These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11135#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2254 fasta sequence [ACCTTCCGACGGCGACCGGGCCGCCATATCCCTCCTACCGTTTGTTCCTCCTCCTCCTCTTCTTCTCCCCCCCTATCTCTCTCTCTCTCTCCCCTCCCTCCCCTCCTCGCTCACCAACTCCTCCTGTCCCGACTCGCGAGCGAATCCGCCGAGCAGCCCAAGAACAAGGGGGAAGGAGGAGGAGGAGGAGGAGGAGGGATGGGGGGGATTGCCTCGTGAAGTGATCCGACATACATATCCCTCCCAGCTTGGGGTTCGAATCCCAATCCCGAGCGGAAAAAAAAGTCTGAAAGTTAACGCGTCCTTCGGCCGCGGATTCAGAATTCTGCGAATATAAGTACATTACGGTGGGCCGTGATACCAATTTGTACCGAGCAATTAATTGAAGGTTAGAGTTTGAGCTTATAGGAGATGAAGTGATTGGAGCTGAATCCTGTTGCTGAAAGCAGCGATTTCGTGTCAAAATTTGATGCCTTTGCTTGGTTCGAGAGCTGTACATGCTTGATACTGTTGCGATCCTGCAATGTCCCGAAGGAATGCCGGGGCAATGCAGCGGGAGGGGTCAGTCAAGGACTGGGAGGAATTTGACCCCTCGCCGTCTCCCAAGCTGGCGTACTCGCAGTCCTATGTTGCAATGAGGGGGCTTCTGACATCGGTGGCCTCGCTGGACCTTGTCCTGATGTCGAGCAGCCTCAAGTCTGCTTGGGCAGCTATATCATCCCACAAGCATGCCCGGTCCTTGGAGAGGTCAAGGTCCAAGGGAATGAGCTTGAAGAGGGCCATGCTGCAGTTATTAGTGTGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTTTTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGATGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGCCGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAA-GGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTACAAAAA] [+] EMBL AK069674 [ACCTTCCGACGGCGACCGGGCCGCCATATCCCTCCTACCGTTTGTTCCTCCTCCTCCTCTTCTTCTCCCCCCCTATCTCTCTCTCTCTCTCCCCTCCCTCCCCTCCTCGCTCACCAACTCCTCCTGTCCCGACTCGCGAGCGAATCCGCCGAGCAGCCCAAGAACAAGGGGGAAGGAGGAGGAGGAGGAGGAGGAGGGATGGGGGGGATTGCCTCGTGAAGTGATCCGACATACATATCCCTCCCAGCTTGGGGTTCGAATCCCAATCCCGAGCGGAAAAAAAAGTCTGAAAGTTAACGCGTCCTTCGGCCGCGGATTCAGAATTCTGCGAATATAAGTACATTACGGTGGGCCGTGATACCAATTTGTACCGAGCAATTAATTGAAGGTTAGAGTTTGAGCTTATAGGAGATGAAGTGATTGGAGCTGAATCCTGTTGCTGAAAGCAGCGATTTCGTGTCAAAATTTGATGCCTTTGCTTGGTTCGAGAGCTGTACATGCTTGATACTGTTGCGATCCTGCAATGTCCCGAAGGAATGCCGGGGCAATGCAGCGGGAGGGGTCAGTCAAGGACTGGGAGGAATTTGACCCCTCGCCGTCTCCCAAGCTGGCGTACTCGCAGTCCTATGTTGCAATGAGGGGGCTTCTGACATCGGTGGCCTCGCTGGACCTTGTCCTGATGTCGAGCAGCCTCAAGTCTGCTTGGGCAGCTATATCATCCCACAAGCATGCCCGGTCCTTGGAGAGGTCAAGGTCCAAGGGAATGAGCTTGAAGAGGGCCATGCTGCAGTTATTAGTGTGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTTTTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGATGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGCCGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAA GGCGTTTTGGTAAATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTGTGCCAATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACATGAACAA ] [+] EMBL CB619643 [ GTTATCCTTGAGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTTTTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGATGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGCCGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGTATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTGTTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAA GGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGG ] [+] EMBL CF305013 [ TCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGGCGTTTTGGTACATGGCCAGTAGCAATAC ] [+] EMBL CA766167 [ ATCGAGAAGCTTGTTGAGGACGAGAGT NAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAGAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTA ] [+] EMBL BM421036 [ TCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCC ATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGA CCAACCAGATACTCTCTTTGATATACATGAAC AAGGTTAAATC AAACCATAGATTGTACAAAAA] consensusID : consensus_11135#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1417 fasta sequence [CAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGTTAAACACGCCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACACAATTATTGAGGTGAGGCAAATGCAACCACTGTGGTACCAGTTAGATCAAGTACATAAGACAAAGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTGTGCCAATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTACACACAATGGTGT] [+] EMBL