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Oryza sativa
cluster # 10978 cluster # 10978       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10978#0 length = 1979 sequences # 7  
consensus_10978#1 length = 374 sequences # 1  

consensusID : consensus_10978#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1979
fasta sequence
                              [GAAGGATCGATCACCAACTCCAACTCCAACTCCAACTCCTCCTCCTCCTCCTCCTTCCGCCGCCGCCGCCGCCAGAGCATGGAACCCTCCGCCTCCGCGTCGGCTGATCCGCCCAGGAGGTCTCCATGGAGGCACCCCTCCAACGGGGGCAACCCCAACCCCAACGGAGACGCCGTCATCGACACAACTAGCTGGCCCGCGCTCTCCGAGGCCGCCAGGAACCCCCCCAAGCCTCCTCCTTGCATCGACTCTCCATACG------AGGGCAAGCAGTCGTCTCGCCACAAGCCGGCCAGGCGCGGGGGTGCCGGTGCCGACCACTCCCCCTCCCCACGGGATGACCGCGCCACCAGCTGGGACCATGGCCGCCACCACCACCACCACAACAGTGGTGGTAGGAGGGGCTCTTTTGGCGGCCGCAGGAGAGGAGGAGGAGGCGGGGGTTTCGACGCCTTGTACCGTGCCCCTATTGGCCCCTATGTGCGTGGTGCCACTGCGCCCCCGCCCCCGCCCCCGCCTCCCATGGCCGTTGCTCCTCCCCCCTTCCTTCCTCCGCCCTTACGACCTTTCGCGGCACCTCTCCTCTTTCATCACGATATGGCATCGCCCGTCTCTCCTGTTTCCCCAATCTACTATGTTGGCCCTCCCCCTCCTCCAGAAGCTCTTAGGCCTTTGCCTCCTTTCCCCCCTACCATGCTTGCTCCACCTGCTTACCCTTACTACCACCCTCAACCTCAACCCGACCCCGAGCCCGAGCCTGATGCTGATCCTCAACAACATCGTGCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTTTTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTCAACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCATCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTGATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCACATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAAAACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCA-CCAGTAGTTGAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGGTTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAA-GGCATATGTAGAGGCAT-CAAAGAAGATG-AGGGGGGTGGGGGGAGCCA-TTGGACATAATG-AATGAAAGA-CGATGGTGCGC-TAAGTTAAAAGGCACTCGA-GTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCT-TGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAGAACAAAAAAAAATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTATTGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATAATTTATTGCCTTTTGATGAGCTCTCTGCTTTGTACCGTCTGAAAAAAAAAAAAAAAAAA]

