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Oryza sativa
cluster # 10890 cluster # 10890       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10890#0 length = 1629 sequences # 6  
consensus_10890#1 length = 781 sequences # 2  

consensusID : consensus_10890#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1629
fasta sequence
                              [ACCTCCACCACTAACCTAACCCCCTTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGCCGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAGTGATGATGATTTCGATCTAGATGCCTTAGCCAATGCACTTGAGGAAGCAGCGACTTTAGCATCTAACTCAAAGAAGCAAAACAAACCAAAGCGTAGTAATGCCCCTATAAAATGCCCTGTAGGAAAGCAGAAAGTGGATGATCCAAGCTTACCAGTTCTTCCTTGCTTCTACATCTATTATGGTAAGGAGCAATTTAGAGACAAAGGCAGTGTAGGTTCAAATAGCAGCAAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGC-CAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGCCAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTCCTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGTTTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACTATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGTTTGTCTGGGTTGTCAACT-C-AATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAGTGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATATTTCCTGTCTTGGTCTGGAACCTTCTCAGATTTGTTTGGTAGAGCTTAATATATAATCATAGTACTAAAAAAAGGA]

[+] EMBL AK065522             [ACCTCCACCACTAACCTAACCCCCTTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGCCGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAGTGATGATGATTTCGATCTAGATGCCTTAGCCAATGCACTTGAGGAAGCAGCGACTTTAGCATCTAACTCAAAGAAGCAAAACAAACCAAAGCGTAGTAATGCCCCTATAAAATGCCCTGTAGGAAAGCAGAAAGTGGATGATCCAAGCTTACCAGTTCTTCCTTGCTTCTACATCTATTATGGTAAGGAGCAATTTAGAGACAAAGGCAGTGTAGGTTCAAATAGCAGCAAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGC CAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGCCAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTCCTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGTTTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACTATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGTTTGTCTGGGTTGTCAACT C AATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAGTGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATATTTCCTGTCTTGGTCTGGAACCTTCTCAGATTTGTTTGGTAGAGCTTAATATATAATCATAG              ]
[+] EMBL CB664132             [                                                                            CCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTCAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAAAGTCCAAAAGTGCCACACCCCTGCACAAACAGATGGCATGGTTGACGAAACATATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCCGTGATGATGATTTCCATCTAGATGCCTTATCCAATGCACTTGAGGAAGCAGCGACTTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB626827             [                                                                                                                                                                                                                                           ACCAAGATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAGTGATGATGATTTCGATCTAGATGCCTTAGCCAATGCACTTGAGGAAGCAGCGACGTTAGCATCTAACTCAAAGAAGCAAAACAAACCAAAGCGTAGTAATGCCCCTATAAAATGCCCTGTAGGAAAGCAGAAAGTGGATGATCCAAGCTTACCAGTTCTTCCTTGCTTCTACATCTATTATGGTAAGGAGCAATTTAGAGAC AAGGCAGTGTAGGTTCAAATAGCAGCGAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGCNCAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CB664133             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGTAAGGAGCAATTTAGAGACAAAGGCAGTGTAGGTTCAAATAGCAGCAAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGC CAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGCCAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTCCTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGTTTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACTATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGTTTGTCTGGGTTGTCAACTCC AATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAGTGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATAT                                                                           ]
[-] EMBL CB626828             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAC AAGGCAGTGTAGGTTCAAATAGCAGCGAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGC CAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGCTGGAAAGCCAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGATGATTAAAGTCCTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTACGTTTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACTATACGTTTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGTTTGTCTGGGTTGTCAACT CAAATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAATGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATATTTCCT                                                                      ]
[-] EMBL CB657283             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AGTTTTAGCGAAAGAAATTGCAGATGTAGCAAATGACGAAGAAGAGAAATGGGACGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGC CAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGCCAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTCCTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGTTTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACTATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGTTTGTCTGGGTTGTCAACTCC AATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAGTGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATATTTCCTGTCTTGGTCTGGAACCTTCTCAGATTTGTTTGGTAGAGCTTAATATATAATCATAGTACTAAAAAAAGGA]


