These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11147#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2737 fasta sequence [TTTTTTCTAGAAGGTGTAAGACATAAATTATGCCAGCAATAAACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA-ATAACGCGTGGCATTGTACTCTAATT-ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG-CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCCCGGAGCGTCCTCGGCGGCGGGTCCGGCTCGTCGTCCCGCTGGGCCGCGCGCCCGGAGGAGGACGACGAGCCGCCGCCCCTCGACAGCGCGTCGTGGTGCTCCGCCAGCGCGCGGTGCGGGTGCGAGATGAAGCGGTGGCGGAGCTCGATGAGGTCCTGCTGCGGCGTGCCGAACTTGCCCGCCCCGACGGTGCCGCGGAGCACGACGACGGTGAGCAGCAGGCACACTACGGTGAGCTTCGCGTTCCTCGCGAACCGCTGGATCTCCCGCATCCGCCGCTCCCCCACCACCCGCTCCGCCACCCACATTTTGCCCCCCTCCCTCTCCTGCCCCTTCCTCCGATCCCCCCACACCGATCAAACAAACAAATAAACAAACAAACCCTCCTCCCCCAACCCAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGTGGTGGTGGTAAAAGGGGAGGGGAATAGCCAGCCAACGCGTTGCGAGATGCGATGCTTCTACTCCTTTCCCCGCTGTCGCCCGGTAATTTGACTTGATCCTCTCGCGTGGGCGTATGACCGGTGGGGCCACCCGCGTGGGGCCCTACGGGTTTTGTATGGTAATTTTCTCTGGCTTTTTTTTTTGCTCGGTTATAAACGGGGGGTTAATTAACCAGTGGCGGCCAGTTGTAACCAGCCCAGGGGCAAGCGACGTCGCGAGGCGATTGCACATGACGCGGTGACTTTTCTCCAACGTTTAAACACGCGTCCCCATCAACGGCCGTGCCACCACCTCGCTCAAACGAAGCGGGCTGTTCCTCCGCGTCGCTGACGGGTGGGCCATTGCGTCGACACTGACCCACCTGTCAGTGGCGTGGTACTAGTTTCGGCGATGTAGCTGCCGGAGGTGGAGTTGTCGGTTGAGGAGCTAATCACTGGTGTGTGATGGCGATGGCCATAACGATGTTTTTTTTAAAGATTAAAGTGGACATCAGGGTATGTAAGCCAAATTACTCCTCTAGAAGCCCAGTTATTATGCCTTTTCCTTTTGTTTAGTTTGGGTTGGTAAGTAGCGCCAAACAGTAGTAGTTTTATTTTTCAACCATGTAACATCACATTGGACCAGGTTTCTCTCAAATATAATGTACTACGCAT] [-] EMBL BI804641 [TTTTTTCTAGAAGGTGTAAGACATAAATTATGCCAGCAATAAACATACCA TGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCC TTGATG TTGATCCCAACCCAAACTCCC TGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAACATAACGCGTGGCA TGTACTCTAATTCATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGG TGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTGACCAAGCG ] [-] EMBL AK060863 [ TAAACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA ATAACGCGTGGCATTGTACTCTAATT ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCC ] [-] EMBL AK098859 [ AACATACCATTGTTCTCCTAAAATTTCACATTACAACATAGATATCCATCCTTTGATGTTTGATCCCAACCCAAACTCCCTTGTCAACCCAAGTCTACAAAAAGAACACCTTTTTAAGATTTTAGACCCAAAAGGATCTACAATGAACGAA ATAACGCGTGGCATTGTACTCTAATT ATCACTTATCACGTAGAAGTAGTCTTCATGGCCTTGAATGCTGGGTGGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAGGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCT ] [+] EMBL AK109538 [ GGAGCAACCCTAGTTCATCCTTGACATCAAGTGGGTTGCTAGTCTCATTCCTGATCCTCTTCACCTTCCTGCTG