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Oryza sativa
cluster # 11349 cluster # 11349       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11349#0 length = 1731 sequences # 7  
consensus_11349#1 length = 592 sequences # 1  

consensusID : consensus_11349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1731
fasta sequence
                              [TTCTTCTTCTTCCCCCCATTTCTCACTTACTCCGGCGATCACCGTGGTTGAGCGTCGGCGGCGGAGGAGGAGGCGATGATTACCATGGATCTGATGGGTGGGTACGGGCGGGTGGACGAGCAGGTGGCCATCCAGGAGGCGGCGGCGGCGGGGCTAAGGGGGATGGAGCATCTTATTCTGCAGCTGTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCGCCGGCGCAGGAGCAGCAGCAACAGGTGGACTGCAGGGAGATCACGGACATGACGGTGTCCAAGTTCAAGAAGGTGATCTCCATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGGGCCCGGTGGTGGCGCAGTCGTCGGGCCCGGCGGCGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCCATGACGCTCGACTTCACCAAGGCGGCGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTCTCCGGCATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTGTCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTTCCCCCGCCGCCGGCGACCAGCTGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCCATGTCAGCCGGCGCAGGCCACAAGCGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTACGGATCCACCGGCGGCCGCTGCCACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTGCCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTACGGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTGCGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATCGTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCGGCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCAATTCGGGCTGGGGAGAGCCCTCTGGGGGGGGCTCGGTGGCCCTTTTCTTCCCAACGGTGGCGGCTGATTACAACCCTGTCCGTGGCCCGATCTTATTCCGCCTTGTAGCCACGGCCAAACTTCCGGGCAGTTGACCGCACTATTTCAGCAGGGCGNGCACAGACCGCATTTAGCCAGGGAGGGTGAACAACCTGAAAAGGCCCAATGCGGAAGCGCCCTTGCAAAAGGTATAGGAAACCTGAAAGGGTGAAGGTGTAATACCCCCCAGGGGGGCGGCATACAATTGCCGGGAGCCCGAGGGGCTTACCCTTTACGGTGACTTCCCATCCTTGTCCGGTCTCTATACGCCGGTTTCTCTTTCGCTTAGCTTCCGACTNGTCTGGCGCCCATTTAGGGTGTGGTTTCTAGTGTTTTTTCGTACATTGGGACCCCCTATAAGGTGCT]

[+] EMBL AK100954             [TTCTTCTTCTTCCCCCCATTTCTCACTTACTCCGGCGATCACCGTGGTTGAGCGTCGGCGGCGGAGGAGGAGGCGATGATTACCATGGATCTGATGGGTGGGTACGGGCGGGTGGACGAGCAGGTGGCCATCCAGGAGGCGGCGGCGGCGGGGCTAAGGGGGATGGAGCATCTTATTCTGCAGCTGTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCGCCGGCGCAGGAGCAGCAGCAACAGGTGGACTGCAGGGAGATCACGGACATGACGGTGTCCAAGTTCAAGAAGGTGATCTCCATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGGGCCCGGTGGTGGCGCAGTCGTCGGGCCCGGCGGCGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCCATGACGCTCGACTTCACCAAGGCGGCGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTCTCCGGCATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTGTCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTTCCCCCGCCGCCGGCGACCAGCTGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCCATGTCAGCCGGCGCAGGCCACAAGCGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTACGGATCCACCGGCGGCCGCTGCCACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTGCCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTACGGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTGCGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATCGTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCGGCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK121494             [TTCTTCTTCTTCCCCCCATTTCTCACTTACTCCGGCGATCACCGTGGTTGAGCGTCTGCGGCGGAGGAGGAGGCG GNAGGGCCATGGATCTGATGGGTGGGTACGGGCGGGTGGACGAGCAGGTGGCCATCCAGGAGGCGGCGGCGGCGGGGCTAAGGGGGATGGAGCATCTTATTCTGCAGCTGTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCGCCGGCGCAGGAGCAGCAGCAACAGGTGGACTGCAGGGAGATCACGGACATGACGGTGTCCAAGTTCAAGAAGGTGATCTCCATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGGGCCCGGTGGTGGCGCAGTCGTCGGGCCCGGCGGCGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCCATGACGCTCGACTTCACCAAGGCGGCGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTCTCCGGCATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTGTCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTTCCCCCGCCGCCGGCGACCAGCTGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCCATGTCAGCCGGCGCAGGCCACAAGCGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTACGGATCCACCGGCGGCCGCTGCCACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTGCCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTACGGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTGCGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATCGTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCGGCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C27643               [                                CGGCGATCACCGTGGTTGAGCGTCGGCGACGGAGGAGGAGGCGATGATTACCATGGATCTNATGGGTGGNTACGGGCGGGTGGACGAGCAGGTGGCCATCCAGGAGGCNGCGGCNGCGGGGCTAAGGGGGATGGAGCATCTTATTCTGCAGCTNTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCNCCGNC ANGGAGCAGCAGCAACAGGTGGACTGCAGGGAGATCACGGACATGACGGTNTCCAAGTTCAAGAAGGTGATCTCCATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU160920             [                                                                                                                                                                                                                                                                                                                                                                         GCCCGGCGGTGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCCATGACGCTCGACTTCACCAAGGCGGNGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTCTCCGGNATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTGTCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTT CCCCGCCGCCNGCGACCAGCTGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCNATGTCAGCCGGNGCAGGCNACAAGCGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU091920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTGCCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTACGGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTGCGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATCGTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCGGCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTC TTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C99494               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGAAGAGTGNGAATTAGCTTGTCGGTCATCATAATTNCCGTTAGAAATTATTTTTTTCGTTTTTCTCTC TTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTNGCGTGTAAAACAATTTTNGGNGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CA754665             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAACCCAATTCGGGCTGGGGAGAGCCCTCTGGGGGGGGCTCGGTGGCCCTTTTCTTCCCAACGGTGGCGGCTGATTACAACCCTGTCCGTGGCCCGATCTTATTCCGCCTTGTAGCCACGGCCAAACTTCCGGGCAGTTGACCGCACTATTTCAGCAGGGCGNGCACAGACCGCATTTAGCCAGGGAGGGTGAACAACCTGAAAAGGCCCAATGCGGAAGCGCCCTTGCAAAAGGTATAGGAAACCTGAAAGGGTGAAGGTGTAATACCCCCCAGGGGGGCGGCATACAATTGCCGGGAGCCCGAGGGGCTTACCCTTTACGGTGACTTCCCATCCTTGTCCGGTCTCTATACGCCGGTTTCTCTTTCGCTTAGCTTCCGACTNGTCTGGCGCCCATTTAGGGTGTGGTTTCTAGTGTTTTTTCGTACATTGGGACCCCCTATAAGGTGCT]


