCGAGTTCACGGCCNCGGAGAAACGGACGCGGGTAGTGTTNGTCAGCATGGCCTACACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTCCACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGTCNCTAGAATTTAAAATGACTTAAAGTTGTCCCATATGAAGGAATATCTCAATTCCTTTTATATGATTCTTATGCCAAAAGGGTGAGATGATTTTTTTTACCGAGGAAAAA                    ]


>consensus_10857#2 AGTTCTAAACCTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAAC AGGAGCAGTACTTGCTCAGAGAGGTGATGAGAAGAAAAACAGAGATGATTCAGACTACCC CCTGCGTCGCGCTGCTCTTGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTA TCACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGA ACGGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGG AGTACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGT ACGCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAA TGCACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACA TCACGATCACCCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGCGGCT GGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTCCACA ACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATTAAGA CCCTGAACCCTCCTCAAAGAACGAAAGGTAATTAATTAATTGAGCCGGGTGCTAACCTCT CCACAAAGCTGCTATCAGTGTGCATCTCTACAAAATTGAATACAAGGATGTGCTCACAGT CATGAAACAATCGAACAAAATGAACCAGGTAACATGCTGAAGAATGGGGGCTTCGAGGAG GGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGAGGAC GACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTACATC GACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGGCATG GAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGAGTTC TCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGCGTCG CGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGGGCTG CTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTACACC ACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAGTGTC CACAGCCACCGCCGGTTCCTTCTGTAATATTATTACTATCGTCAAAGTCACTAGAATTTA AAATGACTTAAAGTTGTCCCATATGAAGGAATATCTCAATTCCTTTTATATGATTCTTAT GCCAAAAGGGTGAGATGATTTTTTTTACCGAGGAAAAAAATGTGAGATATTATGGATG



consensusID : consensus_10857#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1480
fasta sequence
                              [CCCAGGTAAGAGCTAGCAGCTCGAGAGAGCGCAAAAAAAGAAAAAAGAAAACCCCAAAACTCCAGAGATTAATCGGCAGAGCTAGCTGTGACCGAGGAGAAGACAGAGCAGCCGAATCGAAGATGGCGTTCTATAATGGCGCGAGTGTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTGCTCGAGCTGCCGGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAGAGGGCGCGCACGCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGACCCGGGGCATGTACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGAAGCTGAACGTGTCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGTCGCTCATCATCCACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACTCCGTCGCCATCAAGACCCTGTACCCTCCTCAGGCCACCCAGAACAACATGCTGAGAAACGGGGACTTCGAGGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGCCGATCTCAGAGGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGGCCGTCAAGTGCGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGCTGGTGTCCGGGCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGTACAGGCTGGAGTTCTCGGTCGGGGACGCCAGCGACGGTTGCGTGGGTTCCATGCAGGTGAAAGGGTACGCGGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGCACACCCGCGCGTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCAGCTCGACGTACATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCTCGCTCGTGTGCGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGAAATGTTGCGCTACACGGAGCAGTTCGCGGCCGGTCACATGTACTCGCATGGCGCGTTGGAATGTGACTGTGCTGGGAGTAGCAGTCGACCTTTCTTCGAATTTGTTTCATTTTGTTTGAGAGTGATGTTCGAAATATCTGTTGAAAATTTGGTCATAATTCGGCATATTTTAATCTAAAATAACAAGATAATAAATATGATATTTACAATCAACATGAGCATAG]