CCAAGCGACTTGTGTGTAAACCCATACATTTGCAAGATCTGATTATCCCCAAAATTGAAAGCACGCTCCATCTGCTTGAAGCACCTCTCCACAGGGTAATCCCCAAACTTCCCACACGGCTTGCATCCGACAAAGTGAGTGACCAGTGGCCACCGGTGATCACCAAGTCCTGGATGGTAATTCTCAAGCATTTCCTCATACCTATCAACCAAGATACCCCAATATCCATGGAGGTAATACCCATTCTCAAGGTACACCTTGTCACCCCATTTCTCACGCTCTGTAGCAAGGATGTATACCATGGCCGACTGATCATCAGCCTCAAACACCGGCCGATCCTTCAAGTACTTGGTCAAAACCTTCCCGGCCTCAATACGGACAGGGCCCTTTGGTCCCATTGGTGCCCATGTATCAAGGAAATCAAGCGACCATTGGCAGTTGCGCAGCAAGAAGCTGCCTGTGTTGAGGCCAATCCAGTTCTTGTCGTCGTAGACCATCTCATCCCAGCCGTGCATGATGAGGTTGTAGGGGCCGTACCGCTCCCATGGCAGCTCGAATGCCATGTCGGAGAACATGGCGTCGGAGTCCATCCACCAGAGGAACTCGATCTCCGGGTGCGCGAGGAGCAGCGCGCGGAGGAGCGGGAGCTTGGCCCAGAATCCGGCCATCTCGGCGTCGAGCAGCGCCATGTTGTAGAAGATCTCGAGGCCGTGGACGCGGCAGTAGTCCATCTTGTTCTTGATGGACTTGAGGAGGTAGTGGTCGCCGACGGGGTTCTCGCACGGCTTGGGCGAGGAGCCCGTGACGAGCAGCACCCGCGGCTTGACGTCGTTGACGAAGGGCGGCGTCTCCGGGTGGCGGCGGTGCCACGCGGCCCGCTGCTCGTCCCAGTCGGAGATCTTGGGGCCCAGCGTGTAGGGCGGGTCCCGGAGCGTCCTCGGCGGCGGGTCCGGCTCGTCGTCCCGCTGGGCCGCGCGCCCGGAGGAGGACGACGAGCCGCCGCCCCTCGACAGCGCGTCGTGGTGCTCCGCCAGCGCGCGGTGCGGGTGCGAGATGAAGCGGTGGCGGAGCTCGATGAGGTCCTGCTGCGGCGTGCCGAACTTGCCCGCCCCGACGGTGCCGCGGAGCACGACGACGGTGAGCAGCAGGCACACTACGGTGAGCTTCGCGTTCCTCGCGAACCGCTGGATCTCCCGCATCCGCCGCTCCCCCACCACCCGCTCCGCCACCCACATTTTGCCCCCCTCCCTCTCCTGCCCCTTCCTCCGATCCCCCCACACCGATCAAACAAACAAATAAACAAACAAACCCTCCTCCCCCAACCCAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGTGGTGGTGGTAAAAGGGGAGGGGAATAGCCAGCCAACGCGTTGCGAGATGCGATGCTTCTACTCCTTTCCCCGCTGTCGCCCGGTAATTTGACTTGATCCTCTCGCGTGGGCGTATGACCGGTGGGGCCACCCGCGTGGGGCCCTACGGGTTTTGTATGGTAATTTTCTCTGGCTTTTTTTTTTGCTCGGTTATAAACGGGGGGTTAATTAACCAGTGGCGGCCAGTTGTAACCAGCCCAGGGGCAAGCGACGTCGCGAGGCGATTGCACATGACGCGGTGACTTTTCTCCAACGTTTAAACACGCGTCCCCATCAACGGCCGTGCCACCACCTCGCTCAAACGAAGCGGGCTGTTCCTCCGCGTCGCTGACGGGTGGGCCATTGCGTCGACACTGACCCACCTGTCAGTGGCGTGGTACTAGTTTCGGCGATGTAGCTGCCGGAGGTGGAGTTGTCGGTTGAGGAGCTAATCACTGGTGTGTGATGGCGATGGCCATAACGATGTTTTTTTTAAAGATTAAAGTGGACATCAGGGTATGTAAGCCAAATTACTCCTCTAGAAGCCCAGTTATTATGCCTTTTCCTTTTGTTTAGTTTGGGTTGGTAAGTAGCGCCAAACAGTAGTAGTTTTATTTTTCAACCATGTAACATCACATTGGACCAGGTTTCTCTCAAATATAATGTACTACGCAT] [-] EMBL CB641040 [ CAAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGT ] [-] EMBL CB641039 [ AAAAGCAGCAAATCAAAAATGCAGGCAAGGAATCACCGGTATACCGCGTCTACGGCGACGGCGGCGGCGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAGAAGCCGAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAAGGT ] [-] EMBL CB641267 [ CAAATCAAAAAGGCAGGCAAGGAATCACCGGTATACCGCGTATACGGCGACGGCGCCGGTGTCGGCGGCGCGGAGTGGTGGTGGTGGTGGTGGTGGTGGAGGAAAAAGCCTAGGAGGTTTTGAACCGCGGAGTTGGAGGCGAATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATCTGGGGAGACGCGAAATCGGAATCGAAATCGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGGAGGgt ] [-] EMBL CB641266 [ ATTAATAAGAGAAAGGGCGAGGCGGAGTGGTGCCGCGACCCGCGAGCGAGCGAAGCGCGCACGTTGGCCTCGGAGAGCGGATTGCGGTGGCTGTCTGAGCGATCGGGAGGCGGAATGGAAGGGGAAATATGGGGAGACGCGAAATCGGAATCGGAATGGAATCAACCCCCTGACCCGGCCGCTGCAAGGAGGAGGAAGGAGGAGGAGAAGGAGAAGGCCGAAGGGGAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||