>consensus_11349#0 TTCTTCTTCTTCCCCCCATTTCTCACTTACTCCGGCGATCACCGTGGTTGAGCGTCGGCG GCGGAGGAGGAGGCGATGATTACCATGGATCTGATGGGTGGGTACGGGCGGGTGGACGAG CAGGTGGCCATCCAGGAGGCGGCGGCGGCGGGGCTAAGGGGGATGGAGCATCTTATTCTG CAGCTGTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCGCCGGCGCAGGAGCAGCAGCAA CAGGTGGACTGCAGGGAGATCACGGACATGACGGTGTCCAAGTTCAAGAAGGTGATCTCC ATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGGGCCCGGTGGTGGCGCAGTCGTCG GGCCCGGCGGCGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCC ATGACGCTCGACTTCACCAAGGCGGCGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTC TCCGGCATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTG TCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTTCCCCCGCCGCCGGCGACCAGC TGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCCATGTCAGCCGGCGCAGGCCACAAG CGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTACGGATCCACC GGCGGCCGCTGCCACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTG CCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTAC GGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTG CGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATC GTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCG GCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGA GAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCT TTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGA CTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAACCCAATTCGGGCTGGGGAGAGCCCTCTGGGGGGGGCT CGGTGGCCCTTTTCTTCCCAACGGTGGCGGCTGATTACAACCCTGTCCGTGGCCCGATCT TATTCCGCCTTGTAGCCACGGCCAAACTTCCGGGCAGTTGACCGCACTATTTCAGCAGGG CGNGCACAGACCGCATTTAGCCAGGGAGGGTGAACAACCTGAAAAGGCCCAATGCGGAAG CGCCCTTGCAAAAGGTATAGGAAACCTGAAAGGGTGAAGGTGTAATACCCCCCAGGGGGG CGGCATACAATTGCCGGGAGCCCGAGGGGCTTACCCTTTACGGTGACTTCCCATCCTTGT CCGGTCTCTATACGCCGGTTTCTCTTTCGCTTAGCTTCCGACTNGTCTGGCGCCCATTTA GGGTGTGGTTTCTAGTGTTTTTTCGTACATTGGGACCCCCTATAAGGTGCT



consensusID : consensus_11349#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 592
fasta sequence
                              [AGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACNNAAAAAAAAAAAAAAAAAAAATCAAGGAAAAAAACCGAAACCCAATTCGCCCTAAGGGGAGCCCTCTTACGGGGGCTCGGTGGCCTTTGCTCCCATACGTGGGCGTGATTACACCCTGCCGTGCCCGTCTTATTAGCCTTGTAGGAGGTGAACTTTCGGGAGTTGCCGAATTAACTCGCAGGGCGGCAAATGACGCTTTTGCCAGGTGGGGATAAACCTGAAAGGCCCATGGCAATCGCCCTGCAAAATGGTAGTAACCCTGAAGGGTGAGGGGAATACCCCCTGGGTGGGGGGGTTAACTTGGCGGGGGCCGGGGGGCCTTCCCCTTTCCCTGACCTCCCCCCCTGTCGGCGGCCTTTACGCCCGTTCTCTCCGCTTATCTCCGATTTTTTCGCGCCCGTTTAGGATGGTTTTCACCT]

