These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11292#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1941 fasta sequence [GTTTTTCTTCTGCCTCAGCGAGATCCCGTCGCGCCCCCCCCCGCCATTCCAAGTCCGGCCGGTCTGAGGCCGAGGAGACGGCGACAGCGGAGGCCCGGAGGCGGGAAGCTGACCGGCGAGAAGCCGCGGACCGCCTCCGGGAAGCCGAGGAGGCTGCCCAGGAGGCCGTCCGGGTTCGCCAGGCTGAGAAGGCCGCTCGGGAGGAGGCCAGACTCCGCCGGGCCGGGGAGTCCGTCCGGGAGGCAGAGGCGGCGCGCGCACGCCAGGCGGCCTGCCAAACCCCCGACCCGACTCCGCCCGAGGGGACGACAACTTCCGAGGCCACCCACGACGAGGCCGCGGGCGTGCCGCTCGGGCCCGACCCCTCGGGCGACACTTGGGACGAGCCAGCTTCGAGGGACGCCCCCGAGTCCGGCACGTCTTCCGCTGCCCCACTGAGCGTGGAGCCCTTCCTACAGGCCTTGGCCGCCGCGAACAGCACGGTGCTGGACGGGTTAAGTGCCCAGATGGAGGCCCTGCAGGCGGAGCGGGCGGAGCTCGACACGGCGTGGGCGCGCGTCGAGGAGGGGCGGCGCTCGGTGGAGGCCATGGTGGAGGCTGGCCGCAAGGCGCACCACCGGCACACCTCACAGCTCGAGGCCCGTCGTAGGGAGCTGGTGGAGATCGCTAGGGAGGTGGAGGAGGAGCGGGAGACTGCCCTCATCGCCACCGCCGTGCTCGACGAGGCGCGGGACGACCTCCGCCTCCAATACGGGAGCCGGGCGGCGGAGCTAGAGGAGAAGCTCGACGCCGCCCGGGGAGTCCTTGATGCCGCCGCTGCACGGGAACGGCGGGCGGCGGAGAAAGAGGCGGCGTCCCGCCAGCGCGAAGAGGCCCTTGAGGTTCGCGCCACGGCGCTGGAGGAGCGTGCCCGCGCCCTGGACGTGAAGGAGAGAGACCTGGCGGACCGCGAGGCCGCCGTCGCCACCCGGGAGGCAACACTGGCGTCGCACGAGGCCGCCTGCGCCGAAGAGGAGTCCGCACTCCGCCTCCACGAGGACGCGCTCACCGAACGGGAGCGAGCTCTCGAGGAGGCCGAGGCCGCGGCGCAGCGGCTGGCGGACAGCCTGTTCCTCCGCGAGGCAGCGCGGGAGGAGCAGGCACGCCGCAAACTGGAAGGCGCCCGCGCCGAGAGGGCCGCACTGGATCAGCGGGCCGCTGAGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGAGCGCACAGCGGCGGGGCGGCCGCGGGCCACGGCGACCTAGCCGCCCGCCTCGCAGCCGCCGAACACACCATCGCCAAGCTGCAGGGCGCGCTGGACTCGTCCGCCGGGGAGGTCGAGGCCCTCCGCTTGGCGAGTGAGGTAGGGCCCGGCATGCTTCGGGACGCCGTCTCCCGTCTAGACCGCGCCGGGCGGCAGGCGGGTCTCTGGGGCGGGCGGCACGCGAAGTACGCCGCCAACCAGGGGGGCCTCGCCCAGTGCCTCTCAGAGATGGCCGGGGCCCTCCAGCGGCTCCCCGAGGAGCTCGAGGAGACGATCAAGTCATCCTCGAGGGACCTCGCCCGGGGGGCGGTGGAGCTCGTACTGGCAAGCTACCAGGCCAGGGACCCTGACTTCTCCCCGTGGGCAGCGCTGGAAGAGTTCCCTCCCGGAACCGAGGATGGCGCGCGCGCGCGGGTCCGGGACGCCGCCGACTACATCGTCCACAGCTTCGAGGGTACGGCCCCTCGGCTCGCGTTCGCGCTCGACTCCGACGAGGAGGGCGGTGACGACGGTGCGGACGACAGCGGCGACGAGGCCGACGGCCCGGGGGCGCCGGAGTGAGCCCCCAGGCCCCCGCCAATCTTAATAACTTCTCCTTCTTCTTCCGAGGCCTTCGGGCCCCCTTCTTGTATAGACTGATTTAATCTGTAATCAAATAAAGAGGAAA] [+] EMBL AK110862 [GTTTTTCTTCTGCCTCAGCGAGATCCCGTCGCGCCCCCCCCCGCCATTCCAAGTCCGGCCGGTCTGAGGCCGAGGAGACGGCGACAGCGGAGGCCCGGAGGCGGGAAGCTGACCGGCGAGAAGCCGCGGACCGCCTCCGGGAAGCCGAGGAGGCTGCCCAGGAGGCCGTCCGGGTTCGCCAGGCTGAGAAGGCCGCTCGGGAGGAGGCCAGACTCCGCCGGGCCGGGGAGTCCGTCCGGGAGGCAGAGGCGGCGCGCGCACGCCAGGCGGCCTGCCAAACCCCCGACCCGACTCCGCCCGAGGGGACGACAACTTCCGAGGCCACCCACGACGAGGCCGCGGGCGTGCCGCTCGGGCCCGACCCCTCGGGCGACACTTGGGACGAGCCAGCTTCGAGGGACGCCCCCGAGTCCGGCACGTCTTCCGCTGCCCCACTGAGCGTGGAGCCCTTCCTACAGGCCTTGGCCGCCGCGAACAGCACGGTGCTGGACGGGTTAAGTGCCCAGATGGAGGCCCTGCAGGCGGAGCGGGCGGAGCTCGACACGGCGTGGGCGCGCGTCGAGGAGGGGCGGCGCTCGGTGGAGGCCATGGTGGAGGCTGGCCGCAAGGCGCACCACCGGCACACCTCACAGCTCGAGGCCCGTCGTAGGGAGCTGGTGGAGATCGCTAGGGAGGTGGAGGAGGAGCGGGAGACTGCCCTCATCGCCACCGCCGTGCTCGACGAGGCGCGGGACGACCTCCGCCTCCAATACGGGAGCCGGGCGGCGGAGCTAGAGGAGAAGCTCGACGCCGCCCGGGGAGTCCTTGATGCCGCCGCTGCACGGGAACGGCGGGCGGCGGAGAAAGAGGCGGCGTCCCGCCAGCGCGAAGAGGCCCTTGAGGTTCGCGCCACGGCGCTGGAGGAGCGTGCCCGCGCCCTGGACGTGAAGGAGAGAGACCTGGCGGACCGCGAGGCCGCCGTCGCCACCCGGGAGGCAACACTGGCGTCGCACGAGGCCGCCTGCGCCGAAGAGGAGTCCGCACTCCGCCTCCACGAGGACGCGCTCACCGAACGGGAGCGAGCTCTCGAGGAGGCCGAGGCCGCGGCGCAGCGGCTGGCGGACAGCCTGTTCCTCCGCGAGGCAGCGCGGGAGGAGCAGGCACGCCGCAAACTGGAAGGCGCCCGCGCCGAGAGGGCCGCACTGGATCAGCGGGCCGCTGAGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGAGCGCACAGCGGCGGGGCGGCCGCGGGCCACGGCGACCTAGCCGCCCGCCTCGCAGCCGCCGAACACACCATCGCCAAGCTGCAGGGCGCGCTGGACTCGTCCGCCGGGGAGGTCGAGGCCCTCCGCTTGGCGAGTGAGGTAGGGCCCGGCATGCTTCGGGACGCCGTCTCCCGTCTAGACCGCGCCGGGCGGCAGGCGGGTCTCTGGGGCGGGCGGCACGCGAAGTACGCCGCCAACCAGGGGGGCCTCGCCCAGTGCCTCTCAGAGATGGCCGGGGCCCTCCAGCGGCTCCCCGAGGAGCTCGAGGAGACGATCAAGTCATCCTCGAGGGACCTCGCCCGGGGGGCGGTGGAGCTCGTACTGGCAAGCTACCAGGCCAGGGACCCTGACTTCTCCCCGTGGGCAGCGCTGGAAGAGTTCCCTCCCGGAACCGAGGATGGCGCGCGCGCGCGGGTCCGGGACGCCGCCGACTACATCGTCCACAGCTTCGAGGGTACGGCCCCTCGGCTCGCGTTCGCGCTCGACTCCGACGAGGAGGGCGGTGACGACGGTGCGGACGACAGCGGCGACGAGGCCGACGGCCCGGGGGCGCCGGAGTGAGCCCCCAGGCCCCCGCCAATCTTAATAACTTCTCCTTCTTCTTCCGAGGCCTTCGGGCCCCCTTCTTGTATAGACTGATTTAATCTGTAATCAAATAAAGAGGAAA] consensusID : consensus_11292#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1559 fasta sequence [GGGCGGCGGAGACCGAAGCGGCGTCCCGGCGGCGCGAAGAGGCCCTTGAGGCGCGCGCCATGGCGCTGGAAGAGCGCGCCTGCGTCGTGGAGAGGGATCTGGCGGACCGCGAGGCCGCCGTCACCATCCGGGAAGCAACGCTGGCGGCGCACGAGGCTGCCTGCGCCGAAGAAGAGCTCGCGCTCCGCCTCCGCGAGGACGCGCTCTCCGAGCGGGAGCGAGCTCTCGAGGGGGCCGAGGCCGCGGCGCAACAGCTGGCGGACAGCCTGTCCCTCCGCGAGGCAGCGCAGGAGGAGCAAGCGCGCCGTAATCTGGAAGGTGCCCGCGCCGAGAGGGCCGCACTGAACCAACGGGCCGCTGAGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGGGCGCGCAGCGGCGGGGCGGCCGCGGGCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACACACCATCGCCGATCTGCAGGGCGCGCTGGACTCGTCCGCCGGGGAGGTCGAAGCCCTCCGCTTGGCAGGCGAGGTTGGGCCCGGCATGCTTTGGGACGCCGTCTCCCGCCTAGATTGCGCCGGTCGGCAAGTGGGCCTCTGGAGAGGGCGGACCGTAAAGTACGCCGCCAACCAGGGAGGTCTCGCCCAGCGCCTCTCGAAGATGGCCGAAGGTCTCCAACGGCTCCCCGAGGAGCTCGAGAAGACAATTAAGTCATCCTCGAGGGACCTCGCCCAAGGAGCGGTGGAGCTCGTCCTGGCGAGTTACCAGGCCAGGGACCCCAATTTCTCTCCATGGATGGCGCTGGATGAGTTCCCTCCTGGGACCGAGGACCGCGCGCGCGCGCAGGTCCGGGATGCCGCCGACCATATCGTCGACAGCTTTGAGGGCTCGGCCCCTCGGCTCGCGTTCGCCCCCAACTCCGACGAGGAGGGCAATGCCGGTGGTGCAGACGACAGTGACGACGAGGCCGGCGATCCGGGCGCATTGAATTGAGCCCCCAGATCTTCTTTTCTTTCTTCTAAGGCCTTCGGGCCTCTTTTTTGTATAGATCAACTTAATCTGTAATC-AAAAATGAAGAAATTTTTGTGTTAATTTCATCTTGCTGTGAGTATGAGATGAGGATGATCTGTGCCGTGGTCCTTTTGTGTCTTAGCTTGAATAAGGGCTTGTGCCCAGGTTCTGGTCCTCAAAAGGCGCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCGAGACTGGCCAGGCCGGGAACGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGTTTTTGCCGATTCCCCCCCGGAGTTCACCACGCCTCGGGGCACGGCTCGGTTCTGGGCCCCGTTTGGCGATTTTAGCCGACCCGAGCCCCCGAGGGCAGGATTGAGCACGAGTGACCTATTTCAAGTCAAGATTCTTCAAAAGGAAAAAACAGCACAGATACAGCCTTTAGGAAATTGAAACTGCTTTTATAGAAATTCAGATATAAGAGAAATAAGAATATGCATATGTTGTAGCCCCCGGCCAACCCTGCACGCCCGAGGGGGGTG] [-] EMBL CB661284 [GGGCGGCGGAGACCGAAGCGGCGTCCCGGCGGCGCGAAGAGGCCCTTGAGGCGCGCGCCATGGCGCTGGAAGAGCGCGCCTGCGTCGTGGAGAGGGATCTGGCGGACCGCGAGGCCGCCGTCACCATCCGGGAAGCAACGCTGGCGGCGCACGAGGCTGCCTGCGCCGAAGAAGAGCTCGCGCTCCGCCTCCGCGAGGACGCGCTCTCCGAGCGGGAGCGAGCTCTCGAGGGGGCCGAGGCCGCGGCGCAACAGCTGGCGGACAGCCTGTCCCTCCGCGAGGCAGCGCAGGAGGAGCAAGCGCGCCGTAATCTGGAAGGTGCCCGCGCCGAGAGGGCCGCACTGAACCAACGGGCCGCTGAGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGGGCGCGCAGCGGCGGGGCGGCCGCGGGCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACACACCATCGCCGATCTGCAGGGCGCGCTGGACTCGTCCGCCGGGGAGGTCGAAGCCCTCCGCTTGGCAGGCGAGGTTGGGCCCGGCATGCTTTGGGACGCCGTCTCCCGCCTAGATTGCGCCGGTCGGCAAGTGGGCCTCTGGAGAGGGCGGACCGTAAAGTACGCCGCCAACCAGGGAGGTCTCGCCCAGCGCCTCTCGAAGATGGCCGAAGGTCTCCAACGGCTCCCCGAGGAGCTCGAGA ] [+] EMBL AK119914 [ AGAGGGATCTGGCGGACCGCGAGGCCGCCGTCACCATCCGGGAAGCAACGCTGGCGGCGCACGAGGCTGCTTGCGCCGAAGAAGAGTTCACGCTCCGCCTCCGCGAGGACGCACTCACCGAGCGGGAGCGAGCTCTCGAGGGGGCCGAGGCCGCGGCGCAACAGCTGGCGGATAGCCTGTCCCTCCGCGAGGCAGCGCAGGAGGAGCAGGCGCGCCGTAATCTGGAAGGTGCCCGCGCCGAGAGGGCCGTACTGAACCAACGGGCCGCTGAGCTCGAGGCGCGGGTGAAGGAGCTGGACGCGAGGGCGCGCAGCGGCGGGGCGGCCACGAGCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACGCACCATCGCCGATCTGCAGGGCGCGCTGGACTCGTCCGCCGGGGAGGTCGAAGCCCTCCGCTTGGCAGGCGAGGTAGGGCCCGGCATGCTTTGGGACGCCGTCTCCCGCCTAGATTGCGCCGGTCGGCAAGTGGGCCTCTGGAGAGGGCGGACCGTAAAGTACGCCGCCAACCAGGGAGGCCTCGCCCAGCGCCTCTCGAAGATGGCCGGGGCTCTCCAACGGCTTCCCGAGGAGCTCGAGAAGACAATTAAGTCATCCTCGAGGGACCTCGCCCAAGGAGCGGTGGAGCTCGTCCTGGCGAGTTACCAGGCCAGGGACCCCAATTTCTCTCCATGGATGGCGCTGGATGAGTTCCCTCCTGGGACCGAGGACCGCGCGCGCGCGCAGGTCCGGGATGCCGCCGACCATATCGTCGACAGCTTTGAGGGCTCGGCCCCTCGGCTCGCGTTCGCCCCCAACTCCGACGAGGAGGGCAATGCCGGTGGTGCAGACGACAGTGACGACGAGGCCGGCGATCCGGGCGCATTGAATTGAGCCCCCAGATCTTCTTTTCTTTCTTCTAAGGCCTTCGGGCCTCTTTTTTGTATAGATCAACTTAATCTGTAATCAAAAAATGAAGAAATTTTTGTGTTAATTTCATCTTGCTGTGAGTATGAGATGAGGATGATCTGTGCCGTGGTCCTTTTGTGTCTTAGCTTGGATAAGGGCTTGTGCCCAGGTTCTAGTCCTCAAAAGGCGCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCGAGACTGGCCAGGCCGGGAACGTGGTGACCGAGGGTTATGGGTGACCTGATTGTGGGTTTTTGCCGATTCCCCCCCGGAGTTCACCACGCCTCGGGGCACGGCTCGGTTCTGGGCCCCGTTTGGCGATTTTAGCCGACCCGAGCCCCCGAGGGCAGGATTGAGCACGAGTGACCTATTTCAAGTCAAGATTCTTCAAAAGGAAAAAACAGCACAGATACAGCCTTTAGGAAATTGAAACTGCTTTTAT ] [+] EMBL CB649478 [ CCTTTGGGCCTCTTTTTTGTATAGATCAACTTAATCTGTAATC AAAAATGAAGAAATTTTTGTGTTAATTTCATCTTGCTGTGAGTATGAGATGAGGATGATCTGTGCCGTGGTCCTTTTGTGTCTTAGCTTGAATAAGGGCTTGTGCCCAGGTTCTGGTCCTCAAAAGGCGCGGGTCGGGGCTAGTTCCTGGGGAGATCCACATGTCGAGACTGGCCAGGCCGGGAACGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGTTTTTGCCGATTCCCCCCCGGAGTTCACCACGCCTCGGGGCACGGCTCGGTTCTGGGCCCCGTTTGGCGATTTTAGCCGACCCGAGCCCCCGAGGGCAGGATTGAGCACGAGTGACCTATTTCAAGTCAAGATTCTTCAAAAGGAAAAAACAGCACAGATACAGCCTTTAGGAAATTGAAACTGCTTTTATAGAAATTCAGATATAAGAGAAATAAGAATATGCATATGTTGTAGCCCCCGGCCAACCCTGCACGCCCGAGGGGGGTG] [+] EMBL CB636304 [ CCTTCGGGCCTCTTTTTTGTATAAATCAACTTAATCTGTAATC AAAAATGAAGAAATTTTTGTGTTAATTTCATCTTGCTGTGAGTATGAGATGAGGATGATCTGTGCCGTGGTCCTTTTGTGTCTTAGCTTGAATAAGGGCTTGTGCCCAGGTTCTGGTCCTCAAAAGGCGCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCGAGACTGGCCAGGCCGGGAACGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGTTTTTGCCGATTCCCCCCCGGAGTTCACCACGCCTCGGGGCACGGCTCGGTTCTGGGCCCCGTTTGGCGATTTTAGCCGACCCGAGCCCCCGAGGGCAGGATTGAGCACGAGTGACCTATTTCAAGTCAAGATTCTTCAAAATGAAAAAACAGCACAGATACACCCTTTAGGAAATTG ] consensusID : consensus_11292#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 443 fasta sequence [AATAAAAGCAGTTTCAATTTCCTAAAGGTTGTGTCTGTGCCGTTTTTCCTTCTGAAGAATCTTAACTTGAAATAAGGTCACTCGTGCTCAACCTTGCCCTCGGGGGCTCGGTTCGGTCAGCTAAAATCGCCAAGCGGGGCCCAGAACCGAGCCGTGCCCCAGGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCACAATCGGGTCACCCATAACCCTCGGTCACCATGTTCCCGGCCTGGCCAGTCTCGACATGTGGATCTCCCCAGGCACTAGCCCCGACCCGAGCCATTTGAGGATCGGGACTTGAGCACGAGCCCTTAAATCAAGCTAAAATGCAAAAGGACCACGGCACAAATCATCCTCAACTCATATGCATAGCAAAATAAAGTTAACATAGAAATTTTTCATCATTTTTGATTGCAGATTAAGTTGATCTA] [+] EMBL AK062314 [AATAAAAGCAGTTTCAATTTCCTAAAGGTTGTGTCTGTGCCGTTTTTCCTTCTGAAGAATCTTAACTTGAAATAAGGTCACTCGTGCTCAACCTTGCCCTCGGGGGCTCGGTTCGGTCAGCTAAAATCGCCAAGCGGGGCCCAGAACCGAGCCGTGCCCCAGGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCACAATCGGGTCACCCATAACCCTCGGTCACCATGTTCCCGGCCTGGCCAGTCTCGACATGTGGATCTCCCCAGGCACTAGCCCCGACCCGAGCCATTTGAGGATCGGGACTTGAGCACGAGCCCTTAAATCAAGCTAAAATGCAAAAGGACCACGGCACAAATCATCCTCAACTCATATGCATAGCAAAATAAAGTTAACATAGAAATTTTTCATCATTTTTGATTGCAGATTAAGTT ] [-] EMBL CB639838 [ GGTCACTCGTGCTCAACCTTGCCCTCGGGGGCTCGGTTCGGTCAGCTAAAATCGCCAAGCGGGGCCCAGAACCGAGCCGTGCCCCAGGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCACAATCGGGTCACCCATAACCCTCGGTCACCATGTTCCCGGCCTGGCCAGTCTCGACATGTGGATCTCCCCAGGCACTAGCCCCGACCCGAGCCATTTGAGGATCGGGACTTGAGCACGAGCCCTTAAATCAAGCTAAAATGCAAAAGGACCACGGCACAAATCATCCTCAACTCATATGCATAGCAAAATAAAGTTAACATAGAAATTTTTCATCATTTTTGATTGCAGATTAAGTTGATCTA] consensusID : consensus_11292#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 439 fasta sequence [TTTTGAAGAATCTTGACTTGAAATAGGTCACTCGTGCTCAATCCTGCCCTCGGGGGCTCGGGTCGGCTAAAATCGCCAAACGGGGCCCAGAACCGAGCCGTGCCCCGAGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCACAATCGGGTCACCCATAACCCTCGGTCACCACGTTCCCGGCCTGGCCAGTCTCGACATGTGGATCTCCCCAGGAACTAGCCCCGACCCGCGCCTTTTGAGGACCAGAACCTGGGCACAAGCCCTTATTCAAGCTAAGACACAAAAGGACCACGGCACAGATCATCCTCATCTCATACTCACAGCAAGATGAAATTAACACAAAAATTTCTTCATTTTTGATTACAGATTAAGTTGATCTATACAAAAAGAGGNCCAAAGGCCTTTAGAAGAAGAAAAGAAGAAAACTGAAGAT] [+] EMBL C72786 [TTTTGAAGAATCTTGACTTGAAATAGGTCACTCGTGCTCAATCCTGCCCTCGGGGGCTCGGGTCGGCTAAAATCGCCAAACGGGGCCCAGAACCGAGCCGTGCCCCGAGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCACAATCGGGTCACCCATAACCCTCGGTCACCACGTTCCCGGCCTGGCCAGTCTCGACATGTGGATCTCCCCAGGAACTAGCCCCGACCCGCGCCTTTTGAGGACCAGAACCTGGGCACAAGCCCTTATTCAAGCTAAGACACAAAAGGACCACGGCACAGATCATCCTCATCTCATACTCACAGCAAGATGAAATTAACACAAAAATTTCTTCATTTTTGATTACAGATTAAGTTGATCTATACAAAAAGAGGNCCAAAGGCCTTTAGAAGAAGAAAAGAAGAAAACTGAAGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GTTTTTCTTCTGCCTCAGCGAGATCCCGTCGCGCCCCCCCCCGCCATTCCAAGTCCGGCC 60 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GGTCTGAGGCCGAGGAGACGGCGACAGCGGAGGCCCGGAGGCGGGAAGCTGACCGGCGAG 120 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AAGCCGCGGACCGCCTCCGGGAAGCCGAGGAGGCTGCCCAGGAGGCCGTCCGGGTTCGCC 180 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGGCTGAGAAGGCCGCTCGGGAGGAGGCCAGACTCCGCCGGGCCGGGGAGTCCGTCCGGG 240 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGGCAGAGGCGGCGCGCGCACGCCAGGCGGCCTGCCAAACCCCCGACCCGACTCCGCCCG 300 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGGGGACGACAACTTCCGAGGCCACCCACGACGAGGCCGCGGGCGTGCCGCTCGGGCCCG 360 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ACCCCTCGGGCGACACTTGGGACGAGCCAGCTTCGAGGGACGCCCCCGAGTCCGGCACGT 420 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CTTCCGCTGCCCCACTGAGCGTGGAGCCCTTCCTACAGGCCTTGGCCGCCGCGAACAGCA 480 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CGGTGCTGGACGGGTTAAGTGCCCAGATGGAGGCCCTGCAGGCGGAGCGGGCGGAGCTCG 540 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ACACGGCGTGGGCGCGCGTCGAGGAGGGGCGGCGCTCGGTGGAGGCCATGGTGGAGGCTG 600 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GCCGCAAGGCGCACCACCGGCACACCTCACAGCTCGAGGCCCGTCGTAGGGAGCTGGTGG 660 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGATCGCTAGGGAGGTGGAGGAGGAGCGGGAGACTGCCCTCATCGCCACCGCCGTGCTCG 720 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ACGAGGCGCGGGACGACCTCCGCCTCCAATACGGGAGCCGGGCGGCGGAGCTAGAGGAGA 780 consensus_11292#1 ------------------------------------------------------------ consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGCTCGACGCCGCCCGGGGAGTCCTTGATGCCGCCGCTGCACGGGAACGGCGGGCGGCGG 840 consensus_11292#1 ---------------------------------------------------GGGCGGCGG 9 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGAAAGAGGCGGCGTCCCGCCAGCGCGAAGAGGCCCTTGAGGTTCGCGCCACGGCGCTGG 900 consensus_11292#1 AGACCGAAGCGGCGTCCCGGCGGCGCGAAGAGGCCCTTGAGGCGCGCGCCATGGCGCTGG 69 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGGAGCGTGCCCGCGCCCTGGACGTGAAGGAGAGAGACCTGGCGGACCGCGAGGCCGCCG 960 consensus_11292#1 AAGAGCGCGCCTGCGTCGTGGA---------GAGGGATCTGGCGGACCGCGAGGCCGCCG 120 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 TCGCCACCCGGGAGGCAACACTGGCGTCGCACGAGGCCGCCTGCGCCGAAGAGGAGTCCG 1020 consensus_11292#1 TCACCATCCGGGAAGCAACGCTGGCGGCGCACGAGGCTGCCTGCGCCGAAGAAGAGCTCG 180 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CACTCCGCCTCCACGAGGACGCGCTCACCGAACGGGAGCGAGCTCTCGAGGAGGCCGAGG 1080 consensus_11292#1 CGCTCCGCCTCCGCGAGGACGCGCTCTCCGAGCGGGAGCGAGCTCTCGAGGGGGCCGAGG 240 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CCGCGGCGCAGCGGCTGGCGGACAGCCTGTTCCTCCGCGAGGCAGCGCGGGAGGAGCAGG 1140 consensus_11292#1 CCGCGGCGCAACAGCTGGCGGACAGCCTGTCCCTCCGCGAGGCAGCGCAGGAGGAGCAAG 300 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CACGCCGCAAACTGGAAGGCGCCCGCGCCGAGAGGGCCGCACTGGATCAGCGGGCCGCTG 1200 consensus_11292#1 CGCGCCGTAATCTGGAAGGTGCCCGCGCCGAGAGGGCCGCACTGAACCAACGGGCCGCTG 360 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 AGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGAGCGCACAGCGGCGGGGCGGCCGCGG 1260 consensus_11292#1 AGCTCGAGGCGCGGGCGAAGGAGCTGGACGCGAGGGCGCGCAGCGGCGGGGCGGCCGCGG 420 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GCCACGGCGACCTAGCCGCCCGCCTCGCAGCCGCCGAACACACCATCGCCAAGCTGCAGG 1320 consensus_11292#1 GCGAAAGCGACTTAGCCGCCCGCCTCGCAGCTGCCGAACACACCATCGCCGATCTGCAGG 