[+] EMBL AK110895             [CCCAGGTAAGAGCTAGCAGCTCGAGAGAGCGCAAAAAAAGAAAAAAGAAAACCCCAAAACTCCAGAGATTAATCGGCAGAGCTAGCTGTGACCGAGGAGAAGACAGAGCAGCCGAATCGAAGATGGCGTTCTATAATGGCGCGAGTGTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTGCTCGAGCTGCCGGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAGAGGGCGCGCACGCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGACCCGGGGCATGTACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGAAGCTGAACGTGTCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGTACACCAGCAGCGGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGTCGCTCATCATCCACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACTCCGTCGCCATCAAGACCCTGTACCCTCCTCAGGCCACCCAGAACAACATGCTGAGAAACGGGGACTTCGAGGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGCCGATCTCAGAGGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGGCCGTCAAGTGCGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGCTGGTGTCCGGGCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGTACAGGCTGGAGTTCTCGGTCGGGGACGCCAGCGACGGTTGCGTGGGTTCCATGCAGGTGAAAGGGTACGCGGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGCACACCCGCGCGTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCAGCTCGACGTACATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCTCGCTCGTGTGCGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGAAATGTTGCGCTACACGGAGCAGTTCGCGGCCGGTCACATGTACTCGCATGGCGCGTTGGAATGTGACTGTGCTGGGAGTAGCAGTCGACCTTTCTTCGAATTTGTTTCATTTTGTTTGAGAGTGATGTTCGAAATATCTGTTGAAAATTTGGTCATAATTCGGCATATTTTAATCTAAAATAACAAGATAATAAATATGATATTTACAATCAACATGAGCATAG]
[+] EMBL OSR26821A            [             TAGCAGCTCGAGAGAGCGCAAAAAAAGAAAAAAGAAAACCCCAAAACTCCAGAGATTAATCGGCAGAGCTAGCTGTGACCGAGGAGAAGACAGAGCAGCCGAATCGAAGATGGCGTTCTATAATGGCGCGAGTTTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTGCTCGAGCTGCCGGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_10857#3 CCCAGGTAAGAGCTAGCAGCTCGAGAGAGCGCAAAAAAAGAAAAAAGAAAACCCCAAAAC TCCAGAGATTAATCGGCAGAGCTAGCTGTGACCGAGGAGAAGACAGAGCAGCCGAATCGA AGATGGCGTTCTATAATGGCGCGAGTGTTGTCGCGCTGCTGTTGCTGGTCTCCACGGCTG CTCGAGCTGCCGGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGT CACAGATGAACGGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCG GGTTCGTGGAGTACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAG AGGGCGCGCACGCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGA CCCGGGGCATGTACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGA AGCTGAACGTGTCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGT ACACCAGCAGCGGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGT CGCTCATCATCCACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACT CCGTCGCCATCAAGACCCTGTACCCTCCTCAGGCCACCCAGAACAACATGCTGAGAAACG GGGACTTCGAGGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGC CGATCTCAGAGGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGG CCGTCAAGTGCGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGC TGGTGTCCGGGCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGT ACAGGCTGGAGTTCTCGGTCGGGGACGCCAGCGACGGTTGCGTGGGTTCCATGCAGGTGA AAGGGTACGCGGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGC ACACCCGCGCGTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCA GCTCGACGTACATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCT CGCTCGTGTGCGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGAAATG TTGCGCTACACGGAGCAGTTCGCGGCCGGTCACATGTACTCGCATGGCGCGTTGGAATGT GACTGTGCTGGGAGTAGCAGTCGACCTTTCTTCGAATTTGTTTCATTTTGTTTGAGAGTG ATGTTCGAAATATCTGTTGAAAATTTGGTCATAATTCGGCATATTTTAATCTAAAATAAC AAGATAATAAATATGATATTTACAATCAACATGAGCATAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10857#1      AAAAGAAACAGAATGGCAAGCCAAACCACCATGTGACCCCAGGCAAACGCAGACAACGCC 60
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      ------------------------------------------------------------
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      TTCCCCGGTCGCCGCCTCGCCAAGGGACCCCATTTCCACGGCACCTCAGAACCGAGGAGA 120
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      ------------------------------------------------------------
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      GATGCCCTGCCAACCTCCTCGATCGTGGCGGTCCGCGGATCCGGCGCTCGTTTCGCTCGG 180
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      ------------------------------------------------------------
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      TTTCCTGCAGAAAACACGCTGTCCATCTGGAGTTCTGGACATCTGGTCTGAACTCTGAAC 240
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      ------------------------------------------------------------
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      ACCGATCCGTTCTCTATAATTAAGTGACAGCATATCACAATCTCCTGTACAGTTCTAAAC 300
consensus_10857#2      --------------------------------------------------AGTTCTAAAC 10
consensus_10857#0      ------------------------------------------TTGTTTCCATTACCAAAA 18
consensus_10857#3      -----------------------------------------------CCCAGGTAAGAGC 13
                                                                         *      *  