[+] EMBL AK073135             [GAAGGATCGATCACCAACTCCAACTCCAACTCCAACTCCTCCTCCTCCTCCTCCTTCCGCCGCCGCCGCCGCCAGAGCATGGAACCCTCCGCCTCCGCGTCGGCTGATCCGCCCAGGAGGTCTCCATGGAGGCACCCCTCCAACGGGGGCAACCCCAACCCCAACGGAGACGCCGTCATCGACACAACTAGCTGGCCCGCGCTCTCCGAGGCCGCCAGGAACCCCCCCAAGCCTCCTCCTTGCATCGACTCTCCATACG      AGGGCAAGCAGTCGTCTCGCCACAAGCCGGCCAGGCGCGGGGGTGCCGGTGCCGACCACTCCCCCTCCCCACGGGATGACCGCGCCACCAGCTGGGACCATGGCCGCCACCACCACCACCACAACAGTGGTGGTAGGAGGGGCTCTTTTGGCGGCCGCAGGAGAGGAGGAGGAGGCGGGGGTTTCGACGCCTTGTACCGTGCCCCTATTGGCCCCTATGTGCGTGGTGCCACTGCGCCCCCGCCCCCGCCCCCGCCTCCCATGGCCGTTGCTCCTCCCCCCTTCCTTCCTCCGCCCTTACGACCTTTCGCGGCACCTCTCCTCTTTCATCACGATATGGCATCGCCCGTCTCTCCTGTTTCCCCAATCTACTATGTTGGCCCTCCCCCTCCTCCAGAAGCTCTTAGGCCTTTGCCTCCTTTCCCCCCTACCATGCTTGCTCCACCTGCTTACCCTTACTACCACCCTCAACCTCAACCCGACCCCGAGCCCGAGCCTGATGCTGATCCTCAACAACATCGTGCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTTTTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTCAACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCATCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTGATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCACATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAAAACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCA CCAGTAGTTGAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGGTTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAA GGCATATGTAGAGGCAT CAAAGAAGATG AGGGGGGTGGGGGGAGCCA TTGGACATAATG AATGAAAGA CGATGGTGCGC TAAGTTAAAAGGCACTCGA GTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCT TGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCG                                                                                                                                                                                             ]
[+] EMBL AK105297             [                 CTCCAACTCCAACTCCAACTCCTCCTCCTCCTCCTCCTTCCGCCGCCGCCGCCGCCAGAGCATGGAACCCTCCGCCTCCGCGTCGGCTGATCCGCCCAGGAGGTCTCCATGGAGGCACCCCTCCAACGGGGGCAACCCCAACCCCAACGGAGACGCCGTCATCGACACAACTAGCTGGCCCGCGCTCTCCGAGGCCGCCAGGAACCCCCCCAAGCCTCCTCCTTGCATCGACTCTCCATCCGAGGGGCAGGGCAAGCAGTCGTCTCGCCACAAGCCGGCCAGGCGCGGGGGTGCCGGTGCCGACCACTCCCCCTCCCCACGGGATGACCGCGCCACCAGCTGGGACCATGGCCGCCACCACCACCACCACAACAGTGGTGGTAGGAGGGGCTCTTTTGGCGGCCGCAGGAGAGGAGGAGGAGGCGGGGGTTTCGACGCCTTGTACCGTGCCCCTATTGGCCCCTATGTGCGTGGTGCCACTGCGCCCCCGCCCCCGCCCCCGCCTCCCATGGCCGTTGCTCCTCCCCCCTTCCTTCCTCCGCCCTTACGACCTTTCGCGGCACCTCTCCTCTTTCATCACGATATGGCATCGCCCGTCTCTCCTGTTTCCCCAATCTACTATGTTGGCCCTCCCCCTCCTCCAGAAGCTCTTAGGCCTTTGCCTCCTTTCCCCCCTACCATGCTTGCTCCACCTGCTTACCCTTACTACCACCCTCAACCTCAACCCGACCCCGAGCCCGAGCCTGATGCTGATCCTCAACAACATCGTGCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTTTTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTCAACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCATCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTGATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCACATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAAAACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCA CCAGTAGTTGAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGGTTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAA GGCATATGTAGAGGCAT CAAAGAAGATG AGGGGGGTGGGGGGAGCCA TTGGACATAATG AATGAAAGA CGATGGTGCGC TAAGTTAAAAGGCACTCGA GTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCT TGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTT                                                                                                                                                                           ]
[+] EMBL AU108121             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TGATGCTGATCCTCAACAACATCGTGCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTTTTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTCAACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCATCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTGATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCACATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAAAACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCA CCAGTAGTTGAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGG TTCA GTAAAGGTCTTTTTGTCTANCCTGTTATTGANGTACCGTGAAAGGTTCAGCCTTTCAAGTGGTTNGTAAAAAAAAAAAGAAGTGCTGTANCTGAAACNAAAGNCAGCAAACAGAANGCCTTTTNTAGAGGCCTCCAAAGAAG TGAANANAAANNNGGGNACCCATTTGGACATAATGNAATNAAAAACCGATGGGNCCCNAAANTTNAAAGGCcc                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL CA759270             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ATCGTGCCAACCTGCTCAAACAGATTGAGTTTTACTTCAGCAAGGATAACTTATGCACAGATG TTTCTTGAGGAGACATATGGATGACCAGGGCTGGGTTACCATTGCTCTTATAGCTGGCTTCAACAAGGTCCAGGAATCCCCTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTTATCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTGATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCACATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGAATGAAAACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCA CCAGTAGTTGAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCCTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGGTTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU108120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    acCCAAGCACCCAGTAGTTGAAGACGGTGCTGGTAA CTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATGCTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGGCGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGGTTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAA GGCATATGTAGAGGCAT CAAAGAAGATG AGGGGGGTGGGGGGAGCCA TTGGACATAATG AATGAAAGA CGATGGTGCGC TAAGTTAAAAGGCACTCGA GTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCT TGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAGAACAAAAAAAA                                                                                                                                                          ]
[+] EMBL CA998486             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGGTAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAA GGCATATGTAGAGGCAT CAAAGAAGATG AGGGGGGTGGGGGGAGCCA TTGGACATAATG AATGAAAGA CGATGGTGCGC TAAGTTAAAAGGCACTCGA GTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCT TGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAGAACTATGCATGATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTATTGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATAATTTATTGCCTTTTGATGAGCTCTCTGCTTTGTACCGTCTGAAAAAAAAAAAAAAAAAA]
[+] EMBL AA749756             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGTGGGGGGAGCCA TTGGACATAATG AATGAAAGA CGATGGTGCGC TAAGTTAAAAGGCACTCGACGTG  TAATATTGCAACTGCTGAATGGCCTTT  GCTGTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTTTCCCCCTGTTTGGATGTAACCCTCCAATTTTTNAAGGAG                                                                                                                                                                                                                                                                              ]