[+] EMBL CA754713             [AGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACNNAAAAAAAAAAAAAAAAAAAATCAAGGAAAAAAACCGAAACCCAATTCGCCCTAAGGGGAGCCCTCTTACGGGGGCTCGGTGGCCTTTGCTCCCATACGTGGGCGTGATTACACCCTGCCGTGCCCGTCTTATTAGCCTTGTAGGAGGTGAACTTTCGGGAGTTGCCGAATTAACTCGCAGGGCGGCAAATGACGCTTTTGCCAGGTGGGGATAAACCTGAAAGGCCCATGGCAATCGCCCTGCAAAATGGTAGTAACCCTGAAGGGTGAGGGGAATACCCCCTGGGTGGGGGGGTTAACTTGGCGGGGGCCGGGGGGCCTTCCCCTTTCCCTGACCTCCCCCCCTGTCGGCGGCCTTTACGCCCGTTCTCTCCGCTTATCTCCGATTTTTTCGCGCCCGTTTAGGATGGTTTTCACCT]


>consensus_11349#1 AGAAGAGTGAGAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGT TTTTCTCTCTTTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAA TTTTAGGAGACTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACNNAAAAAA AAAAAAAAAAAAAATCAAGGAAAAAAACCGAAACCCAATTCGCCCTAAGGGGAGCCCTCT TACGGGGGCTCGGTGGCCTTTGCTCCCATACGTGGGCGTGATTACACCCTGCCGTGCCCG TCTTATTAGCCTTGTAGGAGGTGAACTTTCGGGAGTTGCCGAATTAACTCGCAGGGCGGC AAATGACGCTTTTGCCAGGTGGGGATAAACCTGAAAGGCCCATGGCAATCGCCCTGCAAA ATGGTAGTAACCCTGAAGGGTGAGGGGAATACCCCCTGGGTGGGGGGGTTAACTTGGCGG GGGCCGGGGGGCCTTCCCCTTTCCCTGACCTCCCCCCCTGTCGGCGGCCTTTACGCCCGT TCTCTCCGCTTATCTCCGATTTTTTCGCGCCCGTTTAGGATGGTTTTCACCT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11349#0      TTCTTCTTCTTCCCCCCATTTCTCACTTACTCCGGCGATCACCGTGGTTGAGCGTCGGCG 60
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GCGGAGGAGGAGGCGATGATTACCATGGATCTGATGGGTGGGTACGGGCGGGTGGACGAG 120
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CAGGTGGCCATCCAGGAGGCGGCGGCGGCGGGGCTAAGGGGGATGGAGCATCTTATTCTG 180
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CAGCTGTCCCAGACTGGGACGAGCGAGAGGTCGCCGGCGCCGGCGCAGGAGCAGCAGCAA 240
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CAGGTGGACTGCAGGGAGATCACGGACATGACGGTGTCCAAGTTCAAGAAGGTGATCTCC 300
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      ATGCTGAACCGCACCGGCCACGCGCGGTTCCGGCGGGGCCCGGTGGTGGCGCAGTCGTCG 360
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GGCCCGGCGGCGTCCGAGCCGGCGCCGGTGAGGTCGTCCCCGTCGGCGGTGTCGAGGCCC 420
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      ATGACGCTCGACTTCACCAAGGCGGCGTCCGGGTACGGCAAGGACGCCGGGTTCAGCGTC 480
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      TCCGGCATCTCCGCCGCGAGCTCGTCCTTCCTCTCGTCGGTCACCGGCGACGGCAGCGTG 540
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      TCCAACGGGCGCGGCGGCGGGTCATCCTCCCTGATGCTTCCCCCGCCGCCGGCGACCAGC 600
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      TGCGGCAAGCCACCGCTGTCCTCCGCCGCCGCCGCCATGTCAGCCGGCGCAGGCCACAAG 660
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CGCAAGTGCCACGACCACGCGCACTCCGAGAACGTCGCCGGCGGCAAGTACGGATCCACC 720
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GGCGGCCGCTGCCACTGCTCCAAGCGCCGGAAGCATCGGGTGAAGAGGACGATCCGCGTG 780
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CCGGCGATAAGCTCGAAGGTGGCGGACATCCCCGCCGACGACTTCTCGTGGCGGAAGTAC 840
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GGGCAGAAGCCCATCAAGGGCTCCCCCTTCCCACGAGGATACTACAAGTGTAGCACGCTG 900
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      CGCGGTTGCCCGGCGAGGAAGCACGTGGAGCGCGACCCGACCGACCCGTCCATGCTCATC 960
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GTCACCTACGAGGGCGAGCACCGCCACTCCCCCTCCGCCGCCGGCCAGGACCACCCGCCG 1020
consensus_11349#1      ------------------------------------------------------------
                                                                                   

