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Oryza sativa
cluster # 11287 cluster # 11287       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11287#0 length = 1535 sequences # 6  
consensus_11287#1 length = 476 sequences # 1  
consensus_11287#2 length = 359 sequences # 1  

consensusID : consensus_11287#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1535
fasta sequence
                              [CGTCCCCGCCGTCCACGCCGGCGCCGCGCTGAGCCGCCGACGTCGGAGCGACTGCGACTCCTCCTGTCGCCGCCCGCCTTCTCCAGTTCTCCCCTCTGCCCGTCTCCGTTTGGCCGCCGCCCGCCTTCTCCTGCTCTTGGCTGCTCCACGCCTCCACCGATCCGGCGCTCCACCCTTCAGCCCAGAGGATTGGTAAATTGTTACTGATTAGTGATATTGCGTCGTTATTTCAGAACCATGCGGCCGCTTGTGGATGCTGACTACCCAAGGAAAAATTCCTAGCTACGCCACTACCCACCATCGCGGCCGCTGCTTTCCCCTCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTCCGCGCAGGGCTTCTCCACGGGTCCGTGGCGACGGCGGCGGTGGTTCGGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGAGGTGGCGATGGCGGATAAGGAGGGGGTAGGGGTGGAGCGGCTAGTGGAGGTGGCGCAGAGGGCGGCAGACGCCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCATCGACAAGGAGGATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGGTGTCAGTCATTCTGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGAGATGCGTGGAAAAGTCTGCTGATTATGTTTGGGTTTTGGACCCCATAGATGGAACAAAAAGCTTCATAACTGGCAAGCCTCTGTTTGGTACGCTTATTTCACTCTTGTACAAGGGGAAGCCGGTTATTGGCATCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGATGAAAACAACCTTAAATGGACAAGAAATATCTGTTCGCCCTTGCAATGTCCTGGCACAAGCTTACTTATATACAACAAGTCCACATTT-GTTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAATTTGATGGTTATTCGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071379             [CGTCCCCGCCGTCCACGCCGGCGCCGCGCTGAGCCGCCGACGTCGGAGCGACTGCGACTCCTCCTGTCGCCGCCCGCCTTCTCCAGTTCTCCCCTCTGCCCGTCTCCGTTTGGCCGCCGCCCGCCTTCTCCTGCTCTTGGCTGCTCCACGCCTCCACCGATCCGGCGCTCCACCCTTCAGCCCAGAGGATTGGTAAATTGTTACTGATTAGTGATATTGCGTCGTTATTTCAGAACCATGCGGCCGCTTGTGGATGCTGACTACCCAAGGAAAAATTCCTAGCTACGCCACTACCCACCATCGCGGCCGCTGCTTTCCCCTCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTCCGCGCAGGGCTTCTCCACGGGTCCGTGGCGACGGCGGCGGTGGTTCGGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGAGGTGGCGATGGTGGATAAGGAGGGGGTAGGGGTGGAGCGGCTAGTGGAGGTGGCGCAGAGGGCGGCAGACGCCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCATCGACAAGGAGGATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGGTGTCAGTCATTCTGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGAGATGCGTGGAAAAGTCTGCTGATTATGTTTGGGTTTTGGACCCCATAGATGGAACAAAAAGCTTCATAACTGGCAAGCCTCTGTTTGGTACGCTTATTTCACTCTTGTACAAGGGGAAGCCGGTTATTGGCATCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGATGAAAACAACCTTAAATGGACAAGAAATATCTGTTCGCCCTTGCAATGTCCTGGCACAAGCTTACTTATATACAACAAGTCCACATTT GTTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAA                                             ]
[+] EMBL AK103440             [      CGCCGTCCACGCCGGCGCCGCGCTGAGCCGCCGACGTCGGGGCGACTGCGACTCCTCCTGTCGCCGCCAGCCTTCTCCAGTTCTCCCCTCTGCCCGTCTCCGTTTGGCCGCCGCCCGCCTTCTCCTGCTCTTGGCTGCTCCACGCCTCCACCGATCCGGCGCTCCACCCTTCAGCCCAGAGGATTGGTAAATTGTTACTGATTAGTGATATTGCGTCGTTATTTCAGAACCATGCGGCCGCTTGTGGATGCTGACTACCCAAGGAAAAATTCCTAGCTACGCCACTACCCACCATCGCGGCCGCTGCTTTCCCCTCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTCCGCGCAGGGCTTCTCCACGGGTCCGTGGCGACGGCGGCGGTGGTTCGGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGAGGTGGCGATGGCGGATAAGGAGGGGGTAGGGGTGGAGCGGCTAGTGGAGGTGGCGCAGAGGGCGGCAGACGCCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCATCGACAAGGAGGATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGGTGTCAGTCATTCTGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGAGATGCGTGGAAAAGTCTGCTGATTATGTTTGGGTTTTGGACCCCATAGATGGAACAAAAAGCTTCATAACTGGCAAGCCTCTGTTTGGTACGCTTATTTCACTCTTGTACAAGGGGAAGCCGGTTATTGGCATCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGATGAAAACAACCTTAAATGGACAAGAAATATCTGTTCGCCCTTGCAATATCCTGGCACAAGCTTACTTATATACAACAAGTCCACATTT GTTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAA                                             ]