>consensus_10890#0 ACCTCCACCACTAACCTAACCCCCTTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGC CGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAA CCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCT GGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAA GATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCA ATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAA GTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGAC GAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGA TGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTC TTCAAGTTTACTGAACAAGAGCCATGAGGTCAGTGATGATGATTTCGATCTAGATGCCTT AGCCAATGCACTTGAGGAAGCAGCGACTTTAGCATCTAACTCAAAGAAGCAAAACAAACC AAAGCGTAGTAATGCCCCTATAAAATGCCCTGTAGGAAAGCAGAAAGTGGATGATCCAAG CTTACCAGTTCTTCCTTGCTTCTACATCTATTATGGTAAGGAGCAATTTAGAGACAAAGG CAGTGTAGGTTCAAATAGCAGCAAGTCAGTTTTAGCGAAAGAAATTGCAGATGTAGCAAA TGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTGGTGCTGA CAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCTTTAGGTA TTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCACATGCCA GCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCATATTTCCT CCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGCTGACTCT TATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGCCAGGCAG CTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTCCTCCAGT GCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGTTTTCGAA TGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCGATCTACT ATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTCCTGTTGT TTGTCTGGGTTGTCAACTCAATGAGGGAGAACATGTCAAGCACTTGGTCGTTTCTGTAGT GTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATATTTCCTG TCTTGGTCTGGAACCTTCTCAGATTTGTTTGGTAGAGCTTAATATATAATCATAGTACTA AAAAAAGGA



consensusID : consensus_10890#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 781
fasta sequence
                              [TTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGCCGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGTATGCCTTTGGTTTTGCCCTCTCTGTGTATTCTTGATTTCG-TTTTTTTTTTTTTTTTGGCTCGCTCTTCTTCTGTCTGAGTCTGCCCCAGGAAGTTGCAATTTAAGCTATTAGCCTGTTACTGAAACTGTGTTTTGTATTTCTTCATGTTATTAGCGATTTTAGTTTTCTATCCTTCCCAAAGGTGTTTTTGAAGCTCAGTGATTTGTTCAATTGAATCAATTGTATGCAGGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAG]

[+] EMBL CB657282             [TTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGCCGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGTATGCCTTTGGTTTTGCCCTCTCTGTGTATTCTTGATTTCG TTTTTTTTTTTTTTTTGGCTCGCTCTTCTTCTGTCTGAGTCTGCCCCAGGAAGTTGCAATTTAAGCTATTAGCCTGTTACTGAAACTGTGTTTTGTATTTCTTCATGTTATTAGCGATTTTAGTTTTCTATCCTTCCCAAAGGTGTTTTTGAAGCTCAGTGATTTGTTCAATTGAATCAATTGTATGCAGGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGCTTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAG]
[+] EMBL CB640392             [                                                                                                                                                                                                             TACACCACCAAGATCGGTGGAGTCCCCGTATGCCTTTGGTTTTGCCCTCTCTGTGTATTCTTGATTTCGTTTTTTTTTTTTTTTTTGGCTCGCTCTTCTTCTGTCTGAGTCTGCCCCAGGAAGTTGCAATTTAAGCTATTAGCCTGTTACTGAAACTGTGTTTTGTATTTCTTCATGTTATTAACGATTTTAGTTTTCTATCCTTCCCAAAGGTGTTTTTGAAGCTCAATGATTTGTTCAATTGAATCAATTGTATGCACGACTGGCCCACC                                                                                                                                                                                                                                                                                                                 ]