AK062112 [CAGGTTGAAGAGGGCCCACCAGTTCCTGCAATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGATTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACACCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCTGTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTCTGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGTTGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGTGCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAATAAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCTAGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGGTGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTGGGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAGAGGTGGCTTGCAGTTAAACACGCCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACACAATTATTGAGGTGAGGCAAATGCAACCACTGTGGTACCAGTTAGATCAAGTACATAAGACAAAGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTGTGCCAATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTACACACAATGGTGT] [+] EMBL BE229701 [ CGAG GTCGNATGGAAGG CTTGGGGATAATTGCACTCGTGTGATGGTCTGGAATTTCGAACTGGAA CTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTGTGCCAATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATC TGAGAANCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCNTTGGAACTGTTGAAGANCAAANCANATACTCTCTTTGATATACATGAACAA ] consensusID : consensus_11135#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 779 fasta sequence [TAAGCTCGGTTAACTTATTACACAATTATGNAGGTGAGGCAAATGCAACCATTGTGGTACCAGTTAGATCAAGTACATAAGACAAGGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGTAAGTTTAGATACAACCATGAAATGGAAGCTAATATATAGTAGATAGGAAGTATCTCTTACTAGAAGCAACTCAAGAAGGTAGCAATCATACTGAAACATCTTGGCATTACAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTGTTTGATATACATGAACAAAGGTTAAATCAAAA] [-] EMBL CB619644 [TAAGCTCGGTTAACTTATTACACAATTATGNAGGTGAGGCAAATGCAACCATTGTGGTACCAGTTAGATCAAGTACATAAGACAAGGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGTAAGTTTAGATACAACCATGAAATGGAAGCTAATATATAGTAGATAGGAAGTATCTCTTACTAGAAGCAACTCAAGAAGGTAGCAATCATACTGAAACATCTTGGCATTACAGGAGTCAAGATTTATCGAGAAGCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGTCTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAGGAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCCATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCTCTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGACAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATTCATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATACATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAGCAGATACTCTGTTTGATATACATGAACAAAGGTTAAATCAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11135#0 ACCTTCCGACGGCGACCGGGCCGCCATATCCCTCCTACCGTTTGTTCCTCCTCCTCCTCT 60 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TCTTCTCCCCCCCTATCTCTCTCTCTCTCTCCCCTCCCTCCCCTCCTCGCTCACCAACTC 120 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CTCCTGTCCCGACTCGCGAGCGAATCCGCCGAGCAGCCCAAGAACAAGGGGGAAGGAGGA 180 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 GGAGGAGGAGGAGGAGGGATGGGGGGGATTGCCTCGTGAAGTGATCCGACATACATATCC 240 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CTCCCAGCTTGGGGTTCGAATCCCAATCCCGAGCGGAAAAAAAAGTCTGAAAGTTAACGC 300 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 GTCCTTCGGCCGCGGATTCAGAATTCTGCGAATATAAGTACATTACGGTGGGCCGTGATA 360 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CCAATTTGTACCGAGCAATTAATTGAAGGTTAGAGTTTGAGCTTATAGGAGATGAAGTGA 420 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TTGGAGCTGAATCCTGTTGCTGAAAGCAGCGATTTCGTGTCAAAATTTGATGCCTTTGCT 480 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TGGTTCGAGAGCTGTACATGCTTGATACTGTTGCGATCCTGCAATGTCCCGAAGGAATGC 