consensus_10857#1      CTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGC--AG 358
consensus_10857#2      CTGTTTGCTGTCCAATCCCATTGCCACCTTGCTTACAACCAAGTAATAACAGGAGC--AG 68
consensus_10857#0      TTCTGCGGCAACTTGTTT-ACAGCTGAGTATCAGATATTCAGAGTATAG--GGAGT--AC 73
consensus_10857#3      TAGCAGCTCGAGAGAGCGCAAAAAAAGAAAAAAGAAAACCCCAAAACTCCAGAGATTAAT 73
                                          *              * *  *     *     *      * 

consensus_10857#1      TACTTGCTCAGAG---AGGTGATGAGAAGA-AAAACAGAGATGATTCAGACTACCCCCTG 414
consensus_10857#2      TACTTGCTCAGAG---AGGTGATGAGAAGA-AAAACAGAGATGATTCAGACTACCCCCTG 124
consensus_10857#0      TTCTTGTCCCGAAGGCAGCTGATGAGAAGG-AAAACAGAGATGGTGCGGAGCACCTGCTG 132
consensus_10857#3      CGGCAGAGCTAGCTGTGACCGAGGAGAAGACAGAGCAGCCGAATCGAAGATGGCGTTCTA 133
                            *  *           ** ******  * * ***          **   *   ** 

consensus_10857#1      CG-TCGCGCTGCTCTTGGCTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATC 473
consensus_10857#2      CG-TCGCGCTGCTCTTG-CTCGTCGGCGTTGCTTTTGCTGCTCGATCGGCGTCGGCTATC 182
consensus_10857#0      CG-TGGTGCTGCTCTTG-CTCCTCAGCG------TTGCTGCTCGATCGGCTTCGGCCATC 184
consensus_10857#3      TAATGGCGCGAGTGTTGTCGCGCTGCTGTTGC--TGGTCTCCACGGCTGCTCGAGCTGCC 191
                          * * **   * *** * *      *      * *   *     * **    **   *

consensus_10857#1      ACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAAC 533
consensus_10857#2      ACCGATGGCCTGCTGCCGAATGGCAACTTCGAGGAGGCGCCGGACAAGTCGCAGATGAAC 242
consensus_10857#0      ATGGACGGCCTGCTGCCGAATGGCAATTTCGAGGAGGCGCCGGACAAGTCGCAGCTGAAC 244
consensus_10857#3      GGCGATGGCCTGCTGCTCAACGGCAACTTCGAGTACCAGCCGAGCAAGTCACAGATGAAC 251
                          ** **********  ** ***** ****** *   ****  ****** *** *****

consensus_10857#1      GGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAG 593
consensus_10857#2      GGCACGAGGGTGACGGGTCGCTACGCGATACCTCAGTGGGAGATCTCCGGGTTCGTGGAG 302
consensus_10857#0      GGCACGAGGGTGATCGGGCGCTACGCGATACCGCAGTGGGAGATCTCCGGGTTCGTGGAG 304
consensus_10857#3      GGCACAAGGGTGATGGCGGAGTACGCGATCCCGTACTGGAAGATCACCGGGTTCGTGGAG 311
                       ***** *******  *     ******** **  * *** ***** **************

consensus_10857#1      TACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTAC 653
consensus_10857#2      TACATCGGGTCGGGCCAGAAGCAGGGAGACATGCTCCTGCCGGTGCCGGAGGGCGCGTAC 362
consensus_10857#0      TACATCGGGTCGGGCCAGATGCAGGGTGACATGCTCCTGCCGGTGCCGGAGGGCGCGTAC 364
consensus_10857#3      TACATCTCGTCCGGGCAGAAGCAGGGCGACATGCTGCTGACGGTGCCAGAGGGCGCGCAC 371
                       ******  *** ** **** ****** ******** *** ******* ********* **

