These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11338#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1720 fasta sequence [AAAAAAACCATGAAAAGAGGAAACCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC-TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTCTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGACAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT-GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA-GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATACGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTTGTGTTAAAAAAAAAAAAAAAAAAA] [+] EMBL CB649040 [AAAAAAACCATGAAAAGAGGAAACCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATA ] [+] EMBL AK121843 [ CCGAACTCCGCTATAAAACCGCGCCTCCGCCGCGACGAAGCCGACCAAGTGAAGCAGCGCCGCCGCCGCCGACGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTAC TGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGGTCGCTTTGGTTTCAAGATTGAAACATGAAAACTTTGTAGATATGTTGGGATACTGCACGGAGGGTAACCTTCGCCTAGTAGCATATGAATTTGCCACTATGGGTTCACTGCATGATGTTCTACATGGAAGAAAAGGGGTGCAAGGTGCACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATTGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTCTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGACAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATACGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTACAGAATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTT ] [+] EMBL AU184279 [ CGACGACGACGACGACGACGAAACCGCCGGAGGCAGAGAGGAGCAGAGACTACAAGGGGTAAAGTAGTGAGAAGAGATGGTAAGGTGGCGCCGCTGGATCTGCTGCAATTGTCAAGTGAACGAGTCTGATCAGCTTGAAAATGGACATGCCAAGGTCCTGACTAGTAATGCAGATGGAGTGACAAAGGGTTTGAAAGATTCTGCTACTTGAAAAAGCTCAGCCACAAAATTCGGCTCTCACTATCAATATTCCTGTTCTATCCTTGGACGAACTAGTAGAAAAGACAGATGATTTTGGCTCAAGTGCTTTGATAGGCGAAGGTTCTTATGGTAGAGTGTACTACGCTGTTCTTGACAGTGGAACAAAAATTGCAGTGAAGAAACTTGATTCTAATGAAAATGAGCCCACTTCAGAATTCTTGACCCAGG ] [-] EMBL CB649041 [ ACAACCTGGTCCAGCACTTGATTGGATGCAACGAGTAAGAATAGCTGTTGATGCTGCCAAAGGACTTGAATATCTACATGAGAAGGTTCAGCCCTCCATCGTTCATAGGGATATTAGATCAAGTAACATACTCTTATTTGAAGACTTCAAGGCAAAAGTTGCAGACTTCAATCTCTCAAATCAGGCTCCAGATATGGCTGCTCGTCTGCATTGTACTCGTGTACTGGGAACCTTTGGTTATCATGCTCCAGAGTATGCAATGACCGGTCAGCTGACACAGAAAAGTGATGTGTATAGCTTCGGAGTTGTTCTCTTGGAACTTCTGCCAGGAAGAAAACCAGTAGATCATACAATGCCTAGAGGGCAGCAGAGCTTGGTTACAT GGGCTACACCAAGATTAACTGAAGATAAGGTGAAGCA GTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTGCCAAGCTTGCAGCGGTTGCAGCATTGTGCGTACAATATGAAGCTGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCACTGCTCACAAGTAAGCTGACTCCACCCGCGCCTCCACCAGCTTTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATACCACCTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAAGGGCATGGAGAATGTGTTTTGCCTTTTGATGGACCAtaaaaagg ] [-] EMBL CA763068 [ AGC TGGTACCATGGGGTTCCCCCAAGGTTAACTGAAGATAAGGTGAACCAGGTGTATAGATCCACGGTTGAATGGTGAATACCCACCAAAAGGAGTTTCCAAGCTTGCACCGGTGGCACCCTTGTGCGTACAATACGAAGACGAGTTTCGCCCAAACATGAGCATTGTGGTGAAGGCTTTATCTCCCCTGCTCACAAGTAAGCCGACTCCACCCGCGCCTCCACCAGCTCTGGACGGTTGATGTCCAGAATCATCAGAGAAGAAATAGCAACTAAGCCCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATAGCATACCCCAGAAGGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACCCGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTTTGGGCCAACCATTGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTTGTAGTCGTTTATTCAATAAACAAGAGCTGATGTACTGCTGAATATTGATGATGTTCGTTGATTCAAATAGTGTCGCTGTTACTTGTGTTAAAAAAAAAAAAAAAAAAA] [+] EMBL AU184280 [ ATCATCAGAGAAGAAATAACAACTAAGACCATATAAGCTTCTAAGGGTCAGGGACTATTGTTTTTCCTGCTTGGTCATTTTGCATGGCATACCACAGAATGGAGCTACTTGCTTATTGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTACTTGTGTTGCTTTAAAAAAAAA ] [+] EMBL AU057870 [ ggnnGCTTCTCGGAATTCAGGCTAACTGCATGGAGAATGTGTTTTGCCTTTTGAAGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATAGTATCGCTGTTA AAAAAAAAAAA ] [+] EMBL AU057394 [ GGAATTCAGGCTAACTGCATGGNGAATGTGTTTTGCCTTTTGANGGAACACGATCCGAGCACAATAACATACTTAATTTTTGCAGACGGTGTCTAACAATCGGGATTGCATTGCATATACTGTCATTCTGGGCCAACCATAGGATTTGCAAGTATTTAGGTGCCTGTTTACAGAAGATTAGACGATGGCTTGTGTTCTAGTAGTCGTTTATTCAGTGAACTAGAGATGATGTACTGCTGAATACTGATGATGTTCTTTGATTCAAATNGTATCGCTGTTA AAAAAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||