540 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CGGGGCAATGCAGCGGGAGGGGTCAGTCAAGGACTGGGAGGAATTTGACCCCTCGCCGTC 600 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TCCCAAGCTGGCGTACTCGCAGTCCTATGTTGCAATGAGGGGGCTTCTGACATCGGTGGC 660 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CTCGCTGGACCTTGTCCTGATGTCGAGCAGCCTCAAGTCTGCTTGGGCAGCTATATCATC 720 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CCACAAGCATGCCCGGTCCTTGGAGAGGTCAAGGTCCAAGGGAATGAGCTTGAAGAGGGC 780 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CATGCTGCAGTTATTAGTGTGCTTCATGGTTGGTATCTTCATTGGGTTCACGCCACCCTT 840 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TTCCGTGGATCTACCAGGAAAGATAGCTTCTGAAAATGGGAGGCTTCCATTTGATGGGGA 900 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TGCCATTGACAGAAGACAAATGGTAGAGCGTCAAGGCACCAAGTTGGAGCCATTCGTAGC 960 consensus_11135#1 ------------------------------------------------------------ consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CGAGGCTGAATCTGAAGCAAGCAGCGAGCCACAGGTTGAAGAGGGCCCACCAGTTCCTGC 1020 consensus_11135#1 -------------------------------CAGGTTGAAGAGGGCCCACCAGTTCCTGC 29 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 AATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGA 1080 consensus_11135#1 AATGTTGGATGACGAGGCGGACTTTGTTGAAGCCTCGCCTATCGTACATTCTGTTAATGA 89 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACA 1140 consensus_11135#1 TTCTGGCATTGTTGTGAGGAAGCACCTGATAATTATTACAACAACCTCTGTTCGACCACA 149 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 CCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCT 1200 consensus_11135#1 CCAGGCATATTACTTAAATCGTTTGGCTCATGTATTAAAAGATGTCCCGCCTCCTCTTCT 209 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 GTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTC 1260 consensus_11135#1 GTGGATAGTGGCAGAGTGGCCATATCAGTCCCGCGAAACTGCAGAAATACTGAGGTCTTC 269 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGT 1320 consensus_11135#1 TGGGATCATGTACAGACATCTTATCTGCAATCGGAATACTACAAATATAAGGAAGATTGT 329 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 TGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGT 1380 consensus_11135#1 TGTCTGCCAAAAGAATAATGCAATTTTTCACATTAAGAAGCACCGTCTAGATGGTATAGT 389 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 GCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAAT 1440 consensus_11135#1 GCATTTCGCTGATGAAGAGAGAGCATACTCAGCTGACCTGTTTGAAGAAATGCGGAAAAT 449 consensus_11135#2 -----------------------TAAGCTCGGTTAACTTATT--ACACAATTATGNAGGT 35 * *** * * ** * ** * *** * * * consensus_11135#0 AAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCT 1500 consensus_11135#1 AAGGCGTTTTGGTACATGGCCAGTAGCAATACATGTTGGGACAAAGTACAGAGTGGTTCT 509 consensus_11135#2 GAGGCAAATGCAACCATTGT-GGTACCAGTTAGATCAAGTACATAAGACAAGGTGCTGT- 93 **** * *** * *** ** * * *** * *** *** * consensus_11135#0 AGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGG 1560 consensus_11135#1 AGAAGGCCCCGTTTGTAAGGGTAATCAAGTCACTGGATGGCATACAAATCAGAGAAGGGG 569 consensus_11135#2 -GAAGAACTAGTAACACATGGCAATTCC-TTGTAAGTTTAGATACAACCATGAAATGGAA 151 **** * ** * ** *** * * * ****** ** * ** consensus_11135#0 TGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTG 1620 consensus_11135#1 TGTATCACGTCGATTTCCAATTGGTTTCTCTGGATTTGCTTTTAACAGCACTATACTTTG 629 consensus_11135#2 --------GCTAATATATAGTAGATA-----GGAAGTATCTCT----------TACTAGA 188 * ** * * * * * *** * * * **** consensus_11135#0 GGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAG 1680 consensus_11135#1 GGATCCTCAGAGATGGAACAGCCCCACTTTAGAGTCTATTATAGTCCATTCAGGTGGCAG 689 consensus_11135#2 AGCAACTCAAGAAGGTAGCAATCATACTGAAACATCT-----------------TGGCA- 230 * **** * * * ** * *** * *** ***** consensus_11135#0 