consensus_10857#1      GCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATG 713
consensus_10857#2      GCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTTACCCTGACGCGGGGAATG 422
consensus_10857#0      GCCGTGCGGCTGGGCAACGAGGCCTCCATCCAGCAGCGGCTCACCCTGACGCGGGGAATG 424
consensus_10857#3      GCCGTGCGGCTGGGCAACGAGGCCTCCATCGAGCAGCAGATCAGCGTGACCCGGGGCATG 431
                       ****************************** ****** * * * * **** ***** ***

consensus_10857#1      CACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATC 773
consensus_10857#2      CACTACTCCATCACATTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATC 482
consensus_10857#0      CACTACTCCGTCACCTTCAGCGCGGCGCGCACCTGCGCCCAGTCCGAGCTCCTCAACATC 484
consensus_10857#3      TACTACTCCATCACATTCAGCGCCGCGCGCACCTGCGCCCAGTCCGAGAAGCTGAACGTG 491
                        ******** **** ******** ************************   ** *** * 

consensus_10857#1      ACGATCAC------CCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGC 827
consensus_10857#2      ACGATCAC------CCCCGAGTCCGGCGAGATCCCCATCCAGACGGTGTACACCAGCAGC 536
consensus_10857#0      ACGGTCAC------CCCGGAGATCGGCGAGGTCCCCATCCAGACCGTGTACACCAGCAGC 538
consensus_10857#3      TCAGTGGCTCCCGGCCCGGAGTCCGGCGAGCTCCCCATCCAGACCGTGTACACCAGCAGC 551
                        *  *  *      *** ***  ******* ************* ***************

consensus_10857#1      GGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTC 887
consensus_10857#2      GGCTGGGACTCCTACTCCTGGGCCTTCAAGGCCAAGCACAGCGTCGTGTTGTTCATCGTC 596
consensus_10857#0      GGCTGGGACTCCTACTCCTGGGCGTTCAAGGCGAGACGCAGCGACGTGTCGCTCATCGTT 598
consensus_10857#3      GGCTGGGACTCGTACGCCTGGGCGTTCAAGGCCAAGCGCGGCCTCGTGTCGCTCATCATC 611
                       *********** *** ******* ******** *  * * **  ***** * ***** * 

consensus_10857#1      CACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATT 947
consensus_10857#2      CACAACCCCGGTGTCTCTGATGACGAAGCTTGCGGCCCCCTCATCGACTCGTTCGCCATT 656
consensus_10857#0      CACAACCCTGGCGTCACCGATGACGCGGCCTGCGGCCCCCTCATCGACTCGTTCGCCATC 658
consensus_10857#3      CACAACCACGGCGAGGACGACGACCCCGCGTGCGGCCCGCTCATCGACTCCGTCGCCATC 671
                       *******  ** *     ** ***   ** ******** ***********  ******* 

consensus_10857#1      AAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAA------------------------- 982
consensus_10857#2      AAGACCCTGAACCCTCCTCAAAGAACGAAAGGTAATTAATTAATTGAGCCGGGTGCTAAC 716
consensus_10857#0      AAGACTCTGCAATCTCCTCCAAGCACCAAAGATAA------------------------- 693
consensus_10857#3      AAGACCCTGTACCCTCCTCAGGCCACCCAGAACAA------------------------- 706
                       ***** *** *  ******     **  *    **                         

consensus_10857#1      ------------------------------------------------------------
consensus_10857#2      CTCTCCACAAAGCTGCTATCAGTGTGCATCTCTACAAAATTGAATACAAGGATGTGCTCA 776
consensus_10857#0      ------------------------------------------------------------
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      ------------------------------------CATGCTGAAGAATGGGGGCTTCGA 1006
consensus_10857#2      CAGTCATGAAACAATCGAACAAAATGAACCAGGTAACATGCTGAAGAATGGGGGCTTCGA 836
consensus_10857#0      ------------------------------------CTTGCTGAAGAATGGGGGCTTCGA 717
consensus_10857#3      ------------------------------------CATGCTGAGAAACGGGGACTTCGA 730
                                                           * ******  ** **** ******