>consensus_10978#0 GAAGGATCGATCACCAACTCCAACTCCAACTCCAACTCCTCCTCCTCCTCCTCCTTCCGC CGCCGCCGCCGCCAGAGCATGGAACCCTCCGCCTCCGCGTCGGCTGATCCGCCCAGGAGG TCTCCATGGAGGCACCCCTCCAACGGGGGCAACCCCAACCCCAACGGAGACGCCGTCATC GACACAACTAGCTGGCCCGCGCTCTCCGAGGCCGCCAGGAACCCCCCCAAGCCTCCTCCT TGCATCGACTCTCCATACGAGGGCAAGCAGTCGTCTCGCCACAAGCCGGCCAGGCGCGGG GGTGCCGGTGCCGACCACTCCCCCTCCCCACGGGATGACCGCGCCACCAGCTGGGACCAT GGCCGCCACCACCACCACCACAACAGTGGTGGTAGGAGGGGCTCTTTTGGCGGCCGCAGG AGAGGAGGAGGAGGCGGGGGTTTCGACGCCTTGTACCGTGCCCCTATTGGCCCCTATGTG CGTGGTGCCACTGCGCCCCCGCCCCCGCCCCCGCCTCCCATGGCCGTTGCTCCTCCCCCC TTCCTTCCTCCGCCCTTACGACCTTTCGCGGCACCTCTCCTCTTTCATCACGATATGGCA TCGCCCGTCTCTCCTGTTTCCCCAATCTACTATGTTGGCCCTCCCCCTCCTCCAGAAGCT CTTAGGCCTTTGCCTCCTTTCCCCCCTACCATGCTTGCTCCACCTGCTTACCCTTACTAC CACCCTCAACCTCAACCCGACCCCGAGCCCGAGCCTGATGCTGATCCTCAACAACATCGT GCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTT TTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTC AACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCA TCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTG ATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCA CATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAA AACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCACCAGTAGTT GAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATG CTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGG CGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGG TTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGG TAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAAGGCATATGTAG AGGCATCAAAGAAGATGAGGGGGGTGGGGGGAGCCATTGGACATAATGAATGAAAGACGA TGGTGCGCTAAGTTAAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTG GGCTTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTT TGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGA AGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTT ACAAGTTTTGCTAGAACAAAAAAAAATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTAT TGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATA ATTTATTGCCTTTTGATGAGCTCTCTGCTTTGTACCGTCTGAAAAAAAAAAAAAAAAAA



consensusID : consensus_10978#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 374
fasta sequence
                              [NAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCTTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATNTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAGAACTATGCATGATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTATTGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATAATTTATTGCCTAAAAAAAAAAAAAAAAA]

[+] EMBL C97650               [NAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCTTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGACAAGGATNTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAGAACTATGCATGATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTATTGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATAATTTATTGCCTAAAAAAAAAAAAAAAAA]


