These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11323#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1468 fasta sequence [CTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCATTCGTCACGTACCATGTCCTTTGACTGAATGGGCATATCATTGTGCTTTCCATGTGTATAATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTATTTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATCATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAACTATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATTGGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTCTACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGATCATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATGGCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTTCATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAAAGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTTGAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAGCCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGGACATTAATGTTTAGAGCACTTTCATAGTGGTCTCTACTGGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACAACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACCACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGGTCTAGATCAG] [+] EMBL AK122064 [CTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCATTCGTCACGTACCATGTCCTTTGACTGAATGGGCATATCATTGTGCTTTCCATGTGTATAATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTATTTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATCATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAACTATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATTGGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTCTACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGATCATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATGGCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTTCATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAAAGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTTGAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAGCCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGGACATTAATGTTTAGAGCACTTTCATAGTGGTCTCTACTGGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACAACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACCACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGGTCTAGATCAG] consensusID : consensus_11323#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1268 fasta sequence [GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA] [+] EMBL AK102900 [GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCTATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAAC ] [+] EMBL AK073252 [ GCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA] [+] EMBL C28087 [ GCTTGTNAGACCAGGACGGCCGGCAGAGGTGGCGCCANTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTNTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAG CAANTATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGNTTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC ACTGCTGANG AGGATCAATAATAGNGGCTct ] [+] EMBL AU092830 [ GAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTNTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTNCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAAaaaaa ] [+] EMBL OSC24031 [ TGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTT ] consensusID : consensus_11323#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1252 fasta sequence [AAAAAAAAAAAAAAAAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGTCTTTGCCTGCCTATGATTTTT] [+] EMBL AK105427 [AAAAAAAAAAAAAAAAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGTCTTTGCCTGCCTATGATTTTT] consensusID : consensus_11323#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence [TTTTTTTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCCTCATACTATGAATACAAAGAAGACATAAGACAGACTCAAATAAAATTATGATACCACTTTAATTCAATAAAATCATAGGCAGGTACGGACTGTTACTTATTTAATTAAACGGATAGTAGCCAAAGGGGCTAAAATTTATCACGCTACGAGTACAACCAAGAGATAGGAAAGAGCTACTACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGGCGACTTCCATTGCTTCAACATTGGCCATGAGAATTTCTCTTAACTTTCTTCTCCTGTCCTTAGCCAAGCTAATGCATTCCTTAATAGTTGTCATAGATGTCACTGCACCTCCAGGTTTTTGTATTGACACTATCTGGTCTGAAGAATCGAGAACAATAGTCACCAGAAGTCTCTATTATTGATTCTTCTTCAGCAGTTGGATCCGCTAGAACATTATCCTTGCGAAGTGCACATGTAAGGGAAAATGGAACATTAGTAATCGGAAGCTTCCTCTTTTCTCTGTTTACCAATTAATATTTTGGCTTTGCCTTCATTGGCCCCAACAGGAAATACCTCTACCATCATGCACCGGCTGGAACCCAAGGAATTTGCCAAGGGGGTAAATGGG] [+] EMBL CA762086 [TTTTTTTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCCTCATACTATGAATACAAAGAAGACATAAGACAGACTCAAATAAAATTATGATACCACTTTAATTCAATAAAATCATAGGCAGGTACGGACTGTTACTTATTTAATTAAACGGATAGTAGCCAAAGGGGCTAAAATTTATCACGCTACGAGTACAACCAAGAGATAGGAAAGAGCTACTACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGGCGACTTCCATTGCTTCAACATTGGCCATGAGAATTTCTCTTAACTTTCTTCTCCTGTCCTTAGCCAAGCTAATGCATTCCTTAATAGTTGTCATAGATGTCACTGCACCTCCAGGTTTTTGTATTGACACTATCTGGTCTGAAGAATCGAGAACAATAGTCACCAGAAGTCTCTATTATTGATTCTTCTTCAGCAGTTGGATCCGCTAGAACATTATCCTTGCGAAGTGCACATGTAAGGGAAAATGGAACATTAGTAATCGGAAGCTTCCTCTTTTCTCTGTTTACCAATTAATATTTTGGCTTTGCCTTCATTGGCCCCAACAGGAAATACCTCTACCATCATGCACCGGCTGGAACCCAAGGAATTTGCCAAGGGGGTAAATGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11323#1 GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATG 60 consensus_11323#2 ----------------------------------------------AAAAAAAAAAAAAA 14 consensus_11323#0 -------------------------------------CTTTCCCACCCACCCGTGAGATG 23 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 GCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCG 120 consensus_11323#2 AAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTC 74 consensus_11323#0 GCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCG 83 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 TACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 180 consensus_11323#2 CTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 134 consensus_11323#0 TACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 143 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 240 consensus_11323#2 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 194 consensus_11323#0 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 203 consensus_11323#3 -------------------------------------------------------TTTTT 5 * consensus_11323#1 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 299 consensus_11323#2 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 253 consensus_11323#0 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 262 consensus_11323#3 TTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCC-TCATACT---ATGAATACAAAGA 61 ** * * * * * * ** *** ** * ** *** consensus_11323#1 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 359 consensus_11323#2 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 313 consensus_11323#0 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 322 consensus_11323#3 AGACATAA-GACAGACTCAAATAAAATTAT-GAT-ACCACTTTAATTCAATAAAATCATA 118 ** * * * * *** * * ** * * ** * * * * * * consensus_11323#1 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 419 consensus_11323#2 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 373 consensus_11323#0 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 382 consensus_11323#3 GGCAGGTACGGACTGTTACTTATTTAATTAAAC-GGATAGTAGCCAAAGGGGCTAAAATT 177 * ***** * ** * * *** * * ** *** * * * consensus_11323#1 CATCTCCAAGAACCTAGAGGACATTCTCATGAG-----------CTCAGGGATGCTAAAT 468 consensus_11323#2 CATCTCCAAGAACCTAGAGGACATTCTCATGAG-----------CTCAGGGATGCTAAAT 422 consensus_11323#0 CATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCAT 442 consensus_11323#3 TATCAC-----GCTACGAGTACAAC--CAAGAG-----------ATAGGAAAGAGCTACT 219 *** * * *** *** ** *** * * consensus_11323#1 TTGA-AGGAGCTCTGTTTGATC-AGTGGGAAGGCATCT-----TGGTTAGCATACCTGGA 521 consensus_11323#2 TTGA-AGGAGCTCTGTTTGATC-AGTGGGAAGGCATCT-----TGGTTAGCATACCTGGA 475 consensus_11323#0 TCGTCACGTACCATGTCCTTTG-ACTGAATGGGCATATCATTGTGCTTTCCATGTGTATA 501 consensus_11323#3 ACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGG 279 * ** * * ** * * ** * consensus_11323#1 ---TGTCTATTGTTTGAATG--CTGATGGGTCTCT----------ATTCGACG------- 559 consensus_11323#2 ---TGTCTATTGTTTGAATG--CTGATGGGTCTCT----------ATTCGACG------- 513 consensus_11323#0 ATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTAT 561 consensus_11323#3 CGACTTCCATTGCTTCAACA---------TTGGCC----------ATGAGAAT------- 313 *** ** ** * * ** * consensus_11323#1 ---CTGCACTAATCTCAGCTG--TTGCTGCATTTACACATTTGGA--------------- 599 consensus_11323#2 ---CTGCACTAATCTCAGCTG--TTGCTGCATTTACACATTTGGA--------------- 553 consensus_11323#0 TTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATC 621 consensus_11323#3 ----TTCTCTTAACTTTCTTC---TCCTGTCCTTAGCCAAGCTAAT-------------- 352 * * * * * * ** * ** * consensus_11323#1 ----AATTCCTTTGGTATCTGTCG-GTGATGATGGTAGA--GTATT--TACTGTTGGGGG 650 consensus_11323#2 ----AATTCCTTTGGTATCTGTCG-GTGATGATGGTAGA--GTATT--TACTGTTGGGGG 604 consensus_11323#0 ATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAAC 681 consensus_11323#3 --------------GCATTCCTTA-ATAGTTGTCATAGA---TGTCACTGCACCTCCAGG 394 ** * * * * * * * * consensus_11323#1 CAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGG--AAGCTTACGATT 708 consensus_11323#2 CAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGG--AAGCTTACGATT 662 consensus_11323#0 TATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATT 741 consensus_11323#3 TTTTTGTATTGACACTA--TCTGGTCTGAAGAATCGAGAACAATAG---TCACCAGAAGT 449 * * * * * ** * * * * consensus_11323#1 ACTAATGTTCCATTTTCCCTT-ACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC 767 consensus_11323#2 ACTAATGTTCCATTTTCCCTT-ACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC 721 consensus_11323#0 GGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTC 801 consensus_11323#3 CTCTATTATTGATTCTTCTTCAGCAGTTGGA-TCCGCTAGAACATTATCCTTGCGAAGTG 508 ** * * * * * * * * * consensus_11323#1 AACT-GCTGAAGAAGAATCAATAATAGAGACTTC-------TGTGACTATTGTTCTCGAT 819 consensus_11323#2 AACT-GCTGAAGAAGAATCAATAATAGAGACTTC-------TGTGACTATTGTTCTCGAT 773 consensus_11323#0 TACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGAT 861 consensus_11323#3 CACATGTAAGGGAAAATGGAACATTAGTAATCGGA------AGCTTCCTCTTTTCTCTGT 562 ** * * * * * * * * * * ** * * consensus_11323#1 TCTTCAGACCAGATAGTGT-CAATACA-----AAAACCTGGAGGTGCAGTGACATCTATG 873 consensus_11323#2 TCTTCAGACCAGATAGTGT-CAATACA-----AAAACCTGGAGGTGCAGTGACATCTATG 827 consensus_11323#0 CATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATG 921 consensus_11323#3 TTACCAATTAATATTTTGG-CTTTGCCTTCA-TTGGCCCCAACAGGAAATACCTCTACCA 620 * * * * * * * * * consensus_11323#1 ACAACTATTAAGGA------ATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGA 927 consensus_11323#2 ACAACTATTAAGGA------ATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGA 881 consensus_11323#0 GCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAA 981 consensus_11323#3 TCATGCACCGGCTGGA----ACCCAAGGAATTTGCCAAGGGGGTAAATGGG--------- 667 ** * * * * * ** consensus_11323#1 GAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTG-TCA 986 consensus_11323#2 GAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTG-TCA 940 consensus_11323#0 GGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTT 1041 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 CAGTTCTGATTCAGTGAATCTAACCAAATTATT-----TTTGTAGTAGCTCT--TTCCTA 1039 consensus_11323#2 CAGTTCTGATTCAGTGAATCTAACCAAATTATT-----TTTGTAGTAGCTCT--TTCCTA 993 consensus_11323#0 CATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAA 1101 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 TCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAAT 1099 consensus_11323#2 TCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAAT 1053 consensus_11323#0 AGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTT 1161 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 TAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGT--ATCATAA 1157 consensus_11323#2 TAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGT--ATCATAA 1111 consensus_11323#0 GAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAG 1221 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 TTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCT 1217 consensus_11323#2 TTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCT 1171 consensus_11323#0 CCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGG-ACATTAATGTTTAGAGCAC 1280 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 ATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA--------- 1268 consensus_11323#2 ATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGT 1231 consensus_11323#0 TTTCATAGTGGTCTCTACT--GGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACA 1338 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 ------------------------------------------------------------ consensus_11323#2 CTTTGCCTGCCTATGATTTTT--------------------------------------- 1252 consensus_11323#0 ACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACC 1398 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 ------------------------------------------------------------ consensus_11323#2 ------------------------------------------------------------ consensus_11323#0 ACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGG 1458 consensus_11323#3 ------------------------------------------------------------ consensus_11323#1 ---------- consensus_11323#2 ---------- consensus_11323#0 TCTAGATCAG 1468 consensus_11323#3 ---------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||