consensus_10857#1      GGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGA 1066
consensus_10857#2      GGAGGGCCCGTACATCTTCCCCAACACGTCCTGGGGCGTGCTTGTGCCGCCCATGGACGA 896
consensus_10857#0      GGAAGGCCCGTACATCTTCCCCAACACGTCGTGGGGCGTGCTTGTGCCGCCGATGGACGA 777
consensus_10857#3      GGAGGGGCCGTACATGTTCCCGAACGCGGCGTGGGGAGTGATGGTGCCGCCGATCTCAGA 790
                       *** ** ******** ***** *** ** * ***** *** * ******** **    **

consensus_10857#1      GGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTA 1126
consensus_10857#2      GGACGACTACTCGCCGCTGTCCCCGTGGACGATCCTGTCGACCACCAAGTCCGTCAAGTA 956
consensus_10857#0      GGACGACTACTCGCCACTGTCGCCATGGACGATCATGGGATACACCAAGTCCGTCAAGTA 837
consensus_10857#3      GGACGACCACTCGCCGCTGCCGGGGTGGATGGTGATGTCGGACACGAAGGCCGTCAAGTG 850
                       ******* ******* *** *    **** * *  **     *** *** ********* 

consensus_10857#1      CATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGG 1186
consensus_10857#2      CATCGACGCGGCGCACTACGCTGTGCCGGGCGGCGCCCGCGCGGTTGAGCTGGTGTCCGG 1016
consensus_10857#0      CGTGGACGCGGCGCACTACGCCGTTCCAGGCGGCGCACGCGCGGTGGAGCTGGTGGCCGG 897
consensus_10857#3      CGTCGACTCCGCGCACTTCACCGTGCCGCACGGCGCGCGCGCCGTGGAGCTGGTGTCCGG 910
                       * * *** * ******* * * ** **   ****** ***** ** ********* ****

consensus_10857#1      CATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGA 1246
consensus_10857#2      CATGGAGACGGCGATGCTGCAGGAGGTGAGCACCGTGCCCGGGCGGTCGTACAGGCTGGA 1076
consensus_10857#0      CATGGAGGCGGCGCTGGTGCAGGAGGTGTGCACCGTGCCCGGGCGGTCGTACCGGCTGGA 957
consensus_10857#3      GCTCGAGACGGCGCTGATGCAGGAGGTGCGCACCGTGCCGGGGAGGTCGTACAGGCTGGA 970
                         * *** ***** ** *********** ********** *** ******** *******

consensus_10857#1      GTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGC 1306
consensus_10857#2      GTTCTCCGTCGGGGACGCCGGCGACGGGTGCTCCGGGTCCCTGACCGTGCAGGCGTACGC 1136
consensus_10857#0      GTTCTCCGTCGGGGACGCCGGCGACGGGTGCGTGGGGTCCATGTCCGTGCAGGCGTACGT 1017
consensus_10857#3      GTTCTCGGTCGGGGACGCCAGCGACGGTTGCGTGGGTTCCATGCAGGTGAAAGGGTACGC 1030
                       ****** ************ ******* ***   ** *** **   *** * * ***** 

consensus_10857#1      GTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGG 1366
consensus_10857#2      GTCGCGCGGGAGCGTGAAGGTGACGTACCAGTCGCAGGGCACGGGCGGCTACAAGCGCGG 1196
consensus_10857#0      GTCGCACGGCAGCGTGAAGGTGCCGTACGAGTCGCAGGGCAGGGGTGGGTACAAGCGCGG 1077
consensus_10857#3      GGGTCAGGGGTGCACGACCGTGACGTACAGCTCCCAGGGCACGGGCGGGCACACCCGCGC 1090
                       *   *  **  **  **  *** *****   ** ******* *** **  ***  **** 

consensus_10857#1      GCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTA 1426
consensus_10857#2      GCTGCTCGAGTTCACGGCCACGGAGAAACGGACGCGGGTAGTGTTCGTCAGCATGGCCTA 1256
consensus_10857#0      GGTGCTCGAGTTCACGGCGACGGACAAGCGGACGCGGGTGGTGTTCGTCAGCATGGCCTA 1137
consensus_10857#3      GTCGCTGGAGTTCGCCGCCGTCGCGAACACCACGCGGGTGGTGTTCGTCAGCTCGACGTA 1150
                       *  *** ****** * **    *  **    ******** ************  * * **

