These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11128#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2775 fasta sequence [GCTGTAGCTGGCCTGCACTGCACGCCTGGAGTCGTGCAGCCAGAAAGGCAAGGCTGCACACTTGCTGCCGCTCTCGCCTCCCCATACTCAGTACAGTAGCTAGGAAGAAGGCAAGGGAAGGGCATGGCGACGCTGCCGGACCTGGGTGTGTCCGCCTTCATCAACATCTTGGGCGCCTTCGTCTTCCTCCTCATCTTCGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTCTACTTCCCCAAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTCGTCAACCTCGACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGCATGTCCCAGCCCGACCTCATCCACCACGCCGGCCTCGACTCCGCCGTCTACCTCCGAATCTACACGCTCGGCCTCAAGATATTTTTGCCCATCATGACTGTCGCCTTGCTGGTTCTTATTCCAGTTAATGTCTCTGGTGGCACGTTACTTAATTTACGAAAAGAAATTGTCTTTAGTGATATTGATAAGCTTTCCATATCAAATGTCAACCCTGGATCCAACAGGTTCTTTATCCATCTATTAATGGCATATGTGTTCACTTTTTGGACTTGCTTTATGCTATACAAAGAGTATAGCAATGTGGCATTTATGAGATTGCACTTCCTGGCTTCTCAGAAGCGTTGTGCTGATCAGTTCACTGTGATTGTTAGAAACATACCTCATGTTTCAAGCCATTCAACATCTGAAACAGTGGATGAATTCTTCCGTAGGAATCATCCAGACCACTATCTTGGTCAGCAGGCTGTTTATAACGCAAACAGGTATGCTAAACTTGTGAAGAAAAAAGAGAGGCTTCAAAACTGGTTGGATTACTACCAGCTGAAGTTTGAAAGGCATCCTGGAAAAAGACCAATTGGAAGGACAGGGTGCCTTGGTTTCTGCGGTAGAGAAGTGGATCAAATCGACTATTACCGTGCTAGAATCAGCGAGCTTGATAAGAAGCTTGCATCTGAGCGTCAAAGAGTCCTCAATGACCCAAAAGCTGTTATGCCAGTTGCTTTTGTGACATTTGACTCGAGATGGGGAGCTGCTGTATGTGCACAGACACAACAGTCAAAGAATCCTACCCAATGGCTAACTGATTGGGCTCCTGAACCGCGGGATGTATATTGGCAGAATCTTGCCATTCCATTTTTCTCTCTCAGTATCCGCAAGTTCCTGATATCCATTGCAGTTTTTGCTCTGGTGTTCTTCTACATGATACCTATAGCTTTTGTGCAATCACTTGCCAATCTTGAGGGTATTGAAAAAGTTGCACCTTTCCTAAGGCCTGTGATAGACACACCAGTGGTGAAATCCTTCCTGCAGGGTTTCCTTCCGGGTTTGGCTTTGAAGATTTTTCTGTATATCCTCCCAACGGTTTTGATGATTATGTCAAAGGTTGAAGGTTATGTGTCTTTATCATCTCTGGAAAGGAGGGCTGCTTCAAAATATTACTACTTCATGCTGGTGAATGTATTTCTTGGAAGCATAATCGCTGGCACAGCTTTTGAACAGCTAAATGCATTTTTCCATCAGCCACCTTCACAAATACCAAGGACCATTGGAGTAGCTATACCAATGAAAGCTACATTTTTTATGACATACATAATGGTTGACGGGTGGGCTGGCATCGCGAACGAGATTCTTCGAGTGAAGCCGCTGGTGATATACCACCTGAAGAACATGTTTATTGTGAAGACGGAGCGGGACAGGGAGAGGGCAATGGATCCGGGCAGCATTGGGCTTGCAGAGAACCTCCCATCACTGCAGCTGTATTTTCTTCTTGGGCTTGTGTATGCTGTGGTCACCCCCATTCTCCTCCCTTTCATTATCATCTTCTTTGCCTTCGCTTTCCTCGTGTACAGACACCAGATCATCAACGTGTACAACCAAGAATACGAGAGTGCTGCTGCGTTTTGGCCTCAGGTGCACTCTCGCATAATAGCGAGCTTGCTGATCTCGCATGTAACTCTGTTTGGGCTGATGAGCACCATGAAGGCTGCCTACTCCACCCCGCTGCTTATCTTTCTGCCACTCCTCACCATATGGTTCCACAAGTACTGCAAGAGCCGTTTCGAGCCTGCTTTCCGCAAGTACCCTCTAGAGGAAGCGATGGAGAAGGACAATCTGGAGCGCACGTCGGAGCCAAACCTGAACCTCAAATCGTACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAGCAGCAGCAGCAGCAGGAGCAGGAGCAGCAACGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCGCAGCAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCTACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCTCTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGGTGATATTTTTATTCCTCTAATTAACGACCGACTGGCTGCTGATAATTATTTAATGATCTGTTGTAAATGCGAATATGTGAGTTGATTGAGTGTGTATATGCACGTAAATCGGAAAAATTCCAATTTGACTCCCTCGAAAAA] [+] EMBL AK102587 [GCTGTAGCTGGCCTGCACTGCACGCCTGGAGTCGTGCAGCCAGAAAGGCAAGGCTGCACACTTGCTGCCGCTCTCGCCTCCCCATACTCAGTACAGTAGCTAGGAAGAAGGCAAGGGAAGGGCATGGCGACGCTGCCGGACCTGGGTGTGTCCGCCTTCATCAACATCTTGGGCGCCTTCGTCTTCCTCCTCATCTTCGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTCTACTTCCCCAAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTCGTCAACCTCGACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGCATGTCCCAGCCCGACCTCATCCACCACGCCGGCCTCGACTCCGCCGTCTACCTCCGAATCTACACGCTCGGCCTCAAGATATTTTTGCCCATCATGACTGTCGCCTTGCTGGTTCTTATTCCAGTTAATGTCTCTGGTGGCACGTTACTTAATTTACGAAAAGAAATTGTCTTTAGTGATATTGATAAGCTTTCCATATCAAATGTCAACCCTGGATCCAACAGGTTCTTTATCCATCTATTAATGGCATATGTGTTCACTTTTTGGACTTGCTTTATGCTATACAAAGAGTATAGCAATGTGGCATTTATGAGATTGCACTTCCTGGCTTCTCAGAAGCGTTGTGCTGATCAGTTCACTGTGATTGTTAGAAACATACCTCATGTTTCAAGCCATTCAACATCTGAAACAGTGGATGAATTCTTCCGTAGGAATCATCCAGACCACTATCTTGGTCAGCAGGCTGTTTATAACGCAAACAGGTATGCTAAACTTGTGAAGAAAAAAGAGAGGCTTCAAAACTGGTTGGATTACTACCAGCTGAAGTTTGAAAGGCATCCTGGAAAAAGACCAATTGGAAGGACAGGGTGCCTTGGTTTCTGCGGTAGAGAAGTGGATCAAATCGACTATTACCGTGCTAGAATCAGCGAGCTTGATAAGAAGCTTGCATCTGAGCGTCAAAGAGTCCTCAATGACCCAAAAGCTGTTATGCCAGTTGCTTTTGTGACATTTGACTCGAGATGGGGAGCTGCTGTATGTGCACAGACACAACAGTCAAAGAATCCTACCCAATGGCTAACTGATTGGGCTCCTGAACCGCGGGATGTATATTGGCAGAATCTTGCCATTCCATTTTTCTCTCTCAGTATCCGCAAGTTCCTGATATCCATTGCAGTTTTTGCTCTGGTGTTCTTCTACATGATACCTATAGCTTTTGTGCAATCACTTGCCAATCTTGAGGGTATTGAAAAAGTTGCACCTTTCCTAAGGCCTGTGATAGACACACCAGTGGTGAAATCCTTCCTGCAGGGTTTCCTTCCGGGTTTGGCTTTGAAGATTTTTCTGTATATCCTCCCAACGGTTTTGATGATTATGTCAAAGGTTGAAGGTTATGTGTCTTTATCATCTCTGGAAAGGAGGGCTGCTTCAAAATATTACTACTTCATGCTGGTGAATGTATTTCTTGGAAGCATAATCGCTGGCACAGCTTTTGAACAGCTAAATGCATTTTTCCATCAGCCACCTTCACAAATACCAAGGACCATTGGAGTAGCTATACCAATGAAAGCTACATTTTTTATGACATACATAATGGTTGACGGGTGGGCTGGCATCGCGAACGAGATTCTTCGAGTGAAGCCGCTGGTGATATACCACCTGAAGAACATGTTTATTGTGAAGACGGAGCGGGACAGGGAGAGGGCAATGGATCCGGGCAGCATTGGGCTTGCAGAGAACCTCCCATCACTGCAGCTGTATTTTCTTCTTGGGCTTGTGTATGCTGTGGTCACCCCCATTCTCCTCCCTTTCATTATCATCTTCTTTGCCTTCGCTTTCCTCGTGTACAGACACCAGATCATCAACGTGTACAACCAAGAATACGAGAGTGCTGCTGCGTTTTGGCCTCAGGTGCACTCTCGCATAATAGCGAGCTTGCTGATCTCGCATGTAACTCTGTTTGGGCTGATGAGCACCATGAAGGCTGCCTACTCCACCCCGCTGCTTATCTTTCTGCCACTCCTCACCATATGGTTCCACAAGTACTGCAAGAGCCGTTTCGAGCCTGCTTTCCGCAAGTACCCTCTAGAGGAAGCGATGGAGAAGGACAATCTGGAGCGCACGTCGGAGCCAAACCTGAACCTCAAATCGTACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAGCAGCAGCAGCAGCAGGAGCAGGAGCAGCAACGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCGCAGCAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCTACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCTCTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGGTGATATTTTTATTCCTCTAATTAACGACCGACTGGCTGCTGATAATTATTTAATGATCTGT ] [+] EMBL OSC107071 [ ACGCTGCCGGACCTGGGTGTGTCCGCCTTCATCAACATCTTGGGCGCCTTCGTCTTCCTCCTCATCTTCGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTCTACTTCCCCAAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTCGTCAACCTCGACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGCATGTCCCAGCCCGACCTCATCCACCACGGCGGNCTNGACTTCGGCGTCTAACTTCGAATCTACANGGTNGGCCTTAAGATATTTTTGNCCATAATGANTGTTGGCTTGnt ] [+] EMBL AU181632 [ CGCCGCCCTCCGCCTCCAGCCCATCAACGACCGCGTCTACTTCCCCAAGCTCTACCTCACTGGCCAGCGACGCCACCACCCTCACCCTCATGGCTTCGTCAACCTCGACCTCTGCTCCTACCTCCGCTTCCTCGCCTGGGTCCCCGGCGCCCTCCGCATGTCCCAGCCCGACCTCATCCACCACGCCGGCCTCGACTCCGCCGTCTACCTCCGAATCTACACGCTCGGCCTCAAGATATTTTTGCCCATCATGACTGTCGCCTTGCTGGTTCTTATTCCAGTTAATGTCTCTGGTGGCACGTTACTTAATTTACGAAAAGAAATTGTCTTTAGTGATATTGATAAGCTTTCCATATCAAATGTCAACCCTGGATCCAACAGGTTCTTTATCCATCTATTAATGGCATATGTGTTCACTTTTTGGAC ] [+] EMBL CB641848 [ TGTGCTGATCAGTTCACTGTGATTGTTAGAAACATACCTCATGTTTCAAGCCATTCAACATCTGAAACAGTGGATGAATTCTTCCGTAGGAATCATCCAGACCACTATCTTGGTCAGCAGGCTGTTTATAACGCAAACAGGTATGCTAAACTTGTGAAGAAAAAAGAGAGGCTTCAAAACTGGTTGGATTACTACCAGCTGAAGTTTGAAAGGCATCCTGGAAAAAGACCAATTGGAAGGACAGGGTGCCTTGGTTTCTGTGGTAGAGAAGTGGATCAAATCGACTATTACCGTGCTAGAATCAGCGAGCTTGATAAGAAGCTTGCATCTGAGCGTCAAAGAGTTCTCAATGACCCAAAAGCTGTTATGCCAGTTGCTTTTGTGACATTTGACTCGAGATGGGGAGCTGCTGTATGTGCACAGACACAACAGTCAAAGAATCCTACCCAATGGCTAACTGATTGGGCTCCTGAACCGCGGGATGTATATTGGCAGAATCTTGCCATTCCATTTTTCTCTCTCAGTATCCGCAAGTTCCTGATATCCATTGCAGTTTTTGCTCTGGTGTTCTTCTACATGATACCTATAGCTTTTGTGCAATCACTTGCCAATCTTGAGGGTATTGAAAAAGTTGCACCTTTCCTAAGGCCTGTGATAGACACACCAGTGGTGAAATCCTTCCTGCAGGGTTTCCTTCCGGGTTTGGCTTTGAAGATTTTTCTGTATATCCTCCCAACGGTTTTGATGATTATGTCAAAGGTTGAAGGGTATGTGTCTTTATCATCTCTGGAAAGGAGGGCTGCTTCAAAATATTACT ] [-] EMBL CB641849 [ TCCTCGTGTACAGACACCAGATCATCAACGTGTACAACCAAGAATACGAGAGTGCTGCTGCGTTTTGGCCTCAGGTGCACTCTCGCATAATAGCGAGCTTGCTGATCTCGCATGTAACTCTGTTTGGGCTGATGAGCACCATGAAGGCTGCCTACTCCACCCCGCTGCTTATCTTTCTGCCACTCCTCACCATATGGTTCCACAAGTACTGCAAGAGCCGTTTCGAGCCTGCTTTCCGCAAGTACCCTCTAGAGGAAGCGATGGAGAAGGACAATCTGGAGCGCACGTCGGAGCCAAACCTGAACCTCAAATCGTACCTGCAGAACGCTTACCTGCACCCCATTTTCCACATGTTTGAGCAGCAGCAGCAGCAGGAGCAGGAGCAGCAACGGGAGGAGAAGGTAGAGGTGCGAATCGACAAGGCGCAGCAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCTACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCTCTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGGTGATATTTTTATTCCTCTAATTAACGACCGACTGGCTGCTGATAATTATTTAAT ] [+] EMBL AU066224 [ AGAGGTGCGAATCGACAAGGCGCA NAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGANCAGCCAGGCTACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCTCTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGGTGATATTTTTATTCCTCTAATTAACGACCGACTTGCTGCTGATAATTATTTAATGATCTGTTG ] [+] EMBL AU066313 [ AGAGGTGCGAATCGACAAGGCGCA CAACATCATCATCGGCAGGTAGAGGAGGAAGAGGAGGAGAGCAAGAGCAGCCAGGCTACAACACACTACTACCACCATCACCATGAGCAGACCACAACGACGACACACCACCATTACCATCAGCATGAGCATATGAGCCACTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTCTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTCTCTTAGCTTCTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCTTTTGTCAATTGGGGGTG ] [+] EMBL AU174415 [ ACCATTACCATCAGCATGAGCATATGAGCCNCTACCACATGGGCCCCTCCGACACAGCTGACTCACCCTCGCCGCCGCACTTTGTNTACCATTATGGCGTCGACCCTTGATAATCGCCCAGATAGTNTNTTAGCTTNTGAATCACTAGATTGTTTGTTCTTTTGTTTTTTCCNTTTGTCAATTGGGGGTGATATTTTTATTCCTCTAATTAACGACCGACTGGCTGCTGATAATTATTTAATGATCTGTTGTAAATGCGAATATGTGAGTTGATTGAGTGTGTATATGCACGTAAATCGGAAAAATTCCAATTTGACTCCCTCGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||