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Oryza sativa
cluster # 11069 cluster # 11069       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11069#0 length = 2267 sequences # 7  
consensus_11069#1 length = 270 sequences # 1  

consensusID : consensus_11069#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2267
fasta sequence
                              [AGATTTTGCTCGCTTTCTCCAACCTCTCCTCCGCTCCGAAGCGGAGGTCGGCGGCGGTGGCGGCGGCGGCGGCGCGTTTCCCCGGCGAGTAAGGAGAAATGGACCTTGCATCTCAAGGTGTGGTAACACAACGACAAAAACCAAGTGGACGGAGACCGGTTGGAAGCTCACAAATCTGGACGCGATATGGTGTTCTGCTTCCCAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAGGATTTACTATTGATCGTTCTTTGCTTACAGCCTTTTGTGAGAGATGGAACAATGAAACAAATACTGCACATTTCATGGGATTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGAGGCGGATGTGTTTGCATTTCTTAGGAGAGAGCCCTGGAGATGGAGAGCAACTGTGTGGCTTAATCAGATTGACATGGTTGTACAGGAAATTTCATCAATTGCCAGAAAATCCAACTATCAACGAGATTGCTTACAGCACCCGGGCATACCTTCTTTACCTTGTTGGCTCCACCTTATTTCCTGACACGATGAGGGGATTTGTATCACCAAGATATTTACCTCTTCTGGCTGATTTTAGAAAGATACGTGAATATGCCTGGGGATCTGCAGCCCTTGCTCATTTGTACAGAGGACTATCTGTTGCTGTAACACCGAATGCTACTACCCAGTTTCTCGGCAGTGCAACTTTGCTCATGGCTTGGATTTATGAATATCTTCCATTAACTCAACCCCAACAAAAGAATCAGAACACCTTGCTGCCCCGGGCCTGTCGATGGAACTTTGGAGGAGCAACGCGTGGACAGAGAAAGAAAGTCATGGAATGGAGAAAAGTTTTCGATGAGCTTCAATTTTCTGATGTCAACTGGAATCCTTACAAGGACATGAATCCTGCAATTATTCCAGAATATTGCATTGCAGCAGATAACATCTGCTATTCTCGGACATGGCTAATCAGCTTTAACATAGAAGAGGTGTATGTACCTGATCGGTTTTCTAGGCAGTTTGGGAGGGAACAAGGTCGCCTCCATGGGGTGCCCATGTGGGCAAGAAGAACTTGGAGCAAGTGGAAGGACTGGAGGGTTGAGTATGCTCGTGAAATCGAGGAGTTCCATCAATTGGTTGGCTGTCGTTTCACTCCTGCAGAAACCAATATCAACTCCCTCCCAATTGAGTCTATAACTAAACAAGATGCTGCAGGATGTAGTCGGAGCACATCTCAGAACTTCTCTTCAATGGTTGAAGATCTGAGGAATGATTTTCCAGTAATTGATCGTTACCTGGAGGGACAGTTACTCCCTGTGGAAGTTGCAAGCTTTCTAGAGAGAGTGGGTATGATGATCAAGAGTTACTCCCCACCACAGAGTAGCCGAAAG-AAAGATCAAGCAGGGCAGGGCCAGGACAGCAATGTCAGGTCAAAGAACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGCCCTCCGAACTCAAGGGCGGACCGATTCCCAGCCGTGCTGATACCTTATCAGGATAGCAAGTGCGACATGGTTCTGGATGGCACCGTCCCTCTGCTCGATGGAGCGGAGGAGTTCAAGGAACAAGGGGTCATGGACCTCTGGCAGAACTCCCACCTGACGACGCCGTCCTGTTCCTCGCTGGACTCGAGCTCGCCGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCGAGAACCTCCGAAGGAGCGGGCGTCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACGGGGTGGGAGCCGAGGCGACCAACCCGATC-TTCCTCTGATCAT-CCA-TGGTTTATGTACAAAGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACT-GGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCCTTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTTGCAACATGGTGAATTGGTGATTTTATAATGATGCTAAGCTTTGACTGC]

