These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11387#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3444 fasta sequence [AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTGTGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGTTTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATACACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTTTTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTCCACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTGCTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGAGAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGAGGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCATCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTTCTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCTAACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTACTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATAGTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTATCAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAGTTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCAAACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTTTATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTGAAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCAAGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTATTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCCATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAAAAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAGTTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATCATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTATTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAATTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTTAGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGATGCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACCACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG-TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTCCCTTTACTTACC] [+] EMBL AK065594 [AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTGTGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGTTTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATACACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTTTTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTCCACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTGCTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGAGAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGAGGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCATCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTTCTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCTAACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTACTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATAGTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTATCAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAGTTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCAAACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTTTATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTGAAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCAAGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTATTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCCATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAAAAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAGTTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATCATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTATTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAATTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTTAGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGATGCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACCACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCT ] [+] EMBL CF312147 [ CAAGATTAATTATCTATCC CAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTTGCTTGAGGTTGTTTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGG ] [+] EMBL AK061427 [ AAGATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAAT ] [+] EMBL CB679885 [ GAAGAAGAAGAAGAAGAAGACTATCATCTTGAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCTCTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATCACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTGGCTTGAGGTTG TTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGTGCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGGTTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCCATCGGTGTCGGCGTGGTGAAAGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCAC ] [-] EMBL CB679886 [ GCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATA ] [-] EMBL CA760157 [ GAAGGACCCCAGAT TTCCT GGCGGCCGTGGCAAGCTGGGAAAAGGCGACTGGGGGGGCATTTCTGGGCACTTCGTCACTAGCCGGACTTCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACATCCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTTTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAAaaaaaaaa ] [-] EMBL CF312148 [ GTCCGTCGCCGAGCACGCCTTTTTTCGGGACCATCAGAGTTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTTTTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATCAGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCATATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGGGTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTCAGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTTTCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAATTAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTAGTACAAaaaa ] [+] EMBL CF329787 [ TACAGGTTGTGATCGATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTCCCTTTACTTACC] consensusID : consensus_11387#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [CGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGGTTTACTGAATATTTAAGTTGACTCTTAAAAGATCAGTTCAACATAGGAGTTGCTTGGCATTTCAACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG] [+] EMBL CA754768 [CGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATGGGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGGTTTACTGAATATTTAAGTTGACTCTTAAAAGATCAGTTCAACATAGGAGTTGCTTGGCATTTCAACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGACTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGCGGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCCAGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTGATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAACTGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTCCATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACATTGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11387#0 AAGAAGCTGGTCTGCTGGTGATGGCACCTGAATTATCATTAGTGTATGTTCATTCATCTG 60 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TGCTCAGGTACATATTATGCTTTGCCTTGAAGCGCAGAAGTAGGTAAAAAAAATCCTAGT 120 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTTTTTTTTTGAACGGAAAAAATATCCTAGTTAGAGCGATAGGCTGATTGTCAGGGCATA 180 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CACTACTTGGTTCTTGACTCTTTTTTTTTTCTTTGATGAATCCTAGTTTTGCTTTTATTT 240 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTAAGCCAAAATTTCACATCTGTAACGGCTCCATGTTCTAAGCTGCAACAGATGGGTCTC 300 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CACATTTGTAACTGTGGGTTGTAACGACTGCTCTAACCATTATAGATGTAGGGTTCTGTG 360 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CTAGTGTTCACTTGCAATACAATTGCAATTGCATTCCTGAAATCATATTTTCTTTTTAGA 420 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GAATGAAATGAAATTCATTTCAGCTTTTGTTTTAAGGAAACTACAACCAATTATTGAAGA 480 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GGTTGCAGGTTGAAGGACTCCGAATTCCCGTAATCAGCTAAAATTCAAAAAATATGGGCA 540 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TCCAAATCAGTCATAGGATTATTTGAACCAGGTGGGTAATTGGAATGTTCCTTTATTGTT 600 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CTTCTATCCTCATGCTTTTTCCCGAATGTGGACTAGGCAGAATAACACAGTATCTAACCT 660 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AACCGATTTGATACTGATCTACTGTCCATGGAGAAGGAATGTAAGGCATAGGTGCACTTA 720 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CTTTTGATGGTTCTGAATTTTCGTCCAGTCCAGGCATAAGTACTATTTTTGCTGGTCATA 780 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GTTGGTCAATACCTGGAATAGGTTTGGAAATTTCAGGTTTTCAAATAATAATTAGATTAT 840 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CAAGTAGCTTTGCAGACGATTTCCGGTCATATAAACAACTTGTTAAATTTTATTTATCAG 900 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTAAAAAACAAATATGGGTTTGAATTCACGAAAGCAATACAAACTTCTCACCCATTCCCA 960 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AACGGTCAGATTAGGTTGTCCAACAAACTCTAATTCTGTCCACTGATTTTTTTTTCAGTT 1020 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TATGTCTCAGTCTAATGTTTTATCAGCAGCTGACATCCTTGATGTAATCCTCTCTATTTG 1080 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AAACAGAGTTGCACCTCCACTTCCTATTTTCTAAATGAAAAATCTTTCTATGATTGGTCA 1140 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AGTGCTGTTGCTATTTCTCTGCTGATAAACATCAGTGATGAATCTTGATACTGACTCTTA 1200 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTTATTTTTTTCAAGAAACATCCAGAAAATAAATATATGTGCCCTGCTTCTCACTGTTCC 1260 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ATTATCATCCTAGAATAATCATACCCTCTCTCTTTCTCCAAATGATGGTCACTTTGATAA 1320 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AAAAAACAGGCCCCATATTTAACACATGCTTAACCTATAGCAACCTGATTGATTTACAAG 1380 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTTTTTTTCGGTCAATTTGTACGAAATACACGTTACCAAGGAGCATATCCTGTTACAATC 1440 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ATCTGACTCTCTGTGATTGAAACCTTGTCTCTGAAATGCTTGAGGGCACAGCAATAAGTA 1500 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTGAACAAATGTGTGATTCATGGATACATACGGTGTACTGAAAGTGACACCAAGCAAGAA 1560 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTAGTATCATGGGCTCCAAAGACACCTGTGCTCATTCTGTTGGTTCTCTACACATGTTTT 1620 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AGAATAAATAAATAAAATTAGGCCATATTTGCACTGAAATGTCTGCCATAGGGAGGTGAT 