These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1898 fasta sequence [CAGCTCCCCAAACAGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCTTGACTCTCTTTCGCTGTGCCTGTGAGCAACGCTGTTCTCCTCCCTCCGGCCTCCGGCCTCCGCTCTCCGCCTCGCCTCGCCGCCCGATCCGCGCGTGCCTTCTCCTCCTCCCCCTTCGTTGCGTGCTCGGCCTCCGCACCCACCCTCCGCTTCGATCAGCCGCAGCCCGACTCCCCCCTGCTTCCCCGCCTACTCCGCGCCGCCCGCCTTTGGCGCTCGCCGCCGCGGTCGCCCCCTTCCGCGGCTCGTCGCTGGGTTCTCGTCCAGCACGCGGGTGCCGGTTGCTTCTTCTTCTTCCTCCTCATCCGGTCGCCGCGTCACCAGGGTTAGTGCATGGCAGTGACACCGCATCATCGGCTATATGAATTTGCTAAGACTGCCCTTATCAAGATTTTCGCATTCCCTTATGCCACGGTCTGTGACCTGTATTGTGATGGTGGGGTTGATACAGACAAGTGGGGCGATGCACAAATTGGTCACTACATAGGGATTGATGCCTCTGCATCAGGTGTCAATGATGCTCGTGAGCTGTGGGAGAGCAGAAAGAAACTTTTCACGTCTGAGTTCATCGAGTTAGATCCTTCTGCTGATGACTTTGAAGCTCAAATGCAAGAAAAGGGCATCCAAGCAGATATAGTTTGTTGTATGCAGCATTTGCAGTTATGTTTCGAGAGTGAGGTACATGCTCAAAAGCTTCTGAATAATGTATCATCTTTACTCAAACCTGGAGGCTATTTTGTTGGCATAATTCCTGATTCATCTACAATATGGACAAAATATCAAAAGAATGTCGAGGCTTCACATAATAAGGGTCTGAAGACTGTTCCAAATAGCATTCGCTCAGAGAACTATGTCATCACCTTTGAAGTTGAGGAAGAAAAGTTTCCTTTCTTTGGAAAAAAGTACCAACTCAAATTTGCAAATGAATCAATGTTCGAGAATCACTGCCTGGTCCACTTTCCCAGCTTTATGAGATTAGCAAGGGAGGCAGGACTTGAATATGTAGAGATCCAGAATTTAACCGAGTTTTACGATGATAACAGAACTCAGTTTGCTCCATTGCTTGGTGGTTATGGTTCCAGTTTGGTGGATCCGCGTGGAAAGCTTGTCGCTCGTTCGTTTGATATTTTAGGCTTGTATTCAACTTTTGTTTTCCAGAAGCCTGA-CCCAGATGCAATGCCACCAATTGTAA-CACCCGAATTGCATGATCCTGAGAATGATCAAGAAGAGGAATGGCTCTGGACGCAGCAGGCATCAATGGACGATGGAAGGGTCTCACGTACTGATATACTTCCTCCTGCGGATAATGAGAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAA-GTTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGAT-GCTCACGTAGTTTCTAAATTTATTTAGGCTCTACCTGTAAAAAGAAAACCTTTCAGTTATTCTTGAGAAGATAGAATTAGCACCAATGTCATATGTCACGGTAGAAGATATTGATAGAGTAGTTCACTAATTTTGTAGTGGATCCTTTAAATATTACTCCCTTTGTCCTATAATATAGCAACCTAATACTAGATGAGACATTGAAATGTTACAATGAATCTAGATAACCTCCTGTCCAGATTCGGTGTATCATGAAATGTCCAATCCGGTATTAGATTATTATATTATGGGATGGAGGGAGTACATCATTACCCGTTTACGACTGACTCAGTACCGACTGTCTTTTCTTTTGCATGATGTGGTAACAAACCATCGCGAATCAAAAAAAA] [+] EMBL AK121526 [CAGCTCCCCAAACAGCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCTTGACTCTCTTTCGCTGTGCCTGTGAGCAACGCTGTTCTCCTCCCTCCGGCCTCCGGCCTCCGCTCTCCGCCTCGCCTCGCCGCCCGATCCGCGCGTGCCTTCTCCTCCTCCCCCTTCGTTGCGTGCTCGGCCTCCGCACCCACCCTCCGCTTCGATCAGCCGCAGCCCGACTCCCCCCTGCTTCCCCGCCTACTCCGCGCCGCCCGCCTTTGGCGCTCGCCGCCGCGGTCGCCCCCTTCCGCGGCTCGTCGCTGGGTTCTCGTCCAGCACGCGGGTGCCGGTTGCTTCTTCTTCTTCCTCCTCATCCGGTCGCCGCGTCACCAGGGTTAGTGCATGGCAGTGACACCGCATCATCGGCTATATGAATTTGCTAAGACTGCCCTTATCAAGATTTTCGCATTCCCTTATGCCACGGTCTGTGACCTGTATTGTGATGGTGGGGTTGATACAGACAAGTGGGGCGATGCACAAATTGGTCACTACATAGGGATTGATGCCTCTGCATCAGGTGTCAATGATGCTCGTGAGCTGTGGGAGAGCAGAAAGAAACTTTTCACGTCTGAGTTCATCGAGTTAGATCCTTCTGCTGATGACTTTGAAGCTCAAATGCAAGAAAAGGGCATCCAAGCAGATATAGTTTGTTGTATGCAGCATTTGCAGTTATGTTTCGAGAGTGAGGTACATGCTCAAAAGCTTCTGAATAATGTATCATCTTTACTCAAACCTGGAGGCTATTTTGTTGGCATAATTCCTGATTCATCTACAATATGGACAAAATATCAAAAGAATGTCGAGGCTTCACATAATAAGGGTCTGAAGACTGTTCCAAATAGCATTCGCTCAGAGAACTATGTCATCACCTTTGAAGTTGAGGAAGAAAAGTTTCCTTTCTTTGGAAAAAAGTACCAACTCAAATTTGCAAATGAATCAATGTTCGAGAATCACTGCCTGGTCCACTTTCCCAGCTTTATGAGATTAGCAAGGGAGGCAGGACTTGAATATGTAGAGATCCAGAATTTAACCGAGTTTTACGATGATAACAGAACTCAGTTTGCTCCATTGCTTGGTGGTTATGGTTCCAGTTTGGTGGATCCGCGTGGAAAGCTTGTCGCTCGTTCGTTTGATATTTTAGGCTTGTATTCAACTTTTGTTTTCCAGAAGCCTGA CCCAGATGCAATGCCACCAATTGTAA CACCCGAATTGCATGATCCTGAGAATGATCAAGAAGAGGAATGGCTCTGGACGCAGCAGGCATCAATGGACGATGGAAGGGTCTCACGTACTGATATACTTCCTCCTGCGGATAATGAGAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAA GTTCGCTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGAT GCTCACGTAGTTTCTAAATTTATTTAGGCTCTACCTGTAAAAAGAAAACCTTTCAGTTATTCTTGAGAAGATAGAATTAGCACCAATGTCATATGTCACGGTAGAAGATATTGATAGAGTAGTTCACTAATTTTGTAGTGGATCCTTTAAATATTACTCCCTTTGTCCTATAATATAGCAACCTAATACTAGATGAGACATTGAAATGTTACAATGAATCTAGATAACCTCCTGTCCAGATTCGGTGTATCATGAAATGTCCAATCCGGTATTAGATTATTATATTATGGGATGGAGGGAGTACATCATTACCCGTTTA ] [+] EMBL C98519 [ TCTCTCTCTCTCTCTGACTCTTGACTCTCTTTCGCTGTGCCTGTAAGCAACGCTGTTCTCCTCCCTCCGGCCTCCGG CTCCGCTCTCCGCCTCGCCTCGCCGCCCGATCCGCGCGTGCCTTCTCCTCCTCCCCCTTCGTTGCGTGCTCGGCCTCCGCACCCACCCTCCGCTTCGATCAGCCGCAGCCCGACTCCCCCCTGCTTCCCCGCCTACTCCGCGCCGCCCGCCTTTGG GCTCGCNGCCGCGGTCGCCCCCTTNCGCGGCTCGTCGCTGGGTT ] [+] EMBL AK067608 [ CTCTCTGACTCTTGACTCTCTTTCGCTGTGCCTGTGAGCAACGCTGTTCTCCTCCCTCCGGCCTCCGGCCTCCGCTCTCCGCCTCGCCTCGCCGCCCGATCCGCGCGTGCCTTCTCCTCCTCCCCCTTCGTTGCGTGCTCGGCCTCCGCACCCACCCTCCGCTTCGATCAGCCGCAGCCCGACTCCCCCCTGCTTCCCCGCCTACTCCGCGCCGCCCGCCTTTGGCGCTCGCCGCCGCGGTCGCCCCCTTCCGCGGCTCGTCGCTGGGTTCTCGTCCAGCACGCGGGTGCCGGTTGCTTCTTCTTCTTCCTCCTCATCCGGTCGCCGCGTCACCAGGGTTAGTGCATGGCAGTGACACCGCATCATCGGCTATATGAATTTGCTAAGACTGCCCTTATCAAGATTTTCGCATTCCCTTATGCCACGGTCTGTGACCTGTATTGTGATGGTGGGGTTGATACAGACAAGTGGGGCGATGCACAAATTGGTCACTACATAGGGATTGATGCCTCTGCATCAGGTGTCAATGATGCTCGTGAGCTGTGGGAGAGCAGAAAGAAACTTTTCACGTCTGAGTTCATCGAGTTAGATCCTTCTGCTGATGACTTTGAAGCTCAAATGCAAGAAAAGGGCATCCAAGCAGATATAGTTTGTTGTATGCAGCATTTGCAGTTATGTTTCGAGAGTGAGGAACATGCTCAAAAGCTTCTGAATAATGTATCATCTTTACTCAAACCTGGAGGCTATTTTGTTGGCATAATTCCTGATTCATCTACAATATGGACAAAATATCAAAAGAATGTCGAGGCTTCACATAATAAGGGTCTGAAGACTGTTCCAAATAGCATTCGCTCAGAGAACTATGTCATCACCTTTGAAGTTGAGGAAGAAAAGTTTCCTTTCTTTGGAAAAAAGTACCAACTCAAATTTGCAAATGAATCAATGTTCGAGAATCACTGCCTGGTCCACTTTCCCAGCTTTATGAGATTAGCAAGGGAGGCAGGACTTGAATATGTAGAGATCCAGAATTTAACCGAGTTTTACGATGATAACAGAACTCAGTTTGCTCCATTGCTTGGTGGTTATGGTTCCAGTTTGGTGGATCCGCGTGGAAAGCTTGTCGCTCGTTCGTTTGATATTTTAGGCTTGTATTCAACTTTTGTTTTCCAGAAGCCTGA