[+] EMBL AK103361             [AGATTTTGCTCGCTTTCTCCAACCTCTCCTCCGCTCCGAAGCGGAGGTCGGCGGCGGTGGCGGCGGCGGCGGCGCGTTTCCCCGGCGAGTAAGGAGAAATGGACCTTGCATCTCAAGGTGTGGTAACACAACGACAAAAACCAAGTGGACGGAGACCGGTTGGAAGCTCACAAATCTGGACGCGATATGGTGTTCTGCTTCCCAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAGGATTTACTATTGATCGTTCTTTGCTTACAGCCTTTTGTGAGAGATGGAACAATGAAACAAATACTGCACATTTCATGGGATTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGAGGCGGATGTGTTTGCATTTCTTAGGAGAGAGCCCTGGAGATGGAGAGCAACTGTGTGGCTTAATCAGATTGACATGGTTGTACAGGAAATTTCATCAATTGCCAGAAAATCCAACTATCAACGAGATTGCTTACAGCACCCGGGCATACCTTCTTTACCTTGTTGGCTCCACCTTATTTCCTGACACGATGAGGGGATTTGTATCACCAAGATATTTACCTCTTCTGGCTGATTTTAGAAAGATACGTGAATATGCCTGGGGATCTGCAGCCCTTGCTCATTTGTACAGAGGACTATCTGTTGCTGTAACACCGAATGCTACTACCCAGTTTCTCGGCAGTGCAACTTTGCTCATGGCTTGGATTTATGAATATCTTCCATTAACTCAACCCCAACAAAAGAATCAGAACACCTTGCTGCCCCGGGCCTGTCGATGGAACTTTGGAGGAGCAACGCGTGGACAGAGAAAGAAAGTCATGGAATGGAGAAAAGTTTTCGATGAGCTTCAATTTTCTGATGTCAACTGGAATCCTTACAAGGACATGAATCCTGCAATTATTCCAGAATATTGCATTGCAGCAGATAACATCTGCTATTCTCGGACATGGCTAATCAGCTTTAACATAGAAGAGGTGTATGTACCTGATCGGTTTTCTAGGCAGTTTGGGAGGGAACAAGGTCGCCTCCATGGGGTGCCCATGTGGGCAAGAAGAACTTGGAGCAAGTGGAAGGACTGGAGGGTTGAGTATGCTCGTGAAATCGAGGAGTTCCATCAATTGGTTGGCTGTCGTTTCACTCCTGCAGAAACCAATATCAACTCCCTCCCAATTGAGTCTATAACTAAACAAGATGCTGCAGGATGTAGTCGGAGCACATCTCAGAACTTCTCTTCAATGGTTGAAGATCTGAGGAATGATTTTCCAGTAATTGATCGTTACCTGGAGGGACAGTTACTCCCTGTGGAAGTTGCAAGCTTTCTAGAGAGAGTGGGTATGATGATCAAGAGTTACTCCCCACCACAGAGTAGCCGAAAG AAAGATCAAGCAGGGCAGGGCCAGGACAGCAATGTCAGGTCAAAGAACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGCCCTCCGAACTCAAGGGCGGACCGATTCCCAGCCGTGCTGATACCTTATCAGGATAGCAAGTGCGACATGGTTCTGGATGGCACCGTCCCTCTGCTCGATGGAGCGGAGGAGTTCAAGGAACAAGGGGTCATGGACCTCTGGCAGAACTCCCACCTGACGACGCCGTCCTGTTCCTCGCTGGACTCGAGCTCGCCGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCGAGAACCTCCGAAGGAGCGGGCGTCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACGGGGTGGGAGCCGAGGCGACCAACCCGATC TTCCTCTGATCAT CCA TGGTTTATGTACAAAGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACT GGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCCTTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTTGCAACATGGTGAATTGGTGATTTTATAATGATGCTAAGCTTTGACTGC]
[+] EMBL CB639654             [                     ACCTCTCCTCCGCTCCGAAGCGGAGGTCGGCGGCGGTGGCGGCGGCGGCGGCGCGTTTCCCCGGCGAGTAAGGAGAAATGGACCTTGCATCTCAAGGTGTGGTAACACAACAACAAAAACCAAGTGGACGGAGACCGGTTGGAAGCTCACAAATCTGGACGCGATATGGTGTTCTGCTTCCCAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAGGATTTACTATTGATCGTTCTTTGCTTACAGCCTTTTGTGAGAGATGGAACAATGAAACAAATACTGCACATTTCATGGGATTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGAGGCGGATGTGTTTGCATTTCTTAGGAGAGAGCCCTGGAAATGGAGAGCAACTGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OSS11177A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCAAGTGGAAGGACTGGAGGGTTGAGTATGCTCGTGAAATCGAGGAGTTCCATCAATTGGTTGGCTGTCGTTTCACTCCTGCAGAAACCAATATCAACTCCCTCCCAATTGAGTCTATAACTAAACAAGATGCTGCAGGATGTAGTCGGAGCACATCTCAGAACTTCTCTTCAATGGTTGAAGATCTGAGGAATGATTTTCCAGTAATTGATCGTTACCTGGAGGGACAGTTACTCCCTGTGGAAGTTGCAAGCTTTCTAGAGAGAGTGGGTATGATGATCAAGAGTTACTCCCCACCACAGAGTAGCCGAAAGAAAAGATCAAGCAGGGCAGGGCCAGGACAGCAATGTCAGGTCAAAGNACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGGCCTNCGAACTCAAGGGCGGACCGATTTCCAGCCGTGNTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CA764373             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGACAGCAATGTCAGGTCAAAGAACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGCCCTCCGAACTCAAGGGCGGACCGATTCCCAGCCGTGCTGATACCTTATCAGGATAGCAAGTGCGACATGGTTCTGGATGGCACCGTCCCTCTGCTCGATGGAGCGGAGGAGTTCAAGGAACAAGGGGTCATGGACCTCTGGCAGAACTCCCACCTGACGACGCCGTCCTGTTCCTCGCTGGACTCGAGCTCGCCGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCGAGAACCTCCGAAGGAGCGGGCGGCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACGGGGTGGGAGCCGAGGCAACCAACCCGATC TTCCTCTGATCAT CCA TGGTTTATGTACAAAGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACT GGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGGTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCCTTTTAACTGNGNTGCTCGNGAACTGGATTGNGCCCTCTTCCGNTTAATCTGCAGCTCTTGCAACATGGNGAATTGG                               ]
[+] EMBL BI809671             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AAGGGTTCATGGACCTCT GCAGAACTCCCACCTGACGAC CCGTCCTGTTCCTCGCTGGACTCGAGCTCGCCGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCGAGAACCTCCGAAGGAGCGGGCGGCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACGGGGT GGA CCGAGGCGACCAACCCGATC TTCCTCTGATCAT CCACTGGTTTATGTACAAAGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACT GGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGC AAATGTAGATGATGCCACCAAGACCCTTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTTGC ACATGGTGAATTGGTGATTTTAAAAaaaaaa              ]
[+] EMBL AU093409             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCCTCGCTGGACTCGAGCTCGCCGGAATCAAGGAANCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCGAGAACCTCCGAAGGAGCGGGCGTCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACGGGGTGGGAGCCGAGGCGACCAACCCGATC TTCCTCTGATCAT CCA TGGTTTATGTACAAAGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACT GGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCCTTTTAACTGTGTTGCTCGTGAAaaaa                                                                                 ]
[+] EMBL AU033010             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCAACCCGATCTTTCCTNTGATCATCCCA TGGTTTATGTACAAAGTAGCAGNAAAACTTGGGCTGCTGACAGTTAACTGGGTTTATGTAGCGTCGTAGACTTTTTGCTGGTAGCGCTTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATACTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCCTTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTTGCAACAaaaaaa                                    ]


>consensus_11069#0 AGATTTTGCTCGCTTTCTCCAACCTCTCCTCCGCTCCGAAGCGGAGGTCGGCGGCGGTGG CGGCGGCGGCGGCGCGTTTCCCCGGCGAGTAAGGAGAAATGGACCTTGCATCTCAAGGTG TGGTAACACAACGACAAAAACCAAGTGGACGGAGACCGGTTGGAAGCTCACAAATCTGGA CGCGATATGGTGTTCTGCTTCCCAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAA CTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAG GATTTACTATTGATCGTTCTTTGCTTACAGCCTTTTGTGAGAGATGGAACAATGAAACAA ATACTGCACATTTCATGGGATTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTC TTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGA GGCGGATGTGTTTGCATTTCTTAGGAGAGAGCCCTGGAGATGGAGAGCAACTGTGTGGCT TAATCAGATTGACATGGTTGTACAGGAAATTTCATCAATTGCCAGAAAATCCAACTATCA ACGAGATTGCTTACAGCACCCGGGCATACCTTCTTTACCTTGTTGGCTCCACCTTATTTC CTGACACGATGAGGGGATTTGTATCACCAAGATATTTACCTCTTCTGGCTGATTTTAGAA AGATACGTGAATATGCCTGGGGATCTGCAGCCCTTGCTCATTTGTACAGAGGACTATCTG TTGCTGTAACACCGAATGCTACTACCCAGTTTCTCGGCAGTGCAACTTTGCTCATGGCTT GGATTTATGAATATCTTCCATTAACTCAACCCCAACAAAAGAATCAGAACACCTTGCTGC CCCGGGCCTGTCGATGGAACTTTGGAGGAGCAACGCGTGGACAGAGAAAGAAAGTCATGG AATGGAGAAAAGTTTTCGATGAGCTTCAATTTTCTGATGTCAACTGGAATCCTTACAAGG ACATGAATCCTGCAATTATTCCAGAATATTGCATTGCAGCAGATAACATCTGCTATTCTC GGACATGGCTAATCAGCTTTAACATAGAAGAGGTGTATGTACCTGATCGGTTTTCTAGGC AGTTTGGGAGGGAACAAGGTCGCCTCCATGGGGTGCCCATGTGGGCAAGAAGAACTTGGA GCAAGTGGAAGGACTGGAGGGTTGAGTATGCTCGTGAAATCGAGGAGTTCCATCAATTGG TTGGCTGTCGTTTCACTCCTGCAGAAACCAATATCAACTCCCTCCCAATTGAGTCTATAA CTAAACAAGATGCTGCAGGATGTAGTCGGAGCACATCTCAGAACTTCTCTTCAATGGTTG AAGATCTGAGGAATGATTTTCCAGTAATTGATCGTTACCTGGAGGGACAGTTACTCCCTG TGGAAGTTGCAAGCTTTCTAGAGAGAGTGGGTATGATGATCAAGAGTTACTCCCCACCAC AGAGTAGCCGAAAGAAAGATCAAGCAGGGCAGGGCCAGGACAGCAATGTCAGGTCAAAGA ACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGCCCTCCGAACTCAA GGGCGGACCGATTCCCAGCCGTGCTGATACCTTATCAGGATAGCAAGTGCGACATGGTTC TGGATGGCACCGTCCCTCTGCTCGATGGAGCGGAGGAGTTCAAGGAACAAGGGGTCATGG ACCTCTGGCAGAACTCCCACCTGACGACGCCGTCCTGTTCCTCGCTGGACTCGAGCTCGC CGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACCG AGAACCTCCGAAGGAGCGGGCGTCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGACG GGGTGGGAGCCGAGGCGACCAACCCGATCTTCCTCTGATCATCCATGGTTTATGTACAAA GTAGCAGAAAAACTTGGGCTGCTGACAGTTAACTGGTTTATGTAGCGTCGTAGACTTTTT GCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATAC TATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACCC TTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTTG CAACATGGTGAATTGGTGATTTTATAATGATGCTAAGCTTTGACTGC



