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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2243 fasta sequence
[CTCCCCCTCTGCTGCTGCTGCTGCTGCTGCCGCCTCGACTCCTCCTCCTAGATCTGGAAGCTCACTCCCCCCCCCACCCCCACCCACCTCCTCGCCGCCGATCTCCACCGCATTCCCCTCCTCCTCGTCGCCGGCGACCTCCCCCCGCCCCCCTGATCTCCGTCGTCCAGCGGCATCGTCGTCGGTGAGCGAAGGTGCTGATACAAGGTGTTGTCTGAGTCTGCAAATATTGATGATGTGCCTAAAAGTTTGACAGTCTTGCTTGAATACACAGCAGCATTACTTGGTTACACTCTGAAGGTGTAGTTGCCTTTGTTGGTTTAGAACATGGGTTCACGGTTTCCATCCCACCAACTAAGCAATGGCCTTTATGTCTCGGGCCGACCAGAGCAACCTAAGGAGAAGGCTCCAGTCATTTGCTCCACAGCAATGCCATACACTGGGGGTGACATAAAGAAATCTGGAGAACTAGGGAAAATGTTTGACCTCCATGTTGAAAAGTCGCGGAAGTCTGGTCCTTTGGGTAATCAACCTTCAAGAAATACTTCATTTGGTGGTGCTGGTTCCAACTCTGGACCAGTTTCTAATGCTCTTGGTCGGTCCAACTACTCTGGTTCTATTTCATCATCTGTTCCTGGTGCTGGAGGATCAGCAAGGGCAAAATCAAATTCTGGACCTCTCAATAAGCATGGAGAACCAGGAAAGAAGTCATCTGGTCCCCAGTCAGGCGGAGTGACCCCAATGGCACGTCAGAATTCTGGTCCTTTACCTCCTGTTCTTCCTACAACTGGGCTGATCACATCAGGGCCTATCTCCTCTGGACCTCTGAATTCATCTGGTGCTCCACGAAAAGTATCAGGCCCTCTTGATCCTAGTGTATCAATGAAGATGCGTGCAACTTCTTTTGCTCACAACCCAGCTGTTACAAACCTGAATGCCGATGATGGTTACTCTATTAAGGGCAGCATTCCTAAGACAATACTCTGGATGGTTATTCTGCTCTTTTTGATGGGGTTCATAGCAGGTGGTTTCATTCTTGGAGCTGTTCATAACCCTATTCTGCTGGTAGTTGTGGTGGTCATATTTTGCTTTGTTGCTGCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACAGGGGCTGGGATTCGAAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCACGGGTAACCCCTTATGTTGATGAATCTGTTGTTATTGACATAAACCCAGATAACAAGGACATGTCTCCCGAGTTCTTGAGATGGCTGCGTGAAAGGAATCTATCAAGTGATGATCGGATAATGCGCCTGAAAGAAGGATACATTAAGGAGGGCAGCACGGTGAGTGTTATGGGGGTTGTTCAAAGGAACGACAACGTGTTGATGATTGTTCCTCCATCGGAACCCATCTCCACTGGCTGCCAGTGGGCCAAGTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACATCGATGTAATACCAGTCTGAGCTTAGCTTTGTTCTGGCAGCTACTCCTAGAAAGAAAATGCCTGTCAAAATCTTTGGATTTATTTCGTGGGATGTTAGAGTTGAAAGATGTGCAAATGCAGGGTGTGATTATGGCTAAGTACAATATCGGTGGTCTATTATTTGGGTCTTGGTTGTATAGTATTTTATGTATTTTTTCTCTCTTCTTTTTTCTTTCTTTTGGTGATCTATGGATACTTGTAACATGGATGGCTTGAGTTGTACCTTGGAGCTGTTTGGAGATTCAGTGGAATCGAGTTCACAAGGTTTTTTGNTGAAGAATTCCAGCAGTATCATAAGTCGGTCCAGTTTCAATTTATGCACCTTTACTCTAAAACTTACTGGNCTCTTGGTAGGTATATTTTCATGGACATAATGNATAAATTTCGTTTGTAATTAATTCCGGTCTCTGTAAGATATGAATCAATTTATTTGGAGGAATTCCTAAA]
[+] EMBL AK069639 [CTCCCCCTCTGCTGCTGCTGCTGCTGCTGCCGCCTCGACTCCTCCTCCTAGATCTGGAAGCTCACTCCCCCCCCCACCCCCACCCACCTCCTCGCCGCCGATCTCCACCGCATTCCCCTCCTCCTCGTCGCCGGCGACCTCCCCCCGCCCCCCTGATCTCCGTCGTCCAGCGGCATCGTCGTCGGTGAGCGAAGGTGCTGATACAAGGTGTTGTCTGAGTCTGCAAATATTGATGATGTGCCTAAAAGTTTGACAGTCTTGCTTGAATACACAGCAGCATTACTTGGTTACACTCTGAAGGTGTAGTTGCCTTTGTTGGTTTAGAACATGGGTTCACGGTTTCCATCCCACCAACTAAGCAATGGCCTTTATGTCTCGGGCCGACCAGAGCAACCTAAGGAGAAGGCTCCAGTCATTTGCTCCACAGCAATGCCATACACTGGGGGTGACATAAAGAAATCTGGAGAACTAGGGAAAATGTTTGACCTCCATGTTGAAAAGTCGCGGAAGTCTGGTCCTTTGGGTAATCAACCTTCAAGAAATACTTCATTTGGTGGTGCTGGTTCCAACTCTGGACCAGTTTCTAATGCTCTTGGTCGGTCCAACTACTCTGGTTCTATTTCATCATCTGTTCCTGGTGCTGGAGGATCAGCAAGGGCAAAATCAAATTCTGGACCTCTCAATAAGCATGGAGAACCAGGAAAGAAGTCATCTGGTCCCCAGTCAGGCGGAGTGACCCCAATGGCACGTCAGAATTCTGGTCCTTTACCTCCTGTTCTTCCTACAACTGGGCTGATCACATCAGGGCCTATCTCCTCTGGACCTCTGAATTCATCTGGTGCTCCACGAAAAGTATCAGGCCCTCTTGATCCTAGTGTATCAATGAAGATGCGTGCAACTTCTTTTGCTCACAACCCAGCTGTTACAAACCTGAATGCCGATGATGGTTACTCTATTAAGGGCAGCATTCCTAAGACAATACTCTGGATGGTTATTCTGCTCTTTTTGATGGGGTTCATAGCAGGTGGTTTCATTCTTGGAGCTGTTCATAACCCTATTCTGCTGGTAGTTGTGGTGGTCATATTTTGCTTTGTTGCTGCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACAGGGGCTGGGATTCGAAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCACGGGTAACCCCTTATGTTGATGAATCTGTTGTTATTGACATAAACCCAGATAACAAGGACATGTCTCCCGAGTTCTTGAGATGGCTGCGTGAAAGGAATCTATCAAGTGATGATCGGATAATGCGCCTGAAAGAAGGATACATTAAGGAGGGCAGCACGGTGAGTGTTATGGGGGTTGTTCAAAGGAACGACAACGTGTTGATGATTGTTCCTCCATCGGAACCCATCTCCACTGGCTGCCAGTGGGCCAAGTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACATCGATGTAATACCAGTCTGAGCTTAGCTTTGTTCTGGCAGCTACTCCTAGAAAGAAAATGCCTGTCAAAATCTTTGGATTTATTTCGTGGGATGTTAGAGTTGAAAGATGTGCAAATGCAGGGTGTGATTATGGCTAAGTACAATATCGGTGGTCTATTATTTGGGTCTTGGTTGTATAGTATTTTATGTATTTTTTCTCTCTTCTTTTTTCTTTCTTTTGGTGATCTATGGATACTTGTAACATGGATGGCTTGAGTTGTACCTTGGAGCTGTTTGGAGATTCAGTGGAATCGAGTTCACAAGG ]
[+] EMBL AK060252 [ AAGGTGTAGTTGCCTTTGTTGGTTTAGAACATGGGTTCACGGTTTCCATCCCACCAACTAAGCAATGGCCTTTATGTCTCGGGCCGACCAGAGCAACCTAAGGAGAAGGCTCCAGTCATTTGCTCCACAGCAATGCCATACACTGGGGGTGACATAAAGAAATCTGGAGAACTAGGGAAAATGTTTGACCTCCATGTTGAAAAGTCGCGGAAGTCTGGTCCTTTGGGTAATCAACCTTCAAGAAATACTTCATTTGGTGGTGCTGGTTCCAACTCTGGACCAGTTTCTAATGCTCTTGGTCGGTCCAACTACTCTGGTTCTATTTCATCATCTGTTCCTGGTGCTGGAGGATCAGCAAGGGCAAAATCAAATTCTGGACCTCTCAATAAGCATGGAGAACCAGGAAAGAAGTCATCTGGTCCCCAGTCAGGCGGAGTGACCCCAATGGCACGTCAGAATTCTGGTCCTTTACCTCCTGTTCTTCCTACAACTGGGCTGATCACATCAGGGCCTATCTCCTCTGGACCTCTGAATTCATCTGGTGCTCCACGAAAAGTATCAGGCCCTCTTGATCCTAGTGTATCAATGAAGATGCGTGCAACTTCTTTTGCTCACAACCCAGCTGTTACAAACCTGAATGCCGATGATGGTTACTCTATTAAGGGCAGCATTCCTAAGACAATACTCTGGATGGTTATTCTGCTCTTTTTGATGGGGTTCATAGCAGGTGGTTTCATTCTTGGAGCTGTTCATAACCCTATTCTGCTGGTAGTTGTGGTGGTCATATTTTGCTTTGTTGCTGCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAAATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACAGGGGCTGGGATTCGGAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGGTTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCACGGGTAACCCCTTATGTTGATGAATCTGTTGTTATTGACATAAACCCAGATAACAAGGACATGTCTCCCGAGTTCTTGAGATGGCTGCGTGAAAGGAATCTATCAAGTGATGATCGGATAATGCGCCTGAAAGAAGGATACATTAAGGAGGGCAGCACGGTGAGTGTTATGGGGGTTGTTCAAAGGAACGACAACGTGTTGATGATTGTTCCTCCATCGGAACCCATCTCCACTGGCTGCCAGTGGGCCAAGTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACATCGATGTAATACCAGTCTGAGCTTAGCTTTGTTCTGGCAGCTACTCCTAGAAAGAAAATGCCTGTCAAAATCTTTGGATTTATTTCGTGGGATGTTAGAGTTGAAAGATGTGCAAATGCAGGGTGTGATTATGGCTAAGTACAATATCGGTGGTCTATTATTTGGGTCTTGGTTGTATAGTATTTTATGTATTTTTTCTCTCTTCTTTTTTCTTTCTTTTGGTGATCTATGGATACTTGTAACATGGATGGCTTGAGTTGTACCTTGGAGCTGTTTGGAGATTCAGTGGAATCGAGTTCACAAGGTTT ]