480 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GCGCGCTGGACTCGTCCGCCGGGGAGGTCGAGGCCCTCCGCTTGGCGAGTGAGGTAGGGC 1380 consensus_11292#1 GCGCGCTGGACTCGTCCGCCGGGGAGGTCGAAGCCCTCCGCTTGGCAGGCGAGGTTGGGC 540 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 CCGGCATGCTTCGGGACGCCGTCTCCCGTCTAGACCGCGCCGGGCGGCAGGCGGGTCTCT 1440 consensus_11292#1 CCGGCATGCTTTGGGACGCCGTCTCCCGCCTAGATTGCGCCGGTCGGCAAGTGGGCCTCT 600 consensus_11292#2 -----------------------------------AATAAAAGCAGTTTCAATTTCCTAA 25 consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 GGGGCGGGCGGCACGCGAAGTACGCCGCCAACCAGGGGGGCCTCGCCCAGTGCCTCTCAG 1500 consensus_11292#1 GGAGAGGGCGGACCGTAAAGTACGCCGCCAACCAGGGAGGTCTCGCCCAGCGCCTCTCGA 660 consensus_11292#2 AGGTTGTGTCTGTGCCGTTTTTCCTTCTGAAGAATCTTAACTTGA-AATAAGGTCACTCG 84 consensus_11292#3 ------------------------TTTTGAAGAATCTTGACTTGA-AATA-GGTCACTCG 34 consensus_11292#0 AGATGGCCGGGGCCCTCCAGCGGCTCCCCGAGGAGCTCGAGGAGACGATCAAGTCATCCT 1560 consensus_11292#1 AGATGGCCGAAGGTCTCCAACGGCTCCCCGAGGAGCTCGAGAAGACAATTAAGTCATCCT 720 * ** * ** * ** ** **** * consensus_11292#2 TGCTCAACCTTGCCCTCGGGG-GCTCGGTTCGGTCAGCTAAAATCGCCAAGC--GGGGCC 141 consensus_11292#3 TGCTCAATCCTGCCCTCGGGG-GCTCGG----GTCGGCTAAAATCGCCAAAC--GGGGCC 87 consensus_11292#0 CGAGGGACCTCGCCCGGGGGGCGGTGGAGCTCGTACTGGCAAGCTACCAGGCCAGGGACC 1620 consensus_11292#1 CGAGGGACCTCGCCCAAGGAGCGGTGGAGCTCGTCCTGGCGAGTTACCAGGCCAGGGACC 780 * * * **** ** * * * * ** * *** * *** ** consensus_11292#2 CAGAACCGAGCCGTGCCCCAGGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCAC 201 consensus_11292#3 CAGAACCGAGCCGTGCCCCGAGGCGTGGTGAACTCCGGGGGGGAATCGGCAAAAACCCAC 147 consensus_11292#0 CTGACTTCTCCCCGTGGGCAGCGCTGGAAGAGTTCCCTCCCGGAACCGAGGATGGCGCGC 1680 consensus_11292#1 CCAATTTCTCTCCATGGATGGCGCTGGATGAGTTCCCTCCTGGGACCGAGGACCGCGCGC 840 * * * ** * ** *** ** * ** * * * * consensus_11292#2 AATCGGGTCACCCATA-ACCCTCGGTCACCATGTTCCCGGCCTGGCCAGTCTCGACATGT 260 consensus_11292#3 AATCGGGTCACCCATA-ACCCTCGGTCACCACGTTCCCGGCCTGGCCAGTCTCGACATGT 206 consensus_11292#0 GCGCGCGGGTCCGGGACGCCGCCGACTACATCGTCCACAGCTTCGAGGGTACGGCCCCTC 1740 consensus_11292#1 GCGCGCAGGTCCGGGATGCCGCCGACCATATCGTCGACAGCTTTGAGGGCTCGGCCCCTC 900 ** ** * ** ** * ** * ** * * * * * consensus_11292#2 GGATCTCCCCAGGCACTAGCCCCGACCCGAGCCATTTGAGGATCGGGACTTGAGCACGAG 320 consensus_11292#3 GGATCTCCCCAGGAACTAGCCCCGACCCGCGCCTTTTGAGGACCAGAACCTGGGCACAAG 266 consensus_11292#0 GGCTCGCGTTCGCGCTCGACTCCGAC--GAGGAGGGCGGTGACGACGGTGCGGACGACAG 1798 consensus_11292#1 GGCTCGCGTTCGCCCCCAACTCCGAC--GAGGAGGGCAATGCCGGTGGTGCAGACGACAG 