These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11046#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1718 fasta sequence [ATTACAACAAGAAGCTGATGTTGGTTTTGAAATTGATTATGTTGCCAGATATATTGAAGAAGGAGGTCTTACTGGTGAGCGCAAACGCTGGGTGCCTCGAAGAGGCAAAACTCCCTTAGATCCAGATGAGTTTGGGTTTGCCTATTCAAATCCAATAGAGACATCATTTAAACAGCGCTGCTTTGAGGAATTGAAGTTATATCATCGCAAACTTCTAATAACATTGAGAAATGAAGGCCCTGGTATTTTAGGTGATGTATCTGAAGATGATGTACGAAGAGTTATTGAAAGACTAAAAAAGTTAGTTGTAGGGCCAAAGAAAAATGTTGTTAAGCCCAAGGCAGCTAGCAAAATGGTAGTATCTGAGTTGAAGACTGAGCTAGAGGCACAAGGGTTGCCTACAGATGGAACTAGGCAGGTACTTTACCAGAGAGTTCAAAAGGCTAGGAGAATCAATCGTTCACGTGGTATACCACTTTGGGTTCCTCCTGTGGAAGATGAGGAAGAGGTTGATGAAGAGTTAGATGAATTGATTTCACGAATCAAGCTAGAAGATGGGAATACAGAGTTTTGGAAGCGGCGTTTCCTGGGAGAAACTCGGAATTATCTTTGTGAAGAAGTTAATGATGAAGAAGATGCAGATTTAGATGACGATGAGTTGGATGATGATGACGACGAAGATGACGACGACGATGATACCACAAAAGGAGAAGAAGATGAGATCGATGAGGAGGATGCTGTTGAACAAACGGAAAATCAAGCCGGAGATGAAACTAAAGACAAACCATCGAAAGGACCCAAGCAGCATCTTCAAATGATAGGAGTCCAGTTATTAAAGGATCTAGAAAAGACATCTGTTTCATCAAAGAAGTCAAAAAGGGTACCTGAGATTGATGATGATGAAGATTGGTTTCCTGAAGACCCAATTGAAGCTTTTAAGGTTATGCGTGAGACAAGGTTGTTCGATGTGTCAGATATGTATACTACTGCAGATGCTTGGGGATGGACATGGGAAAGAGAGATAAAGAATAAGATGCCACGCAAGTGGTCACAAGAATGGGA-GGTTGAGTTGGCTATCAAGATAATGCATAAGGTGATAGATCTT-GGTGGTA-CCCCAACGATTGGAGATTGTGCCATTATATTGCGGGCTGCAATGAGAGTGCCGCTCCCGTCTGCATTTATGACAATATTGCAAACAACGCATAGCCTTGGCTACAAATTTGGAAGCCCTCTGTACGACGAGGCGATCTTGCTGTGCCTTGATCTGGAGGAGATCGACGCGGCCATTGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTCTGCGCTCCAACCGCCACCTGCAGAGGAGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC-ATAGAATCATCAGCTCCATGCCATGGATCATTTGTCTTGAGCTCGCCAGATCAACCTTTGGCAGTGATGTGAGATCA-CTGCTCTGATGATAATCTGTCAAGGTGGAGAAAG-ATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTCGATGTATTTACAGACAACCAATTTTGATACTCCTAGATGAAATGGAATTGAAACTGCTTGGAAGTTGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CB648475 [ATTACAACAAGAAGCTGATGTTGGTTTTGAAATTGATTATGTTGCCAGATATATTGAAGAAGGAGGTCTTACTGGTGAGCGCAAACGCTGGGTGCCTCGAAGAGGCAAAACTCCCTTAGATCCAGATGAGTTTGGGTTTGCCTATTCAAATCCAATAGAGACATCATTTAAACAGCGCTGCTTTGAGGAATTGAAGTTATATCATCGCAAACTTCTAATAACATTGAGAAATGAAGGCCCTGGTATTTTAGGTGATGTATCTGAAGATGATGTACGAAGAGTTATTGAAAGACTAAAAAAGTTAGTTGTAGGGCCAAAGAAAAATGTTGTTAAGCCCAAGGCAGCTAGCAAAATGGTAGTATCTGAGTTGAAGACTGAGCTAGAGGCACAAGGGTTGCCTACAGATGGAACTAGGCAGGTACTTTACCAGAGAGTTCAAAAGGCTAGGAGAATCAATCGTTCACGTGGTATACCACTTTGGGTTCCTCCTGTGGAAGATGAGGAAGAGGTTGATGAAGAGTTAGATGAATTGATTTCACGAATCAAGCTAGAAGATGGGAATACAGAGTTTTGGAAGCGGCGTTTCCTGGGAGAAACTCGGAATTATCTTTGTGAAGAAGTTAATGATGAAGAAGATGCAGATTTAGATGACGATGAGTTGGATGATGATGACGACGAAGATGACGACGACGATGATACCACAAAAGGAGAAGAAGATGAGATCGATGAGGAGGATGCTGTTGAACAAACGG ] [+] EMBL CA765222 [ GATGGAACTAGGCAGGTACTTTACCAGAGAGTTCAAAAGGCTAGGAGAATCAATCGTTCACGTGGTATACCACTTTGGGTTCCTCCTGTGGAAGATGAGGAAGAGGTTGATGAAGAGTTAGATGAATTGATTTCACGAATCAAGCTAGAAGATGGGAATACAGAGTTTTGGAAGCGGCGTTTCCTGGGAGAAACTCGGAATTATCTTTGTGAAGAAGTTAATGATGAAGAAGATGCAGATTTAGATGACGATGAGTTGGATGATGATGACGACGAAGATGACGACGACGATGATACCACAAAAGGAGAAGAAGATGAGATCGATGAGGAGGATGCTGTTGAACAAACGGAAAATCAAGCCGGAGATGAAACTAAAGACAAACCATCGAAAGGACCCAAGCAGCATCTTCAAATGATAGGAGTCCAGTTATTAAAGGATCTAGAAAAGACATCTGTTTCATCAAAGAAGTCAAAAAGGGTACCTGAGATTGATGATGATGAAGATTGGTTTCCTGAAGACCCAATTGAAGCTTTTAAGGTTATGCGTGAGACAAGGTTGTTCGATGTGTCAGATATGTATACTACTGCAGATGCTTGGGGATGGACATGGGAAAGAGAGAGAAAGAATAAGATGCCACGCAAGTGGTCACAAGAATGGGAGGGTTGAGTTGGCTATCAAGATAATGCATAAGGNGATAGATCTTGGGNGGTACCCCCAACGATTGGAGATTGGGNCATTATATTGCGGGCTGCAATGAAAGTGCCGCTNCCGTCTGCATTTATGACA ] [+] EMBL AK059107 [ TGAAACTAAAGACAAACCATCGAAAGGACCCAAGCAGCATCTTCAAATGATAGGAGTCCAGTTATTAAAGGATCTAGAAAAGACATCTGTTTCATCAAAGAAGTCAAAAAGGGTACCTGAGATTGATGATGATGAAGATTGGTTTCCTGAAGACCCAATTGAAGCTTTTAAGGTTATGCGTGAGACAAGGTTGTTCGATGTGTCAGATATGTATACTACTGCAGATGCTTGGGGATGGACATGGGAAAGAGAGATAAAGAATAAGATGCCACGCAAGTGGTCACAAGAATGGGA GGTTGAGTTGGCTATCAAGATAATGCATAAGGTGATAGATCTT GGTGGTA CCCCAACGATTGGAGATTGTGCCATTATATTGCGGGCTGCAATGAGAGTGCCGCTCCCGTCTGCATTTATGACAATATTGCAAACAACGCATAGCCTTGGCTACAAATTTGGAAGCCCTCTGTACGACGAGGCGATCTTGCTGTGCCTTGATCTGGAGGAGATCGACGCGGCCATTGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTCTGCGCTCCAACCGCCACCTGCAGAGGAGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC ATAGAATCATCAGCTCCATGCCATGGATCATTTGTCTTGAGCTCGCCAGATCAACCTTTGGCAGTGATGTGAGATCA CTGCTCTGATGATAATCTGTCAAGGTGGAGAAAG ATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTCGATGTATTTACAGACAACCAATTTTGATACTCCTAGATGAAATGGAATTGAAACTGCTTGG ] [-] EMBL CB648476 [ GATGATGAAGATTGGTTTCCTGAAGACCCAATTGAAGCTTTTAAGGTTATGCGTGAGACAAGGTTGTTCGATGTGTCAGATATGTATACTACTGCAGATGCTTGGGGATGGACATGGGAAAGAGAGATAAAGAATAAGATGCCACGCAAGTGGTCACAAGAATGGGA GGTTGAGTTGGCTATCAAGATAATGCATAAGGTGATAGATTTT GGTGGTA CCCCAACGATTGGAGATTGTGCCATTATATTGCGGGATGCAATGAGAGTGCCGCTCCCGTCTGCATTTATGACAATATTGCAAACAACGCATAGCCTTGGCTACAAATTTGGAAGCCCTTTGTACGACGAGGCGATCTTGCTGTGCCTTGATCTGGAGGAGATCGACGCGGCCATTGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTATGTGCTCCAACCGCCACCTGCAGAGGAGTAATTTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC ATAGAATCATCAGCTCCATGCCATGGATCATTTGTCTTGAGCTCGCCAGATCAACCTTTGGCAGTGATGTGAGATCATCTGCTTTGATGATAATCTGTCAAGGTGGAGAAAGCATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTTGATGTATTTACAGACAACCAATTTTGATACTCCTAGATGAAATGGAATTGAAACTGCTTGGAAGTTGGAACccg ] [-] EMBL CB643803 [ AAGATT GTTTCCTGAAGACCCAATTGAAGCTTTTAAGGTTATGCGTGAGACAAGGTTGTTCGATGTGTCAGATATGTATACTACTGCAGATGCTTGGGGATGGACATGGGAAAGAGAGATAAAGAATAAGATGCCACGCAAGTGGTCACAAGAATGGGA GGTTGAGTTGGCTATCAAGATAATGCATAAGGTGATAGATCTT GGTGGTA CCCCAACGATTGGAGATTGTGCCATTATATTGCGGGCTGCAATGAGAGTGCCGCTCCCGTCTGCATTTATGACAATATTGCAAACAACGCATAGCCTTGGCTACAAATTTGGAAGCCCTCTGTACGACGAGGCGATCTTGCTGTGCCTTGATCTGGAGGAGATCGACGCGGCCATTGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTCTGCGCTCCAACCGCCACCTGCAGAGGAGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC ATAGAATCATCAGCTCCATGCCATGGATCATTTGTCTTGAGCTCGCCAGATCAACCTTTGGCAGTGATGTGAGATCA CTGCTCTGATGATAATCTGTCAAGGTGGAGAAAG ATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTCGATGTATTTACAGACAACCAATTTTGATACTCCTAGATGAAGGGGAATTGAAACTGCTTGGA ] [-] EMBL CA762204 [ GAGAGAAAGATTAAGGTGCCACGCGAGTGGTCACAAGAATGGGA GGTTGAGTTGGCTATCAAGATAATGCATAAGGTGATAGATCTT GGTGGTA CCCCAACGATGGGAGATTGTGCCATTATATTGCGGGCTGCAATGAGAGTGCCGCTCCGGTCTGCATTTATGACAATATTGCAAACAACGCATAGCCTTGGCTACAAATTTGGAAGCCCTCTGTACGACGAGGCGATCTTGCTGTGCCTTGATCTGGAGGAGATCGACGCGGCCATTGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTTTGCGCTCCAACCGCCACCTGCAGAGGAGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC ATAGAATCATCAGCTCCATGCCATGGATCGTTTGTCTTGAGCTCGCCAGATCATCCTTTGGCAGTGATGTGAGATCA CTGCTCTGATGATAATCTGTCAAGGTGGAGAAAG ATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTCGATGTATTTACAGGCAACCAATTTTGATACTCCTAGATGAAATGGAATTGAAACTGCTTGGAAGTTGGAACAAAAAAA ] [+] EMBL OS38122 [ caATCTGGAGGAGATCGACGCGGCCATNGCGGTGGTAGCAGAAATGGAGACAAATGGAATCAAGGAACCCGACGAGACCTTGGACAAGGTGCTCGCAGC AAACAATCTGGTGG AACTCTGCGCTCCAACCGCCACCTGCAGAGGAGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCACAATAGAATCATCAGCTCCATGCCATGGATCggt ] [+] EMBL AU101983 [ TGGAGACAAATGGAATCAAGGTACCCGACGAGACCTTGGACAAGGTGCTCGCAGCTAAACAATCTGGTGGAAACTCTGCGCTCCAACCGCCACCTGCAGAGGNGTAATCTGATTGGAACAAGAAGCCCCTTTGTAGCCATGATCTAGCACACCAC ATAGAATCATCAGCTCCATGCCATGGATCATTTGTCTTGAGCTCGCCAGATCAACCTTTGGCAGTGATGTGAGATCA CTGCTCTGATGATAATCTGTCAAGGTGGAGAAAG ATGATCTTATGCTTTGCCCTTGTTGGCCTTCCACTCCACACTCGATGTATTTACAGACAACCAATTTTGATACTCCTAGATGAAATGGAATTGAAACTGCTTGGAAGTTGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||