consensus_10857#1      CACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAG 1486
consensus_10857#2      CACCACGAAGTCCGACGGCACGCTGTGTGGTCCCGTCATCGACGACGCGTCGCTCGTCAG 1316
consensus_10857#0      CACCATGAAGCCCGACGGCACGCTCTGTGGGCCCGTCGTCGACGACGCGTCGGTCGTCGG 1197
consensus_10857#3      CATCACCAAGTGGGACGGGACGCTGTGCGGGCCCGTCGTCGACGACGCCTCGCTCGTGTG 1210
                       ** **  ***   ***** ***** ** ** ****** ********** *** ****  *

consensus_10857#1      TGT----CCACAGCCACCGCCGGTTC--CTTCTGTAATATTATT--ACTATCGTCAAAGC 1538
consensus_10857#2      TGT----CCACAGCCACCGCCGGTTC--CTTCTGTAATATTATT--ACTATCGTCAAAGT 1368
consensus_10857#0      CGT----CCACAGCCATCGCCGGCTT--CTTCTGTAACATAG----GCTAACGTCAACGT 1247
consensus_10857#3      CGTGTCCCAGCAGCAGCCGCCCGCTCGCCGCCTGCTTCGTCTCTGAAATGTTGCGCTACA 1270
                        **    *  ****   **** * *   *  ***     *        *   *       

consensus_10857#1      CACTAGAATTTAAAATGACTTAAAGTTGTCC----------------------------- 1569
consensus_10857#2      CACTAGAATTTAAAATGACTTAAAGTTGTCCCATATGAAGGAATATCTCAATTCCTTTTA 1428
consensus_10857#0      GGCATTCATTTTGTACTGCGCCTCTCCGGTTCGTCGGAAATTATGTATAGTTCGATGATA 1307
consensus_10857#3      CGGAGCAGTTCGCGGCCGGTCACATGTACTCGCATGGCGCGTTGGAATGTGACTGTGCTG 1330
                               **                                                  

consensus_10857#1      ------------------------------------------------------------
consensus_10857#2      TATG-ATTCTTATGCCAAAAGGGTGAGATGATTTTTTTTACCGAGGAAAAAAATGTGAGA 1487
consensus_10857#0      CACATATCATTGAATTGAGTTTCCTGCACCGGATTTTCTCAGTAGGAAGACGAACGGATT 1367
consensus_10857#3      GGAGTAGCAGTCGACCTTTCTTCGAATTTGTTTCATTTTGTTTGAGAGTGATGTTCGAAA 1390
                                                                                   

consensus_10857#1      ------------------------------------------------------------
consensus_10857#2      TAT-TATGGATG------------------------------------------------ 1498
consensus_10857#0      TGA-GATTCAGATGTAGTCCTTCGCCTGTCGAGGGTTAACTCAGACATCTGAGCACCAGA 1426
consensus_10857#3      TATCTGTTGAAAATTTGGTCATAATTCGGCATATTTTAATCTAAAATAACAAGATAATAA 1450
                                                                                   

consensus_10857#1      ------------------------------------------------------------
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      AAATGTTTTCGCCTGTGCTAGATTTCATTACAAATTAGAAGCTGGATGAATGCATTAGTT 1486
consensus_10857#3      ATATGATATTTACAATCAACATGAGCATAG------------------------------ 1480
                                                                                   

consensus_10857#1      ------------------------------------------------------------
consensus_10857#2      ------------------------------------------------------------
consensus_10857#0      TTAGTAGAGTGCTACTGAAAATACACTATGTTACACCAAGATGCATTGTTTTAACATTGT 1546
consensus_10857#3      ------------------------------------------------------------
                                                                                   

consensus_10857#1      ----------------------------------
consensus_10857#2      ----------------------------------
consensus_10857#0      ACTGCTATACTCCATTTCAGTAGTAGAAAAAATA 1580
consensus_10857#3      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)