cluster # 1113

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1113 cluster # 1113 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1113#0 length = 1368 sequences # 2
consensusID : consensus_1113#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1368
fasta sequence
                              [GCCCGTCTCGCCACCAACAGCTCGCCGCGGCGGCGGCCGAGTCCGGGCAGCGCCACCACCACCAGCAGCAAGCAGCAGCAGCTCGCCGCCCACCCATCCATGGCGAACCCGAGGAGAGCCATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCCGCCGCCCCCGCCGCCGCGCCGTCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAGCGGCCGGCGTCGTTCCCATTCCTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTCCGCTTCCACCACCCGTCCCCTTCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCCCAGGCCAACCTCGTCCGTTACCCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGGCGCGGGTGGCTACTTGACCCCGTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCACTGGTTTGTTTATCACTACACGTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCATCGCCACCATACATGCAATGAGACATTTGTCATCTGGGGTGCAAAGACAAAATTCCGGTTAGAAAATGCTGATGTAAATGATAGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTGGCCATTGTTGCAAGCGCAAGATCAACTGCACATGCCTTGATAAATATGGATGTGCGACCAACCTTCTTCTTGGGATGTCAGGACACGCCAATAAATCCCAACAGCTCGAATACTGACTACAAGGTCTGGAAAGACATCTGATGATCACGTTGCTTCTGTCCTTAATGGTAAGCCATGAGAAACCATAATAGCATGAAGCCTTCAGAAACCATCTTGTTTCCATTGGCAATGATTTCAAAGCAGATGTGTATATAGTTACGGCTTGTGACTTATGAGGGGACTTCCAGTTACGAAGCTATTCTTTTGTTTGTCATGCCAAATTTCTTCTGTAGTAGGTTAACCTTTTTCGTTTGGAGGTGTAATGCATTTTCAGGGTTATTACTTGATGATATGTTCCCCTGTTCTTTGAATGATGTGTTGTCGATAAATTAATTGTTGATATGCAGGTAAGGTGTGACATGAACTTTTTAATGATCACATACCGCAAGATATATCTGATTGCTTAACGTGAATTCTCATATGGTGAGGTAGTGTTTGGCACGCACATCAGCGCATTTCTTGTGGTGTAGCATGGATCACTAGTGTGCTTTCGCGTCTGTCTGACTTGCAGACATCTGCTTTCTTTTGGTTTTCTATCAGCGTCGTCTATATTTGCTAGTTTGATTCATGTCCACAGATTTTTATTTTTAATGACACGTGTGGATGAGTGTGGATATTCGTCCACACAGT]

[+] EMBL AK069286             [GCCCGTCTCGCCACCAACAGCTCGCCGCGGCGGCGGCCGAGTCCGGGCAGCGCCACCACCACCAGCAGCAAGCAGCAGCAGCTCGCCGCCCACCCATCCATGGCGAACCCGAGGAGAGCCATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCCGCCGCCCCCGCCGCCGCGCCGTCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAGCGGCCGGCGTCGTTCCCATTCCTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTCCGCTTCCACCACCCGTCCCCTTCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCCCAGGCCAACCTCGTCCGTTACCCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGGCGCGGGTGGCTACTTGACCCCGTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCACTGGTTTGTTTATCACTACACGTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCATCGCCACCATACATGCAATGAGACATTTGTCATCTGGGGTGCAAAGACAAAATTCCGGTTAGAAAATGCTGATGTAAATGATAGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTGGCCATTGTTGCAAGCGCAAGATCAACTGCACATGCCTTGATAAATATGGATGTGCGACCAACCTTCTTCTTGGGATGTCAGGACACGCCAATAAATCCCAACAGCTCGAATACTGACTACAAGGTCTGGAAAGACATCTGATGATCACGTTGCTTCTGTCCTTAATGGTAAGCCATGAGAAACCATAATAGCATGAAGCCTTCAGAAACCATCTTGTTTCCATTGGCAATGATTTCAAAGCAGATGTGTATATAGTTACGGCTTGTGACTTATGAGGGGACTTCCAGTTACGAAGCTATTCTTTTGTTTGTCATGCCAAATTTCTTCTGTAGTAGGTTAACCTTTTTCGTTTGGAGGTGTAATGCATTTTCAGGGTTATTACTTGATGATATGTTCCCCTGTTCTTTGAATGATGTGTTGTCGATAAATTAATTGTTGATATGCAGGTAAGGTGTGACATGAACTTTTTAATGATCACATACCGCAAGATATATCTGATTGCTTAACGTGAATTCTCATATGGTGAGGTAGTGTTTGGCACGCACATCAGCGCATTTCTTGTGGTGTAGCATGGATCACTAGTGTGCTTTCGCGTCTGTCTGACTTGCAGACATCTGCTTTCTTTTGGTTTTCTATCAGCGTCGTCTATATTTGCTAGTTTGATTCATGTCCACAGATTTTTATTTTTAATGACACGTGTGGATGAGTGTGGATATTCGTCCACACAGT]