>consensus_10978#1 NAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTGGGCTTGCGTGACTA TGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTTTGGATGTAACCCTC CAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGAAGTTGACAATTCGA CAAGGATNTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTTACAAGTTTTGCTAG AACTATGCATGATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTATTGGGAATTTGTGAT AAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATAATTTATTGCCTAAA AAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10978#0      GAAGGATCGATCACCAACTCCAACTCCAACTCCAACTCCTCCTCCTCCTCCTCCTTCCGC 60
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CGCCGCCGCCGCCAGAGCATGGAACCCTCCGCCTCCGCGTCGGCTGATCCGCCCAGGAGG 120
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TCTCCATGGAGGCACCCCTCCAACGGGGGCAACCCCAACCCCAACGGAGACGCCGTCATC 180
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      GACACAACTAGCTGGCCCGCGCTCTCCGAGGCCGCCAGGAACCCCCCCAAGCCTCCTCCT 240
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TGCATCGACTCTCCATACGAGGGCAAGCAGTCGTCTCGCCACAAGCCGGCCAGGCGCGGG 300
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      GGTGCCGGTGCCGACCACTCCCCCTCCCCACGGGATGACCGCGCCACCAGCTGGGACCAT 360
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      GGCCGCCACCACCACCACCACAACAGTGGTGGTAGGAGGGGCTCTTTTGGCGGCCGCAGG 420
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      AGAGGAGGAGGAGGCGGGGGTTTCGACGCCTTGTACCGTGCCCCTATTGGCCCCTATGTG 480
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CGTGGTGCCACTGCGCCCCCGCCCCCGCCCCCGCCTCCCATGGCCGTTGCTCCTCCCCCC 540
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TTCCTTCCTCCGCCCTTACGACCTTTCGCGGCACCTCTCCTCTTTCATCACGATATGGCA 600
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TCGCCCGTCTCTCCTGTTTCCCCAATCTACTATGTTGGCCCTCCCCCTCCTCCAGAAGCT 660
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CTTAGGCCTTTGCCTCCTTTCCCCCCTACCATGCTTGCTCCACCTGCTTACCCTTACTAC 720
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CACCCTCAACCTCAACCCGACCCCGAGCCCGAGCCTGATGCTGATCCTCAACAACATCGT 780
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      GCCAACCTGCTCAAACAGATTGAGTTCTACTTCAGCAAGGATAACTTATGCACAGATGTT 840
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TTCTTGAGGAGAAATATGGATGACCAGGGCTGGGTTAACATTGCTCTTATAGCTGGCTTC 900
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      AACAAGGTCCAGGAATCCACTGATGACCTGCAATACATAAAAGACACAATCCAGTCCTCA 960
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TCTATACTGGAAATGCAGGATGACAAAATTAGGAGGCAGAATGATTGGAACAAGTGGGTG 1020
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      ATTCCTCGAGAGAGCAACACTGACGTGCTGCCAAGCCCTAACATCAACAATCTGACAGCA 1080
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CATCTTGGAAGCGTGGGTCTGCAGGAATCAGCAGCTAGCTCAAGTAGCATGGTGGATGAA 1140
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      AACCATCATGAGATTCTTACCAATGGACCAACTTCCGGTAACAACCAAGCACCAGTAGTT 1200
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      GAAGACGGTGCTGGTAAGCTCTAGCTATGATGGTACACATTGGCTCCAATCTGGCCCATG 1260
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CTATGACTACAAGGGTTTTGTCCGAGCGCGAGTGACAAATGTTTTGCAATTTTTTGATGG 1320
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      CGGTATGCTTGCGGGGCGCACTGACTAGTGAGTTCGTTTCTGGGGGGGTTTCAGGTAAGG 1380
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TTCTTTTTGTCTACCCTGTTATTGAGGTACCGTGAAGGTTTCAGCCTTTCAGGTGGTTGG 1440
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TAAAAAAAAAAAGAAGTGCTGTAGCTGAAACAAAAGACAGCAAACAGAAGGCATATGTAG 1500
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      AGGCATCAAAGAAGATGAGGGGGGTGGGGGGAGCCATTGGACATAATGAATGAAAGACGA 1560
consensus_10978#1      ------------------------------------------------------------
                                                                                   

consensus_10978#0      TGGTGCGCTAAGTTAAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTG 1620
consensus_10978#1      --------------NAAAGGCACTCGAGTGCTTAATATTGCAACTGCTGAATGGCCTTTG 46
                                      *********************************************

consensus_10978#0      GGCTTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTT 1680
consensus_10978#1      GGCTTGCGTGACTATGGGCCTGAAGTGTGCTGTGAACCATGTCGGTTTTCTCCCCCTGTT 106
                       ************************************************************

consensus_10978#0      TGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGA 1740
consensus_10978#1      TGGATGTAACCCTCCAATTTTTAAAGGAGGATCTGAACTTTCTCGCTCAGAGAGTCAGGA 166
                       ************************************************************

consensus_10978#0      AGTTGACAATTCGACAAGGATCTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTT 1800
consensus_10978#1      AGTTGACAATTCGACAAGGATNTTTTGCAACTCAACTCGTTGAAGTAGCGTTTGAATGTT 226
                       ********************* **************************************

consensus_10978#0      ACAAGTTTTGCTAGAACAAAAAAAAATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTAT 1860
consensus_10978#1      ACAAGTTTTGCTAGAACTATGCATGATGTTTCCTTGGGTGATTGTGAAAGCCAAGCCTAT 286
                       ***************** *   *  ***********************************

consensus_10978#0      TGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATA 1920
consensus_10978#1      TGGGAATTTGTGATAAGATGGCGATCCCCCATATTGAAACGATTTTCTGTAGCTCAAATA 346
                       ************************************************************

consensus_10978#0      ATTTATTGCCTTTTGATGAGCTCTCTGCTTTGTACCGTCTGAAAAAAAAAAAAAAAAAA 1979
consensus_10978#1      ATTTATTGCCT------------------------------AAAAAAAAAAAAAAAAA- 374
                       ***********                              ***************** 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)