[+] EMBL AU093884             [                                                                                                                                                                                                                                                                                                                               CTCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTCCGCGCAGGGCTTCTCCACGGGTCCGTGGCGACGGNGGCGGTGGTTCGGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGAGGTGGCGATGGCGGATAAGGAGGGGGTAGGGGTGGAGCGGCTANTGGAGGTGGCGCAGAGGGCGGCAGACGCCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCATCGACAAGGAGGATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGGTGTCAGTCATTCTGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGAGATGCGTGGAAAAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL C27658               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCACTNTTGTACAAGGGGAAGCCNNTTATTGGCATCATTGANCANCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGCTTATNACAACCTTAAATGGACAAGNNATATCTNTTCGCCCTNGCAATGTCCTGGCACAAGCTTACTTATATACAACAAGTCCACATTTCATTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGNTTACTATGCCTATGCTCTTCTTGCCTCTGGTTTTNTAGATCTTGTCNTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTNAAGGAGCTCGAGGATCAATAACAGATTNGAAAGGctcaa                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU092593             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CACTCTTGTACAAGGGGAAGCCGGTTATTGGCATCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGATGAAAACAACCTTAAATGGACAAGAAATATCTGTTCGCCCTTGCAATGTCCTGGCACAAGCTTACTTATATACAACAAGTCCACATTT GTTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAATTTGATGGTTATTCGGCTAAAAA                      ]
[+] EMBL C98661               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAATTTGATGGTTATTCGGCTGAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11287#0 CGTCCCCGCCGTCCACGCCGGCGCCGCGCTGAGCCGCCGACGTCGGAGCGACTGCGACTC CTCCTGTCGCCGCCCGCCTTCTCCAGTTCTCCCCTCTGCCCGTCTCCGTTTGGCCGCCGC CCGCCTTCTCCTGCTCTTGGCTGCTCCACGCCTCCACCGATCCGGCGCTCCACCCTTCAG CCCAGAGGATTGGTAAATTGTTACTGATTAGTGATATTGCGTCGTTATTTCAGAACCATG CGGCCGCTTGTGGATGCTGACTACCCAAGGAAAAATTCCTAGCTACGCCACTACCCACCA TCGCGGCCGCTGCTTTCCCCTCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCAC CCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTCCGCGCAGGGCTTC TCCACGGGTCCGTGGCGACGGCGGCGGTGGTTCGGGCGTGCGGGGTGACGACGGGCCACC GTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGAGGTGGCGATGG CGGATAAGGAGGGGGTAGGGGTGGAGCGGCTAGTGGAGGTGGCGCAGAGGGCGGCAGACG CCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCATCGACAAGGAGG ATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGGTGTCAGTCATTC TGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGAGATGCGTGGAAA AGTCTGCTGATTATGTTTGGGTTTTGGACCCCATAGATGGAACAAAAAGCTTCATAACTG GCAAGCCTCTGTTTGGTACGCTTATTTCACTCTTGTACAAGGGGAAGCCGGTTATTGGCA TCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGATGAAAACAACCT TAAATGGACAAGAAATATCTGTTCGCCCTTGCAATGTCCTGGCACAAGCTTACTTATATA CAACAAGTCCACATTTGTTTGCAGGAGAAGCTGAAGATGCATTTATTCGTGTACGGGATA AGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTCTTGCCTCTGGTT TTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCTCATTGGTACCAG TCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGCTCCATTGGCCTG TCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAGACGCCCGTGTCC ACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACATCCAAGTTTGGT CTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTATTTTGTATGCTT GCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATCAATTTGATGGTT ATTCGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11287#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 476
fasta sequence
                              [TCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTTCGCGCATGGCTTCTCCACGGGTCCGTGGCGACGGCAGCAGTGGTTCTGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGATCCCCACGGCAGGCGGATGGGAGGTGGCAATGGCGGATAAGGAGGGGGTAGGGGTGGAGCTGCTGTGCTGGCTGTGAAACATGGAGCAGGGTGAGGATGGGGACGTCATGGACAGGGCCCTTGACGTTCCTTATGATAAAACGGCTCTGAGGATCAGAAGAACTGTACTATGACCTGTGTCAACTGACCCCAGGAGCCGGTGCGGCCCATCACCTTCACCACAACTGCAAGTTTGACCTGTGTATACATGCTTGTCTTATACGGCTGCTAACGACTGCTGACGGTGAAG]