[+] EMBL CA754646             [                                                                           CAGCAGCTCGCCGCCCACCCATCCATGGCGAACCCGAGGAGAGCCATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCCGCCGCCCCCGCCGCCGCGCCGTCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAGCGGCCGGCGTCGTTCCCATTCCTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTCCGCTTCCACCACCCGTCCCCTTCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCCCAGGCCAACCTCGTCCGTTACCCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGGCGCGGGTGGCTACTTGACCCCGTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCACTGGTTTGTTTATCACTACACGTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCATCGCCACCATACATGCAATGAGACATTTGTCATCTGGGGTGCANAGACNAAATTCCGGTTAGAANATGCTGATGTAAATGATAGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTGGCCATTGTTGGCAGCGCAAGATCAACTGCACATGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_1113#0
GCCCGTCTCGCCACCAACAGCTCGCCGCGGCGGCGGCCGAGTCCGGGCAGCGCCACCACC
ACCAGCAGCAAGCAGCAGCAGCTCGCCGCCCACCCATCCATGGCGAACCCGAGGAGAGCC
ATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCCGCCGCCCCCGCCGCCGCGCCG
TCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAGCGGCCGGCGTCGTTCCCATTC
CTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTCCGCTTCCACCACCCGTCCCCT
TCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCCCAGGCCAACCTCGTCCGTTAC
CCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGGCGCGGGTGGCTACTTGACCCC
GTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCACTGGTTTGTTTATCACTACAC
GTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCATCGCCACCATACATGCAATGAG
ACATTTGTCATCTGGGGTGCAAAGACAAAATTCCGGTTAGAAAATGCTGATGTAAATGAT
AGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTGGCCATTGTTGCAAGCGCAAGA
TCAACTGCACATGCCTTGATAAATATGGATGTGCGACCAACCTTCTTCTTGGGATGTCAG
GACACGCCAATAAATCCCAACAGCTCGAATACTGACTACAAGGTCTGGAAAGACATCTGA
TGATCACGTTGCTTCTGTCCTTAATGGTAAGCCATGAGAAACCATAATAGCATGAAGCCT
TCAGAAACCATCTTGTTTCCATTGGCAATGATTTCAAAGCAGATGTGTATATAGTTACGG
CTTGTGACTTATGAGGGGACTTCCAGTTACGAAGCTATTCTTTTGTTTGTCATGCCAAAT
TTCTTCTGTAGTAGGTTAACCTTTTTCGTTTGGAGGTGTAATGCATTTTCAGGGTTATTA
CTTGATGATATGTTCCCCTGTTCTTTGAATGATGTGTTGTCGATAAATTAATTGTTGATA
TGCAGGTAAGGTGTGACATGAACTTTTTAATGATCACATACCGCAAGATATATCTGATTG
CTTAACGTGAATTCTCATATGGTGAGGTAGTGTTTGGCACGCACATCAGCGCATTTCTTG
TGGTGTAGCATGGATCACTAGTGTGCTTTCGCGTCTGTCTGACTTGCAGACATCTGCTTT
CTTTTGGTTTTCTATCAGCGTCGTCTATATTTGCTAGTTTGATTCATGTCCACAGATTTT
TATTTTTAATGACACGTGTGGATGAGTGTGGATATTCGTCCACACAGT
clustalw multiple alignements is not computed in this case