consensusID : consensus_11069#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 270
fasta sequence
                              [GTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAGGNTTTACTANTGNTCGNNNNTTNNTTANAANCCTTTTTGNGNGNTNGGNNCAATNAAACAAATACTGCACATTTCATGGGGTTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGAGGCGGATGTGTTTGCATTTCTT]

[+] EMBL OSS0985A             [GTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAGGNTTTACTANTGNTCGNNNNTTNNTTANAANCCTTTTTGNGNGNTNGGNNCAATNAAACAAATACTGCACATTTCATGGGGTTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTGAGGCGGATGTGTTTGCATTTCTT]


>consensus_11069#1 GTTCTAACTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTC ACCACAGGNTTTACTANTGNTCGNNNNTTNNTTANAANCCTTTTTGNGNGNTNGGNNCAA TNAAACAAATACTGCACATTTCATGGGGTTTGAAATGGCCCCATCACTCCGTGATGTTTC ATATATTCTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGA AGCTGTGAGGCGGATGTGTTTGCATTTCTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11069#0      AGATTTTGCTCGCTTTCTCCAACCTCTCCTCCGCTCCGAAGCGGAGGTCGGCGGCGGTGG 60
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CGGCGGCGGCGGCGCGTTTCCCCGGCGAGTAAGGAGAAATGGACCTTGCATCTCAAGGTG 120
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      TGGTAACACAACGACAAAAACCAAGTGGACGGAGACCGGTTGGAAGCTCACAAATCTGGA 180
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CGCGATATGGTGTTCTGCTTCCCAGCCAGCAGACACGGAAGCTAAAAGAATGGGTTCTAA 240
consensus_11069#1      -----------------------------------------------------GTTCTAA 7
                                                                            *******

consensus_11069#0      CTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAG 300
consensus_11069#1      CTGACGAACAGCAACAACTAGTTAATGCTAGTGGTCTTGGACATCTTGCCCTCACCACAG 67
                       ************************************************************

consensus_11069#0      GATTTACTATTGATCGTTCTTTGCTTACAGCCTTTTGTGAGAGATGG-AACAATGAAACA 359
consensus_11069#1      GNTTTACTANTGNTCGNNNNTTNNTTANAANCCTTTTTGNGNGNTNGGNNCAATNAAACA 127
                       * ******* ** ***    **  *** *  * *** ** * * * *   **** *****

consensus_11069#0      AATACTGCACATTTCATGGGATTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATT 419
consensus_11069#1      AATACTGCACATTTCATGGGGTTTGAAATGGCCCCATCACTCCGTGATGTTTCATATATT 187
                       ******************** ***************************************

consensus_11069#0      CTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTG 479
consensus_11069#1      CTTGGAATTCCAGTGACTGGTCATGTGGTGACTGCTGAGCCAATTGGTGATGAAGCTGTG 247
                       ************************************************************

consensus_11069#0      AGGCGGATGTGTTTGCATTTCTTAGGAGAGAGCCCTGGAGATGGAGAGCAACTGTGTGGC 539
consensus_11069#1      AGGCGGATGTGTTTGCATTTCTT------------------------------------- 270
                       ***********************                                     