consensus_11349#0      GCGCCGCCTCCGCCGCTGGCGCTGCCGCTCGCCTGAGATACCCCCGGTGAAGAAGAGTGA 1080
consensus_11349#1      --------------------------------------------------AGAAGAGTGA 10
                                                                         **********

consensus_11349#0      GAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCT 1140
consensus_11349#1      GAATTAGCTTGTCGGTCATCATAATTACCGTTAGAAATTATTTTTTTCGTTTTTCTCTCT 70
                       ************************************************************

consensus_11349#0      TTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGA 1200
consensus_11349#1      TTTTTTTTCTTTTTTTTACTGCATCATTGTAGAACTAGCGTGTAAAACAATTTTAGGAGA 130
                       ************************************************************

consensus_11349#0      CTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACAAAAAAAAAAAAAAAAAA 1260
consensus_11349#1      CTTTGAGACTGAGCTTTTACTGAAGAAAAAATAAAGCAGAACNNAAAAAAAAAAAAAAAA 190
                       ******************************************  ****************

consensus_11349#0      AAAAAAAAAAAAAAAAAAAAAAACCCAATTCGGGCTGGGGAGAGCCCTCTGGGGGGGGCT 1320
consensus_11349#1      AAAATCAAGGAAAAAAACCGAAACCCAATTCGCCCTAAGGGGAGCCCTCTTACGGGGGCT 250
                       ****  **  *******   ************  **  ** *********   *******

consensus_11349#0      CGGTGGCCCTTTTCTTCCCAACGGTGGCGGCTGATTACAACCCTGTCCGTGGCCCGATCT 1380
consensus_11349#1      CGGTGGCC-TTTGCTCCCATACGTGGGCG--TGATTACA-CCCTG-CCGTGCCC--GTCT 303
                       ******** *** ** **  ***  ****  ******** ***** ***** **   ***

consensus_11349#0      TATTCCGCCTTGTAGCCACGGCCAAACTTCCGGGCAGTTGACCGCACTATTTCAGCAGGG 1440
consensus_11349#1      TATTA-GCCTTGTAGG---AGGTGAACTTTCGGG-AGTTG-CCGAATTAACTC-GCAGGG 356
                       ****  *********     *   ***** **** ***** *** * **  ** ******

consensus_11349#0      CGNGCACAGACCGCATTTAGCCAGGGAGGGTGAACAACCTGAAAAGGCCCAATGCGGAAG 1500
consensus_11349#1      CGG-CAAATGACGC-TTTTGCCAGGTGGGG---ATAAACCTGAAAGGCCCATGGC--AAT 409
                       **  ** *   *** *** ******  ***   * ** *   *********  **  ** 

consensus_11349#0      CGCCCTTGCAAAAGGTATAGGAAACCTGAAAGGGTGAAGGTGTAATACCCCCCAGGGGGG 1560
consensus_11349#1      CGCCCT-GCAAAATG-GTAGTAACCCTGAA-GGGTGAGGGG--AATACCCCCTGGGTGGG 464
                       ****** ****** *  *** ** ****** ****** **   *********  ** ***

consensus_11349#0      CGGCATACAATTGCCGGGAGCCCGAGGGGCTTACCCTTTACGGTGACTTCCCATCCTTGT 1620
consensus_11349#1      GGGGTTA-ACTTGGCGGGGGCC-GGGGGGCCTTCCCCTTTCCCTGACCTCCC-CCCCTGT 521
                        **  ** * *** **** *** * ***** * *** ** *  **** ****  ** ***

consensus_11349#0      CCGGTCTCTATACGCCGGTTTCTCTTTCGCTTAGCTTCCGACTNGTCTGGCGCCCATTTA 1680
consensus_11349#1      CGGCGGCCTTTACGCCCGTTCTC--TCCGCTTATCT-CCGATTT-TTTCGCGCCCGTTTA 577
                       * *    ** ****** ***     * ****** ** **** *  * * ****** ****

consensus_11349#0      GGGTGTGGTTTCTAGTGTTTTTTCGTACATTGGGACCCCCTATAAGGTGCT 1731
consensus_11349#1      GGATG--GTTTTCACCT---------------------------------- 592
                       ** **  ****  *                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)