958 ** ** * * * ***** * * * * ** consensus_11292#2 CCCTTAAATCAAGCTAAAATGCAAAAGGACCACGGCACAAATCATCCTCAACTC-----A 375 consensus_11292#3 CCCTTAT-TCAAGCTAAGACACAAAAGGACCACGGCACAGATCATCCTCATCTC-----A 320 consensus_11292#0 CGGCGAC--GAGGCC--GACGGCCCGGGGGCGCCGGAGTGAGCCCCCAGGCCCCCGCCAA 1854 consensus_11292#1 TGACGAC--GAGGCC--GGCGATCCGGGCGCATTGAATTGAGCCCCCAGATC-------- 1006 * * ** ** * * * * * ** * consensus_11292#2 TATGCATAGCAAAATAAAGTTAACATAGAAATTTTTCATCATTTTTGATTGCAGATTAAG 435 consensus_11292#3 TACTCACAGCAAGATGAAATTAACACAAAAATTTCT--TCATTTTTGATTACAGATTAAG 378 consensus_11292#0 TCTTAATAACTTCTCCTTCTTCTTCCGAGGCCTTCGGGCCCCCTTCTTGTATAGACTGAT 1914 consensus_11292#1 ----------TTCTTTTCTTTCTTCTAAGGCCTTCGGGCCTCTTTTTTGTATAGATCAAC 1056 ** ** * ** * *** * consensus_11292#2 TTGATCTA---------------------------------------------------- 443 consensus_11292#3 TTGATCTATACAAAAAGAGGNCCAAAGGCCTTTAGAAGAAGAAAAGAAGAAAACTGAAGA 438 consensus_11292#0 TTAATCTGTAATCAAATAAAGAGGAAA--------------------------------- 1941 consensus_11292#1 TTAATCTGTAATCAAA-AATGAAGAAATTTTTGTGTTAATTTCATCTTGCTGTGAGTATG 1115 ** **** consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 T----------------------------------------------------------- 439 consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 AGATGAGGATGATCTGTGCCGTGGTCCTTTTGTGTCTTAGCTTGAATAAGGGCTTGTGCC 1175 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 CAGGTTCTGGTCCTCAAAAGGCGCGGGTCGGGGCTAGTGCCTGGGGAGATCCACATGTCG 1235 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 AGACTGGCCAGGCCGGGAACGTGGTGACCGAGGGTTATGGGTGACCCGATTGTGGGTTTT 1295 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 TGCCGATTCCCCCCCGGAGTTCACCACGCCTCGGGGCACGGCTCGGTTCTGGGCCCCGTT 1355 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 TGGCGATTTTAGCCGACCCGAGCCCCCGAGGGCAGGATTGAGCACGAGTGACCTATTTCA 1415 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 AGTCAAGATTCTTCAAAAGGAAAAAACAGCACAGATACAGCCTTTAGGAAATTGAAACTG 1475 consensus_11292#2 ------------------------------------------------------------ consensus_11292#3 ------------------------------------------------------------ consensus_11292#0 ------------------------------------------------------------ consensus_11292#1 CTTTTATAGAAATTCAGATATAAGAGAAATAAGAATATGCATATGTTGTAGCCCCCGGCC 1535 consensus_11292#2 ------------------------ consensus_11292#3 ------------------------ consensus_11292#0 ------------------------ consensus_11292#1 AACCCTGCACGCCCGAGGGGGGTG 1559 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||