[+] EMBL CA767288 [ tnAAGGAACGACAACGTGTTGATGATTGTTCCTCCATCGGAACCCATCTCCACTGGCTGCCAGTGGGCCAAGTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACATCGATGTAATACCAGTCTGAGCTTAGCTTTGNTCTGGCAGCTACTCCTAGAAAGAAAATGCCTGTCAAAATCTTTGGATTTATTTCGTGGGATGTTAGAGTTGAAAGATGNGCAAATGCAGGGTGTGATTATGGTTAAGCACAATATCGGTGGTCTATTATTTGGGCCTTGGTTGNATAGTATTTTATGNATTTTT TCTCTTCTTTTTTCTTTCTTTTGGTGATCTATGGATACTTGTAACATGGATGGCTTGAGNTGTACCTTGGAGCTGTTTGGAGATTCAGTGGAATCGAGTTCACAAGGNTTTTTGNTGAAGAATTCCAGCAGTATCATAAGTCGGTCCAGTTTCAATTTATGCACCTTTACTCTAAAACTTACTGGNCTCTTGGTAGGTATATTTTCATGGACATAATGNATAAA ]
[+] EMBL CB000568 [ GGCCAAGTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACATCGATGTAATACCAGTCTGAGCTTAGCTTTGTTCTGGCAGCTACTCCTAGAAAGAAAATGCCTGTCAAAATCTTTGGATTTATTTCGTGGGATGTTAGAGTTGAAAGATGTGCAAATGCAGGGTGTGATTATGGCTAAGTACAATATCGGTGGTCTATTATTTGGGTCTTGGTTGTATAGTATTTGATGTATTTTTTCTCTCTTCTTTTTTCTTTCTTTTGGTGATCTATGGATACTTGTAACATGGATGGCTTGAGTTGTACCTTGGAGCTGTTTGGAGATTCAGTGGAATCGAGTTCACAAGGTTTTTTGGTGAAGAATTCCAGCAGGATCATAAGTCGTTCCAGTTTCAATTTATGCACCTTTACTCTAAAACTTCCTGGTCTCTTGGTAGGTATATTTTCATGGACATAATGTATAAATTTCGTTTGTAATTAATTCCGGTCTCTGTAAGATATGAATCAATTTATTTGGAGGAATTCCTAAA]
consensusID : consensus_11243#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2209 fasta sequence
[CTACTCCCCCCCCCCCCCTCCCCCCTCCCCTTCTTCCTCTCTGTCTCCAGCGCACGCACGCACGACCACCTCGCCTCCTCTCCTCTCCCCTCCCCTCCCCCACCTCGCCTCGCCTCCACGCGCGCGACGCGGCCGGCGACGGCGAGCCGCACGGCGCGTGGGCGTGCCTCTCCTCAGCCGGCGGCTAGCCCTCTCCTCGCGCGGGGGCGGCGGCGGCGGCGGTTGTTGCTGGCCTCATTCCACCGCCATCCCTCCTCCGTGTCTCGGGCTCGACTCGGTGGTGAAGGTCAGGTGCTGATGCAAGATATAGGTTGTTCTATGAGAAGGATAGCTGTGCACATCAAGACCCAAATATAATCTCACTTGGTTGTACTATAGTGGTGGTTGAACACTAAGATATAGCTTATTCTGTTGTTTCAAAAACATGGGTTCGAGGTTTCCATCGCATCAGCTTAGCAATGGCCTGTATGTGTCTGGCCGACCTGAGCAACCGAAGGAGAAGGCCCCAACCATTTGTTCCACTGCCATGCCATACACTGGTGGTGATATAAAAAAATCTGGAGAGCTTGGGAAGATGTTTGAGCTCCACGCTGTCAAGTCAAGAAAATCTGGTCCACTGAGCAATGCACCTTCGAGGAATGCGTCATTTGGAGGTGCTGCATCAAACTCTGGACCTGTCCCTAATGCCGGGGATCGGTCCAACTACTCTGGTTCTCTATCATCTTCAGTTCCTGGTGCTAGTGGATCAGCAAGAGCAAAATCTAGCTCCGGACCTCTCAATAAGCATGGAGAACCAGTAAAGAGATCATCAGGTCCTCAGTCTGGAGGAGTGACCCCAATGGCGCGGCAGAATTCTGGCCCTCTCCCTCCTATGCTTCCTACAACTGGACTTATCACATCTGGGCCTATCACATCGGGGCCACTGAATTCGTCTGGTGCTCAAAGGAAAGTATCTGGACCTCTTGATTCTGCTGCATCCAAGAAGACGCGGGCCACATCCTTTTCTCATAACCAGGCTGTTACTAAAATCACCACAGAAGACAGTTACTCAATCACAGGAAGCCTTTCGAAGCTAATACTCGGGGCAGTGGGTGTGCTCTTTGTGTTGGGGCTCATAGCAGGCATCTTGATTCTTAGTGCTGTTCACAATGCAATTCTTCTGATAGTTGTTCTGGTGCTGTTTGGTTTTGTTGCTGCACTTTTCATTTGGAATGCTTGCTGGGCAAGGAGAGGTGTGATTGGGTTTGTGGATCGCTATTCTGATGCTGATCTAAGAACTGCTAAAGATGGACAGTATATCAAGGTTACAGGGGTTGTTACTTGTGGAAATTTCCCTCTCGAGTCCTCGTATCAAAGGGTTCCAAGATGTGTGTACACTTCAACTACCTTACATGAATATAGGGGTTGGGACTCAAAAGCTGCCAACACCCAGCATCACCGGTTTACCTGGGGATTACGGTCAATGGAGCAACACGCAGTGGATTTCTACATCTCAGATTTTCAATCTGGGCTCCGGGCATTGGTGAAAGCAGGATATGGTGCTCGAGTGACCCCATTCGTGGATGAATCTGTCATTATTGACATTGATCCTGACAACAAAGACATGTCCCCTGAATTTCGAAGATGGCTGCGGGAAAGGAATCTCTCAAGTGATGATCGGATAATGCGCCTAAAAGAAGGATACATTAAGGAAGGCAGCACCGTGAGTGTGATGGGGGTTGTTCAAAAGAATGACAACGTGTTGATGATTGTTCCTCCACCAGAGCCCATCTCTACTGGTTGCCAGTGGGCCAAGTGTGTCCTCCCAAGGGACCTTTATGGATTAGTCCTGAGATGTGAAGATACCTCAAATATCGATGTCATAGCGGTTTAGCAAGCTGGGTGTTGGAACTTAGAAGAGCTGCTGCTGAAGAAGTGCTTTTTAAATGTTTTGACTTGGAGTTTGTTTCGTGGAATGTTAGAATTGAGAAAAATGTACAAATGTTGGGGATGATTAAGGTTAGTAAAAATAGATGTTAAGCTGGGGTTTGGATGTATAGTCTTTTCTTGTATTTTGTCCTTTCTTTTCACCTATTCCTCGGTTATGAGCACTGAATGCTTGTCTTGTGAAATATGATGGCTTGGTTATTACTACCATCCAGCTGTTTGAAGACTTAGTGAAATTGGGTAAACAACTATATATGTTTTTTTCAACTAGATGTATCACTGC]
[+] EMBL AK068251 [CTACTCCCCCCCCCCCCCTCCCCCCTCCCCTTCTTCCTCTCTGTCTCCAGCGCACGCACGCACGACCACCTCGCCTCCTCTCCTCTCCCCTCCCCTCCCCCACCTCGCCTCGCCTCCACGCGCGCGACGCGGCCGGCGACGGCGAGCCGCACGGCGCGTGGGCGTGCCTCTCCTCAGCCGGCGGCTAGCCCTCTCCTCGCGCGGGGGCGGCGGCGGCGGCGGTTGTTGCTGGCCTCATTCCACCGCCATCCCTCCTCCGTGTCTCGGGCTCGACTCGGTGGTGAAGGTCAGGTGCTGATGCAAGATATAGGTTGTTCTATGAGAAGGATAGCTGTGCACATCAAGACCCAAATATAATCTCACTTGGTTGTACTATAGTGGTGGTTGAACACTAAGATATAGCTTATTCTGTTGTTTCAAAAACATGGGTTCGAGGTTTCCATCGCATCAGCTTAGCAATGGCCTGTATGTGTCTGGCCGACCTGAGCAACCGAAGGAGAAGGCCCCAACCATTTGTTCCACTGCCATGCCATACACTGGTGGTGATATAAAAAAATCTGGAGAGCTTGGGAAGATGTTTGAGCTCCACGCTGTCAAGTCAAGAAAATCTGGTCCACTGAGCAATGCACCTTCGAGGAATGCGTCATTTGGAGGTGCTGCATCAAACTCTGGACCTGTCCCTAATGCCGGGGATCGGTCCAACTACTCTGGTTCTCTATCATCTTCAGTTCCTGGTGCTAGTGGATCAGCAAGAGCAAAATCTAGCTCCGGACCTCTCAATAAGCATGGAGAACCAGTAAAGAGATCATCAGGTCCTCAGTCTGGAGGAGTGACCCCAATGGCGCGGCAGAATTCTGGCCCTCTCCCTCCTATGCTTCCTACAACTGGACTTATCACATCTGGGCCTATCACATCGGGGCCACTGAATTCGTCTGGTGCTCAAAGGAAAGTATCTGGACCTCTTGATTCTGCTGCATCCAAGAAGACGCGGGCCACATCCTTTTCTCATAACCAGGCTGTTACTAAAATCACCACAGAAGACAGTTACTCAATCACAGGAAGCCTTTCGAAGCTAATACTCGGGGCAGTGGGTGTGCTCTTTGTGTTGGGGCTCATAGCAGGCATCTTGATTCTTAGTGCTGTTCACAATGCAATTCTTCTGATAGTTGTTCTGGTGCTGTTTGGTTTTGTTGCTGCACTTTTCATTTGGAATGCTTGCTGGGCAAGGAGAGGTGTGATTGGGTTTGTGGATCGCTATTCTGATGCTGATCTAAGAACTGCTAAAGATGGACAGTATATCAAGGTTACAGGGGTTGTTACTTGTGGAAATTTCCCTCTCGAGTCCTCGTATCAAAGGGTTCCAAGATGTGTGTACACTTCAACTACCTTACATGAATATAGGGGTTGGGACTCAAAAGCTGCCAACACCCAGCATCACCGGTTTACCTGGGGATTACGGTCAATGGAGCAACACGCAGTGGATTTCTACATCTCAGATTTTCAATCTGGGCTCCGGGCATTGGTGAAAGCAGGATATGGTGCTCGAGTGACCCCATTCGTGGATGAATCTGTCATTATTGACATTGATCCTGACAACAAAGACATGTCCCCTGAATTTCGAAGATGGCTGCGGGAAAGGAATCTCTCAAGTGATGATCGGATAATGCGCCTAAAAGAAGGATACATTAAGGAAGGCAGCACCGTGAGTGTGATGGGGGTTGTTCAAAAGAATGACAACGTGTTGATGATTGTTCCTCCACCAGAGCCCATCTCTACTGGTTGCCAGTGGGCCAAGTGTGTCCTCCCAAGGGACCTTTATGGATTAGTCCTGAGATGTGAAGATACCTCAAATATCGATGTCATAGCGGTTTAGCAAGCTGGGTGTTGGAACTTAGAAGAGCTGCTGCTGAAGAAGTGCTTTTTAAATGTTTTGACTTGGAGTTTGTTTCGTGGAATGTTAGAATTGAGAAAAATGTACAAATGTTGGGGATGATTAAGGTTAGTAAAAATAGATGTTAAGCTGGGGTTTGGATGTATAGTCTTTTCTTGTATTTTGTCCTTTCTTTTCACCTATTCCTCGGTTATGAGCACTGAATGCTTGTCTTGTGAAATATGATGGCTTGGTTATTACTACCATCCAGCTGTTTGAAGACTTAGTGAAATTGGGTAAACAACTATATATGTTTTTTTCAACTAGATGTATCACTGC]
[+] EMBL CB641032 [ ACCACCTCGCCTCCTCTCCTCTCCCCTCCCCTCCCCCACCTCGCCTCGCCTCCACGCGCGCGACGCGGCCGGCGACGGCGAGCCGCACGGCGCGTGGGCGTGCCTCTCCTCAGCCGGCGGCTAGCCCTCTCCTCGCGCGGGGGCGGCGGCGGCGGCGGTTGTTGCTGGCCTCATTCCACCGCCATCCCTCCTCCGTGTCTCGGGCTCGACTCGGCGGCGAAGGTCAGGTGCTGATGCAAGATATAGGTTGTTCTATGAGAAGGATAGCTGTGCACATCAAGACCCAAATAT ]
consensusID : consensus_11243#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 522 fasta sequence
[GCCGCTAGCGGCCGCGAATTCGCGGCCGCTGTCATATTTTGCTTTGTTGCTGCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACATGGGGCTGGGATTCGAAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCAC-GGGTAACCCCTTATGTTGATGAATCTGTTGTTATTGACATAAACCNAGATAACAAGGCATGTCTCCCGAGTTCTTGAGATTGCTGCGTTAAAGGAATCTATCAAGTGATGTNCGGATAAGC]
[+] EMBL AU225344 [GCCGCTAGCGGCCGCGAATTCGCGGCCGCTGTCATATTTTGCTTTGTTGCTGCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACATGGGGCTGGGATTCGAAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCAC GGGTAACCCCTTATGTTGATGAATCTGTTGTT ]
[+] EMBL OSS4804A [ TGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGCTATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTTGTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTACACTTCAACTTGCTTGTATGAGTACA GGGGCTGGGATTCGAAAGCTGCTAACACTGAGCACCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTCTGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGNACGGGGTAACCCCTTATGTTGATG ATCTGTTGTTATTGACATAAACCNAGATAACAAGGCATGTCTCCCGAGTTCTTGAGATTGCTGCGTTAAAGGAATCTATCAAGTGATGTNCGGATAAGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11243#0 ------------------------------------------------------------
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CTACTCCCCCCCCCCCCCTCCCCCCTCCCCTTCTTCCTCTCTGTCTCCAGCGCACGCACG 60
consensus_11243#0 --------------------CTCCCCCTCTGCTGCTGCTGCTGCTGCTGCCGCCTCGACT 40
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CACGACCACCTCGCCTCCTCTCCTCTCCCCTCCCCTCCCCCACCTCGCCTCGCCTCCACG 120
consensus_11243#0 CCTCCTCCTAGATCTGGAAGCTCACTCCCCCCCCCACCCCCACCCACCTCCTCGCCGCCG 100
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CGCGCGACGCGGCCGGCGACGGCGAGCCGCACGGCGCGTGGGCGTGCCTCTCCTCAGCCG 180
consensus_11243#0 ATCTCCACCGCATTCCCCTCCT-----CCTCGTCGCCGGCGAC-----CTCCCCCCGCCC 150
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GCGGCTAGCCCTCTCCTCGCGCGGGGGCGGCGGCGGCGGCGGTTGTTGCTGGCCTCATTC 240