CCCAGATGCAATGCCACCAATTGTAA CACCCGAATTACATGATCCTGAGAATGATCAAGAAGAGGAATGGCTCTGGACGCAGCAGGCATCAATGGACGATGGAAGGGTCTCACGTACTGATATACTTCCTCCTGCGGATAATGAGAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAA GTTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGAT GCTCACGTAGTTTCTAAATTTATTTAGGCTCTACCTGTAAAAAGAAAACCTTTCAGTTATTCTTGAGAAGATAG ] [+] EMBL AU081258 [ GTTTCCTTTCTTTGGAAAAAAGTACCAACTCAAATTTGCAAATGAATCAATGTTCGAGAATCACTGCCTGGTCCACTTTCCCAGCTTTATGAGATTAGCAAGGGAGGCAGGACTTGAATATGTAGAGATCCAGAATTTAACCGAGTTTTACGATGATAACAGAACTCAGTTTGCTCCATTGCTTGGTGGTTATGGTTCCAGTTTGGTGGATCCGCGTGGAAAGCTTGTCGCTCGTTCGTTTGATATTTTAGGCTTGTATTCAACTTTTGTTTTCCAGAAGCCTGA CCCAGATGCAATGCCACCAATTGTAA CACCCGAATTGCATGATCCTGAGAATGATCAAGAAGAGGAATGGCTCTGGACGCAGCAGGCATCAATGGACGATGGAAGGGTCTCACGT ] [+] EMBL AU081259 [ CCAGAAGCCTGACCCCAGATNCAATGCCACCAATTGTAACCCCCCGAAATGCATGATCCTGAGAATGATCAAGAAGAGGAATGCCTCTGGACGCAGCAGNCATCAATGGCCGATGGAAGGGTCTCACGTACTGATATACTTCCT CTGCGGATAATGAGAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAA GTTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACNATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGAT GCTCACGTAGTTTCTAAATTTATTTAGGCTCTACCTGTAAAAAGAAAACCTTTCAGTTATTCTTGAGAAGATAGAATTAGCACCAATGTCATATGTCACGGTAGAAGATATTGATAGAGTAGTTCACTAATTTTGTAGTGGATCCTTTAAATATTACTCCCTTTGTCCTATAATATAGCAACCTAATACTAGATGAGACATTGAAATGTTACAATGAATCTAGATAACCTCCTGTCCAGATTCGGTGTATCATGAAATGTCCAATCCGGTATTAGATTATTATATTATGGGATGGAGGGAGTACATCATTACCCGTTTACGACTGACTCAGTACCGACTGTCTTTTCTTTTGCATGATGTGGTAACAAACCATCGCGAATCAAAAAAAA] [+] EMBL AA751148 [ CAGCAGGCATCAATGGACGATGGAAGGGTCTCACGTACTGATATACTTCCTCCTGCGGATAATGAGAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAACGTTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCT CTGC AAGCTGCAATT GTG TTATCGACCGATACATATGCATGAT CGTCACGTAG TCTAA TTAT ] [+] EMBL AA750225 [ GAAAGGCATCCTTGGTCCTGGACCTGCAGATATGAGGCTTTAA NSTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGAT GCTCACGTAGTTTCTAAATTTATTTAGGCTCTA ] [+] EMBL C98520 [ CTGGCCCTGCAGATATGAGGCTTTAA GTTCACTGAACAACTGGATATAGGCTCACTGCTGGAGTTGGAGCAACGATGCTCCTGCAAAGCTGCAATTGGTGGTTTATGGATGCATACATATGCATGATGGCTCACGTAGTTTCTAAATTTATTTAGGCTCTACCTGTAAAAAGAAAACCTTTCAGTTATTCTTGAGAAGATAGAATTAGCACCAATGTCATATGTCACGGTAGAAGATATTGATAGAGTAGTTCACTAATTTTGTAGTGGATCCTTTAAATATTACTCCCTTTGTCCTATAATATAGCAACCTAATACTAGATGAGACATTGAAATGTTACAATGAATCTAGATAACCTCCTGTCCAGATTCGGTGTATCATGAAATGTCCAATCCGGTATTAGATTATTATATTATGGGATGGAGGGAGTACATCATTACCCGTTTACGACTGACTCAGTACCGACTGTCTTTTCTTTTGCATGATGTGGTAACAAAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||