>consensus_10890#1 TTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGCCGGATTCTTGGCTCGGCCATCTTG CCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAACCTCTCTTCCAAGGGAAGAGTAGA GGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCTGGGCTTGCCGGGGCCCTGGGCGGA GGACTACCGGGAGAAGGCCGATCACTACACCACCAAGATCGGTGGAGTCCCCGTATGCCT TTGGTTTTGCCCTCTCTGTGTATTCTTGATTTCGTTTTTTTTTTTTTTTTGGCTCGCTCT TCTTCTGTCTGAGTCTGCCCCAGGAAGTTGCAATTTAAGCTATTAGCCTGTTACTGAAAC TGTGTTTTGTATTTCTTCATGTTATTAGCGATTTTAGTTTTCTATCCTTCCCAAAGGTGT TTTTGAAGCTCAGTGATTTGTTCAATTGAATCAATTGTATGCAGGACTGGCCAACCGAGG ATATGGGCATTAAACCTCACTTGCTCCAATGCGGTTTATGTGGAACCAAGTTGTGCCTTG TTGCTCAGGTTCATGCTCCTGTGGCAAAGTTCAACATTGAGAACAGGACTATCTATGTGC TTGTTTGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCC AAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAGATCAAATAAACG GAAATGTTTGCTCAAGTGAGCCTTCTTCTTCAAGTTTACTGAACAAGAGCCATGAGGTCA G



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10890#0      ACCTCCACCACTAACCTAACCCCCTTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGC 60
consensus_10890#1      ------------------------TTCTCTTTCCGCCGCCGGACGCCGGCGAGTACCGGC 36
                                               ************************************

consensus_10890#0      CGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAA 120
consensus_10890#1      CGGATTCTTGGCTCGGCCATCTTGCCTGCCTCGCTGCTACCTGCTCGTTGTGTGGAAGAA 96
                       ************************************************************

consensus_10890#0      CCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCT 180
consensus_10890#1      CCTCTCTTCCAAGGGAAGAGTAGAGGGAGGCAGGGAGGGGATGGGGGAGGAGGTGCATCT 156
                       ************************************************************

consensus_10890#0      GGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAA 240
consensus_10890#1      GGGCTTGCCGGGGCCCTGGGCGGAGGACTACCGGGAGAAGGCCGATCACTACACCACCAA 216
                       ************************************************************

consensus_10890#0      GATCGGTGGAGTCCCCGACTGGCCAACCGAGGATATGGGCATTAAACCTCACTTGCTCCA 300
consensus_10890#1      GATCGGTGGAGTCCCCG------------------TATGCCTTTGGTTTTGCCCTCTCT- 257
                       *****************                  *  ** **     *  *   ***  

consensus_10890#0      ATGCGGTTTATGTGGAACCAAGTTGTGCCTTGTTGCTCAGGTTCATGCTCCTGTGGCAAA 360
consensus_10890#1      -----GTGTATTCTTGATTTCGTTTTTTTTTTTTTTTTGGCTCGCTCTTCTTCTGTCTGA 312
                            ** ***     *    *** *   ** **  *  * *   *  ** * ** *  *

consensus_10890#0      GTTCAACATTGAGAACAGGACTAT---CTATGTGCTTGTTTGTCCGAAGCCAAAATGTGG 417
consensus_10890#1      GTCTGCCCCAGGAAGTTGCAATTTAAGCTATTAGCCTGTTA--CTGAAACTGTGTTTTGT 370
                       **    *   *  *   * * * *   ****  ** ****   * *** *     * ** 

consensus_10890#0      GACGAACCCGCAAAGTTGGAAGGTCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAAC 477
consensus_10890#1      -ATTTCTTCATGTTATTAGC-GATTTTAGTTTTCTATCCTTCCCAAA--GGTGTTTTTGA 426
                        *      *      ** *  * *  **    ** *    * *** *   ***       

consensus_10890#0      AGATGGCAAGGTTGACGAAACAGATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCTTC 537
consensus_10890#1      AGCTCAGTGATTTGTTCAATTGAATCAATTGTATGCAG--GACTGGCCAACCGAGGATAT 484
                       ** *       ***   **    ***** *  * * *   *  **  ***  ***  *  

consensus_10890#0      T--TCTTCAAGTTTACTGAACAAGAGCCATGAGGTCAGTGATGATGATTTCGATCTAGAT 595
consensus_10890#1      GGGCATTAAACCTCACTTGCTCCAA--TGCGGTTTATGTGGAACCAAGTTGTGCCTTGTT 542
                            ** **  * ***       *     *   *  ***      * **    ** * *

consensus_10890#0      GCCTTAGCCAATGCACTTGAGGAAGCAGCGACTTTAGCATCTAACTCAAAGAAGCAAAAC 655
consensus_10890#1      GCTCAGGTTCATGCTCCTGTGGCAA-----AGTTCAACATTGAG--------AACAGGAC 589
                       **    *   **** * ** ** *      * ** * ***  *         * **  **

consensus_10890#0      AAACCAAAGCGTAGTAATGCCCCTATAAAATGCCCTGTAGGAAAGCAGAAAGT-GGATGA 714
consensus_10890#1      TATCTATGTGCTTGTT-TGTCCGAAGCCAAAATGTGGGACGAACCCGCAAAGTTGGAAGG 648
                        * * *     * **  ** **  *   **      * * ***  *  ***** *** * 

consensus_10890#0      TCCAAGCTTACCAGTTCTTCCTTGCTTCTACATCTATT-ATGGTAAGGAGCAATTTAGAG 773
consensus_10890#1      TCCTAAGAGTCCAAAAGTGCCACACCAGTGCACAAACAGATGGCAAGGTTGACGAAACAG 708
                       *** *     ***    * **   *   * **   *   **** ****   *    * **

consensus_10890#0      ACAAAGGCAGTGTAGGTTCAAATAGCAGCAAGTCAGTTTTAGCGAAAGAAATTGCAGATG 833
consensus_10890#1      ATCAAATAAACGGAAATGTTTGCTCAAGTGAGCCT-TCTTCTTCAAGTTTACTGAACAAG 767
                       *  **   *  * *  *         **  ** *  * **    **    * ** * * *

consensus_10890#0      TAGCAAATGACGAAGAAGAGAAATGGGAAGGAGAAAACTATGAATATGACAGAGCTATTG 893
consensus_10890#1      AGCCATGAGGTCAG---------------------------------------------- 781
                          **   *   *                                               

consensus_10890#0      GTGCTGACAGAACGTTCTTAAAATTCAAGAAACGGTTGGATGCATATCCGCAGCAATGCT 953
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      TTAGGTATTCTTATGGTGGTAAGCCACTGTTGGCTGCAACAAACCTTCAAGATTCTGGCA 1013
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      CATGCCAGCTTTGTGGTTCACCACGCCAATATGAGCTACAATTGATGTCTCCATTGTCAT 1073
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      ATTTCCTCCATGAAGCTGGTGATGGTTCCTCAGATTATGCACCTGATGGCTGGACCTGGC 1133
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      TGACTCTTATCATATACACCTGCTCAAAGAGCTGCTGCCCATCCTCCTGTGTTGGAAAGC 1193
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      CAGGCAGCTGCTGCTGGGGAGTAGCAGAGGAGGAGATAATGATTCAGGAGGATTAAAGTC 1253
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      CTCCAGTGCCTACAATGTTGAGAAACCAAACCATTCCTGGTTTGAGTGCGTGATGTGCGT 1313
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      TTTCGAATGCTCTTTTCCAGTCGTTGAGGTCGTAAAGCTATCTGTAGTTCATAGGAGGCG 1373
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      ATCTACTATACGTGTTCTTGTTGACATTCCCTGTTTCAGATTCTTTTAAATCATGTATTC 1433
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      CTGTTGTTTGTCTGGGTTGTCAACTCAATGAGGGAGAACATGTCAAGCACTTGGTCGTTT 1493
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      CTGTAGTGTGATCCTTTGTACTTTGTAGCATAGTGTTGCCTTGTCAATCCCAGCCATATA 1553
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      TTTCCTGTCTTGGTCTGGAACCTTCTCAGATTTGTTTGGTAGAGCTTAATATATAATCAT 1613
consensus_10890#1      ------------------------------------------------------------
                                                                                   

consensus_10890#0      AGTACTAAAAAAAGGA 1629
consensus_10890#1      ----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)