[+] EMBL BI305675             [TCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCGCGCCGCCACCTTCGCGCATGGCTTCTCCACGGGTCCGTGGCGACGGCAGCAGTGGTTCTGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGATCCCCACGGCAGGCGGATGGGAGGTGGCAATGGCGGATAAGGAGGGGGTAGGGGTGGAGCTGCTGTGCTGGCTGTGAAACATGGAGCAGGGTGAGGATGGGGACGTCATGGACAGGGCCCTTGACGTTCCTTATGATAAAACGGCTCTGAGGATCAGAAGAACTGTACTATGACCTGTGTCAACTGACCCCAGGAGCCGGTGCGGCCCATCACCTTCACCACAACTGCAAGTTTGACCTGTGTATACATGCTTGTCTTATACGGCTGCTAACGACTGCTGACGGTGAAG]


>consensus_11287#1 TCCCTGCCCCAAATGCTCCCGGCCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCAC TCCCGCGCTGCCCCGCGCCGCCACCTTCGCGCATGGCTTCTCCACGGGTCCGTGGCGACG GCAGCAGTGGTTCTGGCGTGCGGGGTGACGACGGGCCACCGTCGGAGGATGGGCTCGGTT CGGGCGATCCCCACGGCAGGCGGATGGGAGGTGGCAATGGCGGATAAGGAGGGGGTAGGG GTGGAGCTGCTGTGCTGGCTGTGAAACATGGAGCAGGGTGAGGATGGGGACGTCATGGAC AGGGCCCTTGACGTTCCTTATGATAAAACGGCTCTGAGGATCAGAAGAACTGTACTATGA CCTGTGTCAACTGACCCCAGGAGCCGGTGCGGCCCATCACCTTCACCACAACTGCAAGTT TGACCTGTGTATACATGCTTGTCTTATACGGCTGCTAACGACTGCTGACGGTGAAG



consensusID : consensus_11287#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 359
fasta sequence
                              [GGGAATATGCTTGCGGCTGCTGCTTTCCCCTCCCTGGTCGCCAAATGCTCCCGGCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCTGCTGCCTGCCACCTCCTGCGCATGTGGCTTCTCCACTGTGTGTCCTGTGTGCTGACCGGCTGTGCGTGTGTGTTCTGTGTGCTGTGCTGTGTGTGTGACCGACCGGGCCACCTGTCTGGACGTGACTGGGCTCGTGTTCTGTGGCGACGCCCCACGTGGACACTGTGCTGTGACTGGGACGTGTTGTGCTGACTTGTGCGTGACTACACTGACGGGGGTACTGTGTGTTGTGACGCTGTGCTACGTTGGACTG]