AGGTGGCTTGCAG----------------------------------------------- 1693 consensus_11135#1 AGGTGGCTTGCAGTTAAACACGCCCTTTCAAGATCTGGTAAGCTCGGTTAACTTATTACA 749 consensus_11135#2 -------TTACAG----------------------------------------------- 236 ** *** consensus_11135#0 ------------------------------------------------------------ consensus_11135#1 CAATTATTGAGGTGAGGCAAATGCAACCACTGTGGTACCAGTTAGATCAAGTACATAAGA 809 consensus_11135#2 ------------------------------------------------------------ consensus_11135#0 ----------------------------------------GAGTCAAGATTTATCGAGAA 1713 consensus_11135#1 CAAAGTGCTGTGAAGAACTAGTAACACATGGCAATTCCTTGAGTCAAGATTTATCGAGAA 869 consensus_11135#2 ----------------------------------------GAGTCAAGATTTATCGAGAA 256 ******************** consensus_11135#0 GCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGT 1773 consensus_11135#1 GCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGT 929 consensus_11135#2 GCTTGTTGAGGACGAGAGTCAAATGGAAGGCCTTGGGGATAATTGCACTCGTGTTATGGT 316 ************************************************************ consensus_11135#0 CTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAG 1833 consensus_11135#1 CTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAG 989 consensus_11135#2 CTGGAATTTCGAACTGGAACCTCCTCAAGTCAACTACCCAATTGGCTGGCTGCTGCAGAG 376 ************************************************************ consensus_11135#0 GAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCC 1893 consensus_11135#1 GAATCTGGATGCTGTTGTGCCAATAACATAACTGTCCTGCTGCTCCTCTTTTTGTTTGCC 1049 consensus_11135#2 GAATCTGGATGCTGTTATGCCAATAACATAACTGTCCTGCTGCTGCTCTTTTTGTTTGCC 436 **************** *************************** *************** consensus_11135#0 ATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCT 1953 consensus_11135#1 ATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCT 1109 consensus_11135#2 ATCCTAGTGTGAATGATGCCTTCCTGAACTTGGTAGCGTCCAGGATCATGAGAAGCTGCT 496 ************************************************************ consensus_11135#0 CTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGA 2013 consensus_11135#1 CTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGA 1169 consensus_11135#2 CTGCCAAGATCTGGTCCAAATAATGTCATACTAGTAACAGTTGAAAAGTGAGAAGCCTGA 556 ************************************************************ consensus_11135#0 CAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATT 2073 consensus_11135#1 CAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATT 1229 consensus_11135#2 CAAAAGAAAGTTTTTCTCTCTGTTGCATTCTTTTCTATATGTTCATTTTTTCCCCATATT 616 ************************************************************ consensus_11135#0 CATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATA 2133 consensus_11135#1 CATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATA 1289 consensus_11135#2 CATCCAGCTAGATATAGCCATGTACATTTCATTTTTTTTCTCGTTTCTGTCCGTTATATA 676 ************************************************************ consensus_11135#0 CATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAG 2193 consensus_11135#1 CATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAG 1349 consensus_11135#2 CATACATATCACCTCACAGATGTGAATGTTCCCCTCCATTGGAACTGTTGAAGAGCAAAG 736 ************************************************************ consensus_11135#0 CAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTACAAAA 2253 consensus_11135#1 CAGATACTCTCTTTGATATACATGAACAAAGGTTAAATCAAAACCATAGATTGTACACAC 1409 consensus_11135#2 CAGATACTCTGTTTGATATACATGAACAAAGGTTAAATCAAAA----------------- 779 ********** ******************************** consensus_11135#0 A------- 2254 consensus_11135#1 AATGGTGT 1417 consensus_11135#2 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||