consensus_11069#0      TTAATCAGATTGACATGGTTGTACAGGAAATTTCATCAATTGCCAGAAAATCCAACTATC 599
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AACGAGATTGCTTACAGCACCCGGGCATACCTTCTTTACCTTGTTGGCTCCACCTTATTT 659
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CCTGACACGATGAGGGGATTTGTATCACCAAGATATTTACCTCTTCTGGCTGATTTTAGA 719
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AAGATACGTGAATATGCCTGGGGATCTGCAGCCCTTGCTCATTTGTACAGAGGACTATCT 779
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GTTGCTGTAACACCGAATGCTACTACCCAGTTTCTCGGCAGTGCAACTTTGCTCATGGCT 839
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      TGGATTTATGAATATCTTCCATTAACTCAACCCCAACAAAAGAATCAGAACACCTTGCTG 899
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CCCCGGGCCTGTCGATGGAACTTTGGAGGAGCAACGCGTGGACAGAGAAAGAAAGTCATG 959
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GAATGGAGAAAAGTTTTCGATGAGCTTCAATTTTCTGATGTCAACTGGAATCCTTACAAG 1019
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GACATGAATCCTGCAATTATTCCAGAATATTGCATTGCAGCAGATAACATCTGCTATTCT 1079
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CGGACATGGCTAATCAGCTTTAACATAGAAGAGGTGTATGTACCTGATCGGTTTTCTAGG 1139
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CAGTTTGGGAGGGAACAAGGTCGCCTCCATGGGGTGCCCATGTGGGCAAGAAGAACTTGG 1199
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AGCAAGTGGAAGGACTGGAGGGTTGAGTATGCTCGTGAAATCGAGGAGTTCCATCAATTG 1259
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GTTGGCTGTCGTTTCACTCCTGCAGAAACCAATATCAACTCCCTCCCAATTGAGTCTATA 1319
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      ACTAAACAAGATGCTGCAGGATGTAGTCGGAGCACATCTCAGAACTTCTCTTCAATGGTT 1379
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GAAGATCTGAGGAATGATTTTCCAGTAATTGATCGTTACCTGGAGGGACAGTTACTCCCT 1439
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GTGGAAGTTGCAAGCTTTCTAGAGAGAGTGGGTATGATGATCAAGAGTTACTCCCCACCA 1499
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CAGAGTAGCCGAAAGAAAGATCAAGCAGGGCAGGGCCAGGACAGCAATGTCAGGTCAAAG 1559
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AACCCAAGAAAGAGGGGGAAGCCGTCATTCTTTCAAGATCCTTCAAGCCCTCCGAACTCA 1619
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AGGGCGGACCGATTCCCAGCCGTGCTGATACCTTATCAGGATAGCAAGTGCGACATGGTT 1679
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CTGGATGGCACCGTCCCTCTGCTCGATGGAGCGGAGGAGTTCAAGGAACAAGGGGTCATG 1739
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GACCTCTGGCAGAACTCCCACCTGACGACGCCGTCCTGTTCCTCGCTGGACTCGAGCTCG 1799
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CCGGAATCAAGGAAGCGGAGGCAGCAAGACCGCGACGAAATCCGGCTCCCCAGGGACACC 1859
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GAGAACCTCCGAAGGAGCGGGCGTCTCTGTGTGCAGCTGAAAATGTTCAAGCACAGGGAC 1919
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GGGGTGGGAGCCGAGGCGACCAACCCGATCTTCCTCTGATCATCCATGGTTTATGTACAA 1979
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      AGTAGCAGAAAAACTTGGGCTGCTGACAGTTAACTGGTTTATGTAGCGTCGTAGACTTTT 2039
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      TGCTGGTAGCGCCTTGCCATTCACTGCGCAGAGCTTGCAAGCTTTATCTCCTTGTTAATA 2099
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CTATCTCTCTCTAGTCTCTACCATGTAGTTGGGCAAAATGTAGATGATGCCACCAAGACC 2159
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      CTTTTAACTGTGTTGCTCGTGAACTGGATTGTGCCCTCTCCCGTTTAATCTGCAGCTCTT 2219
consensus_11069#1      ------------------------------------------------------------
                                                                                   

consensus_11069#0      GCAACATGGTGAATTGGTGATTTTATAATGATGCTAAGCTTTGACTGC 2267
consensus_11069#1      ------------------------------------------------
                                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)