consensus_11243#0 CCCTGATCTCCGTCGTCCAG----CGGCATCG--TCGTCGGTGAGCGA-AGGTGCTGATA 203
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CACCGCCATCCCTCCTCCGTGTCTCGGGCTCGACTCGGTGGTGAAGGTCAGGTGCTGATG 300
consensus_11243#0 CAAGGTGTTGTCTGAG-TCTGCAAATATTGATGATGTGCCTAAAAGTTTGA---CAGTCT 259
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CAAGATATAGGTTGTTCTATGAGAAGGATAGCTGTGCACATCAAGACCCAAATATAATCT 360
consensus_11243#0 TGCTTGAATACACAGCAGCATTACTTGGTTACACTCTGAAGGTGTAGTTGCCTTTGTTGG 319
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CACTTGGTTGTACTATAGTGGTGGTTGA--ACACT---AAGATATAGCTTATTCTGTTGT 415
consensus_11243#0 TTTAGAA-CATGGGTTCACGGTTTCCATCCCACCAACTAAGCAATGGCCTTTATGTCTCG 378
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 TTCAAAAACATGGGTTCGAGGTTTCCATCGCATCAGCTTAGCAATGGCCTGTATGTGTCT 475
consensus_11243#0 GGCCGACCAGAGCAACCTAAGGAGAAGGCTCCAGTCATTTGCTCCACAGCAATGCCATAC 438
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GGCCGACCTGAGCAACCGAAGGAGAAGGCCCCAACCATTTGTTCCACTGCCATGCCATAC 535
consensus_11243#0 ACTGGGGGTGACATAAAGAAATCTGGAGAACTAGGGAAAATGTTTGACCTCCATGTTGAA 498
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 ACTGGTGGTGATATAAAAAAATCTGGAGAGCTTGGGAAGATGTTTGAGCTCCACGCTGTC 595
consensus_11243#0 AAGTCGCGGAAGTCTGGTCCTTTGGGTAATCAACCTTCAAGAAATACTTCATTTGGTGGT 558
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 AAGTCAAGAAAATCTGGTCCACTGAGCAATGCACCTTCGAGGAATGCGTCATTTGGAGGT 655
consensus_11243#0 GCTGGTTCCAACTCTGGACCAGTTTCTAATGCTCTTGGTCGGTCCAACTACTCTGGTTCT 618
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GCTGCATCAAACTCTGGACCTGTCCCTAATGCCGGGGATCGGTCCAACTACTCTGGTTCT 715
consensus_11243#0 ATTTCATCATCTGTTCCTGGTGCTGGAGGATCAGCAAGGGCAAAATCAAATTCTGGACCT 678
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CTATCATCTTCAGTTCCTGGTGCTAGTGGATCAGCAAGAGCAAAATCTAGCTCCGGACCT 775
consensus_11243#0 CTCAATAAGCATGGAGAACCAGGAAAGAAGTCATCTGGTCCCCAGTCAGGCGGAGTGACC 738
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CTCAATAAGCATGGAGAACCAGTAAAGAGATCATCAGGTCCTCAGTCTGGAGGAGTGACC 835
consensus_11243#0 CCAATGGCACGTCAGAATTCTGGTCCTTTACCTCCTGTTCTTCCTACAACTGGGCTGATC 798
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CCAATGGCGCGGCAGAATTCTGGCCCTCTCCCTCCTATGCTTCCTACAACTGGACTTATC 895
consensus_11243#0 ACATCAGGGCCTATCTCCTCTGGACCTCTGAATTCATCTGGTGCTCCACGAAAAGTATCA 858
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 ACATCTGGGCCTATCACATCGGGGCCACTGAATTCGTCTGGTGCTCAAAGGAAAGTATCT 955
consensus_11243#0 GGCCCTCTTGATCCTAGTGTATCAATGAAGATGCGTGCAACTTCTTTTGCTCACAACCCA 918
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GGACCTCTTGATTCTGCTGCATCCAAGAAGACGCGGGCCACATCCTTTTCTCATAACCAG 1015
consensus_11243#0 GCTGTTACAAACCTGAATGCCGATGATGGTTACTCTATTAAGGGCAGCATTCCTAAGACA 978