[+] EMBL BU673825             [GGGAATATGCTTGCGGCTGCTGCTTTCCCCTCCCTGGTCGCCAAATGCTCCCGGCACCTCCACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCTGCTGCCTGCCACCTCCTGCGCATGTGGCTTCTCCACTGTGTGTCCTGTGTGCTGACCGGCTGTGCGTGTGTGTTCTGTGTGCTGTGCTGTGTGTGTGACCGACCGGGCCACCTGTCTGGACGTGACTGGGCTCGTGTTCTGTGGCGACGCCCCACGTGGACACTGTGCTGTGACTGGGACGTGTTGTGCTGACTTGTGCGTGACTACACTGACGGGGGTACTGTGTGTTGTGACGCTGTGCTACGTTGGACTG]


>consensus_11287#2 GGGAATATGCTTGCGGCTGCTGCTTTCCCCTCCCTGGTCGCCAAATGCTCCCGGCACCTC CACCGTCCCACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCTGCTGCCTGCCACCT CCTGCGCATGTGGCTTCTCCACTGTGTGTCCTGTGTGCTGACCGGCTGTGCGTGTGTGTT CTGTGTGCTGTGCTGTGTGTGTGACCGACCGGGCCACCTGTCTGGACGTGACTGGGCTCG TGTTCTGTGGCGACGCCCCACGTGGACACTGTGCTGTGACTGGGACGTGTTGTGCTGACT TGTGCGTGACTACACTGACGGGGGTACTGTGTGTTGTGACGCTGTGCTACGTTGGACTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11287#0      CGTCCCCGCCGTCCACGCCGGCGCCGCGCTGAGCCGCCGACGTCGGAGCGACTGCGACTC 60
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CTCCTGTCGCCGCCCGCCTTCTCCAGTTCTCCCCTCTGCCCGTCTCCGTTTGGCCGCCGC 120
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CCGCCTTCTCCTGCTCTTGGCTGCTCCACGCCTCCACCGATCCGGCGCTCCACCCTTCAG 180
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CCCAGAGGATTGGTAAATTGTTACTGATTAGTGATATTGCGTCGTTATTTCAGAACCATG 240
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CGGCCGCTTGTGGATGCTGACTACCCAAGGAAAAATTCCTAGCTACGCCACTACCCACCA 300
consensus_11287#2      ----------------------------------------------GGGAATATGC---- 10
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TCGCGGCCGCTGCTTTCCCCTCCCTG--CCCCAAATGCTCCCGGCCACCTCCACCGTCCC 358
consensus_11287#2      TTGCGGCTGCTGCTTTCCCCTCCCTGGTCGCCAAATGCTCCCGGC-ACCTCCACCGTCCC 69
consensus_11287#1      --------------------TCCCTG--CCCCAAATGCTCCCGGCCACCTCCACCGTCCC 38
                                           ******  * *************** **************

consensus_11287#0      ACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCG------CGCCGCCACCTCCGCGC 412
consensus_11287#2      ACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCTGCTGCCTGCCACCTCCTGCGCAT 129
consensus_11287#1      ACCCACCTCGCCCCTTCCCCACTCCCGCGCTGCCCCG------CGCCGCCACCTTCGCGC 92
                       ************************************        *** ** *** ***  

consensus_11287#0      AGGGCTTCTCCACGG---GTCCGTGGCGACGGCGGCGGTGGTTCGGGCGTGCGGGGTGAC 469
consensus_11287#2      GTGGCTTCTCCACTGTGTGTCCTGTGTGCTGAC--CGGCTGTGCGTGTGTGTTCTGTG-T 186
consensus_11287#1      ATGGCTTCTCCACGG---GTCCGTGGCGACGGCAGCAGTGGTTCTGGCGTGCGGGGTGAC 149
                         *********** *   ****   * *  * *  * *  ** *  * ***    ***  

consensus_11287#0      GACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGAGCCCCAGGGCAGGCGGATGGGA 529
consensus_11287#2      GCTGTGCTGT-GTGTGTGACCGACCGGGCCACCTGTCTGGACGTGACTGGGCTCGTGTTC 245
consensus_11287#1      GACGGGCCACCGTCGGAGGATGGGCTCGGTTCGGGCGATCCCCACGGCAGGCGGATGGGA 209
                       *  * **    **  * *   *  *  *   *  *      *       ***   **   