1680 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GCCAAGATGTCCATTTCATTCAGACAGGAGTGCTAGATGATTTCCCAAGTAGCCCCTACC 1740 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ACATTTTATTGCCCTCTTTATTAAGCCCTCTAGCTAGCTATAACACCTTACACACACCAA 1800 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GATTAATTATCTATCCACAGGGACAGAGAAGAAGAAGAAGAAGAAGAAGACTATCATCTT 1860 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GAGCTTATTCTTCCATTTGCTCCATCTTGAAATCATCAGTAACCATGGCTAGGAAGTGCT 1920 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 CTAGCTGTGGGAACAATGGCCACAACTCCAGGACTTGCAGTGGCCAAAGAGTTCTTGATC 1980 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ACAGCATCAGCAGCAGCAACAGTGGTAGTACTACTGCTGCTGCTGCTACTGCCTGTGGTG 2040 consensus_11387#1 --------------------------------------------------------CGTC 4 ** consensus_11387#0 GCTTGAGGTTGTTTGGGGTGCAGCTGCAGGTAGGAGGAGGCTCATCTCCTCTGAAGAAGT 2100 consensus_11387#1 ATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGG------TCTCC----AATGGGT 54 * * ****** * ** * * **** ***** ** ** consensus_11387#0 GCCTCAGCATGGAGTGCTTGGCATCACCAGCATACTATGGAGCTTCTGCCTCGCCGTCGG 2160 consensus_11387#1 ACCTCTCTGATGGGCTCATGGGA-----AGGGTTCAGGAGAGGAAGAAAGTTGCTTCAGG 109 **** * * * *** * ** * * *** * ** ** consensus_11387#0 TTTCGTCGTCGTCATCTTCGCTTGTTTCGATTGAGGAGAACACTGAGAGGGTCTCCAATG 2220 consensus_11387#1 TTTACTGAATATTTAAGTTGAC--TCTTAAAAGATCAGTTCAACATAGGAGTTGC---TT 164 *** * * * * * * * ** ** ** * ** * * consensus_11387#0 GGTACCTCTCTGATGGGCTCATGGGAAGGGTTCAGGAGAGGAAGAAAGGAGTTCCATGGA 2280 consensus_11387#1 GGCATTTC---AACAAGTGTATGATGATCTGTAACTTCTGAATCTCAGGAGTTCCATGGA 221 ** * ** * * *** * * * * * ************** consensus_11387#0 CTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGC 2340 consensus_11387#1 CTGAGGAAGAACACCAGATGTTCCTCGCCGGCCTTGACAAGCTCGGAAAAGGCGACTGGC 281 ************************************************************ consensus_11387#0 GGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCC 2400 consensus_11387#1 GGGGCATTTCTCGGCACTTCGTCACTACCCGGACTCCAACGCAGGTCGCCAGCCATGCCC 341 ************************************************************ consensus_11387#0 AGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTG 2460 consensus_11387#1 AGAAGTACTTCCTGAGGCAGAACAGTATGACACAGAAGAAGAGGAGGTCCAGCCTCTTTG 401 ************************************************************ consensus_11387#0 ATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAAC 2520 consensus_11387#1 ATGTGGTTGAAGGTATCAAGAGGGCAGCAGCAATGCCCATTTCAGGATCTGCATCTGAAC 461 ************************************************************ consensus_11387#0 TGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTC 2580 consensus_11387#1 TGCAGATCCCCGGCATGTCGATCGGTGTCGGCGTGGTGAAGGAGGAGGTTGTCCTGCCTC 521 ************************************************************ consensus_11387#0 CATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACAT 2640 consensus_11387#1 CATGTCTGAACCTGATGAGTAACAGTTCATCAGCATCACAGCACTCACCTTCCCTGACAT 581 ************************************************************ consensus_11387#0 TGCTGGCAAATCCTCAGGTGCAGCTCCAGATGCCTGACCTGGAGCTAAAGATGTCCACAT 2700 consensus_11387#1 TGCTGGCAAATCCTCANGTGCAGCTCCAGATGCCTGACCTGGAG---------------- 625 **************** *************************** consensus_11387#0 CCCGGTTATCTGACCAATCCGGTCCGTCGCCGAGCACGCCTTTCTTCGGGACCATCAGAG 2760 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTACCTGATCTTCATCTTCAGTGCTCCTCATAAAAGTGGAGGAGTTCAGAAAAGGGTGTT 2820 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TTGGAGATCATGTACCTCAATCAGAAAGTTAGGTGTTACTGTAATGTTAGAATGACAATC 2880 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AGTGATCAGCCCATGCACAAAATAAGATAAGAAAAGCAAAGAAGAAATGGTTTTTATCAT 2940 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ATCATACCATACTTTTGCAATCACCTTATAGCTTTATGTTGACACAAAGGCATGGCAAGG 3000 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GTGGTTGCTGGTTTGGATTTTCAGAGCCTGGAGAAGGTGAAAGATGAGCTCACAATATTC 3060 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AGTTTGCAGTGGGCAATGACAAGGACAGGCAAAAACCTCAGCTACCAAAAATTTCTTCTT 3120 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TCCTTTTATTCACTGCATACACACACATGATCATCTCCTTGTACAGCACATGAGGTTAAT 3180 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 TAGCTATGCATGCATGCATGGAACCAATTACAAAAATGTCTAAATTAATTGGTTTTTCTA 3240 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 GTACAAGTTAATTTCTTTTCTCTTTTTCTGAAAGTGAGGTTCTTGTACAGGTTGTGATCG 3300 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ATGTTTACCTGTCGTTTGGTGTGCTGCCAATAAAGATCTATTAATCATTAATCCCAAAAA 3360 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3420 consensus_11387#1 ------------------------------------------------------------ consensus_11387#0 ACCCCTGTCTTCCCTTTACTTACC 3444 consensus_11387#1 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||