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GCTGTTACTAAAATCACCACAGAAGACAGTTACTCAATCACAGGAAGCCTTTCGAAGCTA 1075
consensus_11243#0 ATACTCTGGATGGTTATTCTGCTCTTTTTGATGGGGTTCATAGCAGGTGGTTTCATTCTT 1038
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 ATACTCGGGGCAGTGGGTGTGCTCTTTGTGTTGGGGCTCATAGCAGGCATCTTGATTCTT 1135
consensus_11243#0 GGAGCTGTTCATAACCCTATTCTGCTGGTAGTTGTGGTGGTCATATTTTGCTTTGTTGCT 1098
consensus_11243#2 ---GCCGCTAGCGGCCGCGAATTCGCGGCCGCTGT------CATATTTTGCTTTGTTGCT 51
consensus_11243#1 AGTGCTGTTCACAATGCAATTCTTCTGATAGTTGTTCTGGTGCTGTTTGGTTTTGTTGCT 1195
** * * * * * *** * *** * *********
consensus_11243#0 GCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGC 1158
consensus_11243#2 GCTCTTGTGATTTGGAACATTTGCTGGGGAACAAGAGGTGTGACTGGGTTCGTCAGTCGC 111
consensus_11243#1 GCACTTTTCATTTGGAATGCTTGCTGGGCAAGGAGAGGTGTGATTGGGTTTGTGGATCGC 1255
** *** * ******** ******** ** ********** ****** ** ****
consensus_11243#0 TATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTT 1218
consensus_11243#2 TATCCTGATGCTGATCTCAGAACAGCAAAAGATGGACAGTATGTGAAAGTTACTGGGGTT 171
consensus_11243#1 TATTCTGATGCTGATCTAAGAACTGCTAAAGATGGACAGTATATCAAGGTTACAGGGGTT 1315
*** ************* ***** ** *************** * ** ***** ******
consensus_11243#0 GTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTAC 1278
consensus_11243#2 GTTACATGTGGAAATTTTCCTCTCGAGTCCTCATTTCAAAGGGTCCCAAGATGTGTGTAC 231
consensus_11243#1 GTTACTTGTGGAAATTTCCCTCTCGAGTCCTCGTATCAAAGGGTTCCAAGATGTGTGTAC 1375
***** *********** ************** * ********* ***************
consensus_11243#0 ACTTCAACTTGCTTGTATGAGTACA-GGGGCTGGGATTCGAAAGCTGCTAACACTGAGCA 1337
consensus_11243#2 ACTTCAACTTGCTTGTATGAGTACATGGGGCTGGGATTCGAAAGCTGCTAACACTGAGCA 291
consensus_11243#1 ACTTCAACTACCTTACATGAATATA-GGGGTTGGGACTCAAAAGCTGCCAACACCCAGCA 1434
********* *** **** ** * **** ***** ** ******** ***** ****
consensus_11243#0 CCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTC 1397
consensus_11243#2 CCGCCAATTTACTTGGGGTCTTAGGTCAATGGAGAGACATGCTGTTGATTTCTACATCTC 351
consensus_11243#1 TCACCGGTTTACCTGGGGATTACGGTCAATGGAGCAACACGCAGTGGATTTCTACATCTC 1494
* ** ***** ***** * *********** *** ** ** **************
consensus_11243#0 TGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCACGGGTAACCCC 1457
consensus_11243#2 TGATTTCCAATCTGGACTACGAGCATTGGTCAAAACAGGATATGGAGCACGGGTAACCCC 411
consensus_11243#1 AGATTTTCAATCTGGGCTCCGGGCATTGGTGAAAGCAGGATATGGTGCTCGAGTGACCCC 1554
***** ******** ** ** ******** *** ********** ** ** ** *****
consensus_11243#0 TTATGTTGATGAATCTGTTGTTATTGACATAAACCCAGATAACAAGGACATGTCTCCCGA 1517
consensus_11243#2 TTATGTTGATGAATCTGTTGTTATTGACATAAACCNAGATAACAAGG-CATGTCTCCCGA 470
consensus_11243#1 ATTCGTGGATGAATCTGTCATTATTGACATTGATCCTGACAACAAAGACATGTCCCCTGA 1614
* ** *********** ********** * * ** ***** * ****** ** **