consensus_11287#0      GGTGGCGATGGCGGATAAGGAGGGGGTAGGGGTGGAGCGGCTAGTGGAGGTGGCGCAGAG 589
consensus_11287#2      TGTGGCGACGCCCCACGTGGACACTGTGCTGTGACTGGGACGTGTTGTGCTGAC-TTGTG 304
consensus_11287#1      GGTGGCAATGGCGGATAAGGAGGGGGTAGGGGTGGAGCTGC-TGTGCTGGCTGTGAAACA 268
                        ***** * * *  *   ***    **   *     *   *  **   *           

consensus_11287#0      GGCGGCAGACGCCGCAGGGGAGGTGCTCAGGAAGTACTTCCGGCAACGCGTCGAGATCAT 649
consensus_11287#2      CGTGACT-ACACTG--ACGGGGGTACTGTGTGTTGTGACGCTGTGCTACGTTGGACTG-- 359
consensus_11287#1      TGGAGCA-GGGTGAGGATGGGGACGTCATGGACAGGGCCCTTGACGTTCCTTATGATAAA 327
                        *   *            ** *       *            *     * *     *   

consensus_11287#0      -CGACAAGGAGGATCAGAGTCCTGTAACTATTGCAGATAGAGAAGCGGAAGAAGCAATGG 708
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ACGGCTCTGAGGATCAGAAGAACTGTACTATGACCTGT-GTCAACTGACCCCAGGAGCCG 386
                                                                                   

consensus_11287#0      TGTCAGTCATTCTGAAGAGCTTCCCTTCCCATGCCGTTTTTGGTGAGGAAAATGGTTGGA 768
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      GTGCGGCCCATCACCTTCACCACAACTGCAAGTTTGACCTGTGTATACATGCTTGTCTTA 446
                                                                                   

consensus_11287#0      GATGCGTGGAAAAGTCTGCTGATTATGTTTGGGTTTTGGACCCCATAGATGGAACAAAAA 828
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      TACGGCTGCTAACGACTGCTGACGGTGAAG------------------------------ 476
                                                                                   

consensus_11287#0      GCTTCATAACTGGCAAGCCTCTGTTTGGTACGCTTATTTCACTCTTGTACAAGGGGAAGC 888
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CGGTTATTGGCATCATTGATCAGCCAATCTTGAGAGAAAGATGGGTTGGGGTTGATGGGA 948
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TGAAAACAACCTTAAATGGACAAGAAATATCTGTTCGCCCTTGCAATGTCCTGGCACAAG 1008
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CTTACTTATATACAACAAGTCCACATTTGTTTGCAGGAGAAGCTGAAGATGCATTTATTC 1068
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      GTGTACGGGATAAGGTCAAAGTCCCACTGTATGGTTGCGATTGCTATGCCTATGCTCTTC 1128
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TTGCCTCTGGTTTTGTAGATCTTGTTGTTGAATCAGGATTGAAGCCATATGATTTTCTCT 1188
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      CATTGGTACCAGTCATTGAAGGAGCTGGAGGTTCAATAACAGATTGGAAAGGAAACAAGC 1248
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TCCATTGGCCTGTCTCTGCGGAATCACGGCCTGAAAGTTTCAATGTGGTGGCATCTGGAG 1308
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      ACGCCCGTGTCCACAAGCAGGCCCTTGATGCGTTGCAATGGCACTAGTCTGCAAAACACA 1368
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TCCAAGTTTGGTCTCTAAACAAACATGAATGTGTTATTCATGTGTCCAATAAACAGTGTA 1428
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      TTTTGTATGCTTGCGCCGTGAGCGACTAGTTATTCAAATTGCACTGCCACTAATAAAATC 1488
consensus_11287#2      ------------------------------------------------------------
consensus_11287#1      ------------------------------------------------------------
                                                                                   

consensus_11287#0      AATTTGATGGTTATTCGGCTAAAAAAAAAAAAAAAAAAAAAAAAAAA 1535
consensus_11287#2      -----------------------------------------------
consensus_11287#1      -----------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)