These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11207#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 623 fasta sequence [GAGTCCAGTCCCCACCCGAGCGAGGCGGCGGCGGAACTCCCGGCCTCCGGCGAA-CCC-AGCAGCCGCCACCTCTCGCGGCTCCAATCA-CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGCGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCT-CCGAGTTCCGCCGCCCCACTGGCACGGACGCCGACGCCAGAGCGCGGCTGCGGCTCGCCGGGGATTACACCTACCTCCT-CGCCAGCGTCCACCACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCA-GGCGTGA-GGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACTGCCTTTTAGCGACGATTTTCTTCCAGAAGCTTTACTTGCAACCAGTAATTTGCTTTCAAATTCCAGATTTCAGTTAGTCTGGAAAGTTTAGCTTGTAAGCTGTAAGCAGCTGTATTTTTTTTACCAAATAATGAGCAATGGAATCATTATTTAACGATTTACGTTAAAAAAA] [+] EMBL C29076 [GAGTCCAGTCCCCACCCGAGCGAGGCGGCGGCGGAACTCCCGGCCTCCGGCGAA CCC AGCAGCCGCCACCTCTCGCGGCTCCAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGNGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCT CCNAGTTCCGCCGNCCCACTGGCACGGACGNCGACGCCAGANCGCGGCTGCGGCTCGCCGGGGATTACAac ] [+] EMBL OSS11050A [ AGTCCAGTCCCCACCCGAGCGAGGCNGCGGCGGAACTCCCGGCCTCCGGCGAA CCC AGCAGCCGCCACNTNTCGCGGCTCCAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGNGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGNNT CCNAGTTCCGCCGNCCCACTGGCACGGACGC ] [+] EMBL AU071005 [ ACCCGAGCGANGCGGCGGCGGAACNCCCGGCCTCCGGCGAA CCC AGCAGCCGCCACCNCTCGCGGCTCCAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGCGGGGGCGACNCCAAGAAGCACTTCCGCGAGTTCGTCGCCN CCGAGTTCCGCCGCCCCACNGGCACGGACACCGACNCCAGAGCGCGGCTGCGGCTCGCCGGGGATTACACCNACCTCCT CGCCAGCGTCCACCACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCAGGGCGTGA GGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACNGCCTTTTAGCGACGATTTTCTTCCAGAAGCTTTACTTGCAACCAGTAATTTGCTTTCAAATTCCAGATTTCAGTTAGTCTGGAAAGTTTAGCTTGTAAGCTGTAAGCAGCTGTATTTTTTTTACCAAATAATGAGCAATGGAATCATNATTTAACGATTTACGTTAAAAAAA] [+] EMBL AU071225 [ ACCCGAGCGAGGCGGCGGCGGAACTCCCGGCCTCCGGCGAA CCC AGCAGCCGCCACCTCTCGCGGCTCCAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGCGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCT CCGAGTTCCGCCGCCCCACTGGCACGGACGCCGACGCCAGAGCGCGGCTGCGGCTCGCCGGGGATTACACCNACCTCCT CGCCAGCGTCCACNACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCA GGCGTGA GGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACTGC ] [+] EMBL CF325591 [ GGAACTCCCGGCCTCCGGCGAA CCC AGCAGCCGCCACCTCTCGCGGCTCCAATCA CACAGACCAGATGATGGCC ] [+] EMBL AU095628 [ cgnCTCCGGCGAA CCCNAGCAGCCGCAACNTNTCGCGGCTCCAATCACCACAGACCAGATGATGCCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGCCGGTGCAGAAGCACGTCGGCGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCTCCCGAGTTCCGCCGCCCCACTGGCACGGACGCCGACGCCAGAGCGCGGCTGCGGCTCGCCGGGGATTACACCTACCTCCTCCGCCAGCGTCCACCACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCA GGCGTGA GGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACTGCCTTTTAGCGACGATTTTCTTCCAGAAGCTTTACTTGCAACCAGTAATTTGCTTTCAAATTCCAGATTTCAGTTAGTCTGGAAAGTTTAGCTTGTAAGCTGTAAGCAGCTGTATTTTTTTTACCAAATAATGAGCAATGGAATCATTATTTAACGATTTACGTTAAAAAAA] [+] EMBL C27517 [ TCCGGCGAA CNC AGCAGCCGCCACCTCTCGCGGCTCCAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGCGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCT CCGAGTTCCGCCGCCCCACTGGCACGGACGCCGACGCCAGAGCGCGGCTGCGGCTCGCNGGGGATTACACCTACCTCCT CGCCAGCNTCCACCACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCA GGCGTNAGGGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACTGCCT ] [+] EMBL AU160872 [ nTCCGGCGAACCCC AGCAGCCGCCACCTCTCGCGGCTCAAATCA CACAGACCAGATGATGGCCGCGGCGGCCGTCTACCGGCGGGTGCTCAAGGCGGTGCAGAAGCACGTCGGCGGGGGCGACTCCAAGAAGCACTTCCGCGAGTTCGTCGCCT CCGAGTTCCGCCGCCCCACTGGCACGGACGCCGACGCCAGAGCGCGGCTGCGGCTCGCCGGGGATTACACCTACCTCCT CGCCAGCGTCCACCACCACAAGGACCTGCTATTCTCGTATAATATAGCTGTGGACCGATCAGAGGAGATGAAGAAGATATTGAACAAATCTGCTGCTAGTGTAGGCCTTCAGCTTCCAGATGTCTATCA GGCGTGA GGAACTTCATTTTTGCAGAAATGTGCAATCTTTGGTACTGCCTTTTAGCGACGATTTTCTTCCAGAAGCTTTACTTGCAACCAGTAATTTGCTTTCAAATTCCAGATTTCAGTTAGTCTGGAAAGTTTAGCTTGTAAGCTGTAAGCAGCTGTATTTTTTTTACCAAATAATGAGCAATGGAATCATTATTTAACGATTTACGTTAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||