consensus_11243#0 GTTCTTGAGATGGCTGCGTGAAAGGAATCTATCAAGTGATGATCGGATAATGCGCCTGAA 1577
consensus_11243#2 GTTCTTGAGATTGCTGCGTTAAAGGAATCTATCAAGTGATGTNCGGATAA-GC------- 522
consensus_11243#1 ATTTCGAAGATGGCTGCGGGAAAGGAATCTCTCAAGTGATGATCGGATAATGCGCCTAAA 1674
** **** ****** ********** ********** ******* **
consensus_11243#0 AGAAGGATACATTAAGGAGGGCAGCACGGTGAGTGTTATGGGGGTTGTTCAAAGGAACGA 1637
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 AGAAGGATACATTAAGGAAGGCAGCACCGTGAGTGTGATGGGGGTTGTTCAAAAGAATGA 1734
consensus_11243#0 CAACGTGTTGATGATTGTTCCTCCATCGGAACCCATCTCCACTGGCTGCCAGTGGGCCAA 1697
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CAACGTGTTGATGATTGTTCCTCCACCAGAGCCCATCTCTACTGGTTGCCAGTGGGCCAA 1794
consensus_11243#0 GTGCATCCTCCCTACTAGCCTTGATGGGCTAGTCTTAAGATGCGAAGATACATCGAACAT 1757
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GTGTGTCCTCCCAAGGGACCTTTATGGATTAGTCCTGAGATGTGAAGATACCTCAAATAT 1854
consensus_11243#0 CGATGTAATACCAGTCTG---AGCTTAGCTTTGTT-CTGGCAGCTACTCCTAGAAAGAAA 1813
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CGATGTCATAGCGGTTTAGCAAGCTGGGTGTTGGAACTTAGAAGAGCTGCTGCTGAAGAA 1914
consensus_11243#0 ATGCCTGTCAAAATCTTTGG------ATTTATTTCGTGGGATGTTAGAGTTGA--AAGAT 1865
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GTGCTTTTTAAATGTTTTGACTTGGAGTTTGTTTCGTGGAATGTTAGAATTGAGAAAAAT 1974
consensus_11243#0 GTGCAAATGCAGGGTGTGATTATGGCTAAGTACAATATCGGTGGTCTATTATTTGGGTCT 1925
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 GTACAAATGTTGGGGATGATTAAGGTTAGTAAAAATAGATGT------TAAGCTGGGGTT 2028
consensus_11243#0 TGGTTGTATAGTATTTTAT-GTATTTTTTCTCTCTTCTTTTTTCTTTCTTTTG--GTGAT 1982
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 TGGATGTATAGTCTTTTCTTGTATTTTGTCCTTTCTTTTCACCTATTCCTCGGTTATGAG 2088
consensus_11243#0 CTATGGATACTTGTAACATG------GATGGCTTG---AGTTGTACCTTGGAGCTGTTTG 2033
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 CACTGAATGCTTGTCTTGTGAAATATGATGGCTTGGTTATTACTACCATCCAGCTGTTTG 2148
consensus_11243#0 GAGATTCAGTGGAATCGAGTTCACAAGGTTTTTTGNTGAAGAATTCCAGCAGTATCATAA 2093
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 AAGACTTAGTGAAATTGGGTAAACAACTATATATGTTTTTTTCAACTAGATGTATCACTG 2208
consensus_11243#0 GTCGGTCCAGTTTCAATTTATGCACCTTTACTCTAAAACTTACTGGNCTCTTGGTAGGTA 2153
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 C----------------------------------------------------------- 2209
consensus_11243#0 TATTTTCATGGACATAATGNATAAATTTCGTTTGTAATTAATTCCGGTCTCTGTAAGATA 2213
consensus_11243#2 ------------------------------------------------------------
consensus_11243#1 ------------------------------------------------------------
consensus_11243#0 TGAATCAATTTATTTGGAGGAATTCCTAAA 2243
consensus_11243#2 ------------------------------
consensus_11243#1 ------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||