These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11395#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1104 fasta sequence [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAGGCTCTGATATGGCTTTGCATTAATACAAAAAAAAAATCCTTACAATGGTCAGTACTTAACATCTGCAAGCTATATTCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC-AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC-TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG-CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA-TCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAGATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAAGAAAAATGATGCAACAAAAAGATTCTTCTGCCCATCTCCTCCACCACCATT-CCACACACCA-CCAAATGTACATTTCATGT-GAGTGCATGCTGGTTCGTC-AACTTT-GAGAGCTCTCACAGCAACAGCCCTGCACTT-GGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCACCATATCTGTATTGTCCATGATGTCCTTCCAACATACAGTTGCGGTAATCATTGCCTTCACCTGCTTTTAAGATCTCTGCTCTAGCCGCCAGCAATCCATAACGCAAATAACTGTGAACATAAAGATAATATGTTGTTCCCTTAAGTAGAAGCTCCTTCACATATGAATCTTCACCTTCTGCAACTGGAGGAGCCTTTCCTGCATCCTTCTCTGAGATGGCATAAGCCATTTGGACAGAACCACCACCTAGATCAACCACTCCAACCGTGTGTGAGTAAGGCT] [+] EMBL CF324590 [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAGGCTTTGATATGGCTTTGCATTAATAC AAAAAAAAATCCTTACAATGGTCAGTACTTAACATTTGCAAGCTATTTTCCTCATGTGTACCTCAAGGTGTAGGCGGCCAAACAAATAAAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATTTGCTGAGACC ] [-] EMBL AU030805 [ TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAAGGCTCTGATATGGCTTTGCATTAATACAAAAAAAAAATCCTTACAATGGTCAGTACTTAACATCTGCAAGCTATATTCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCC CTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAGATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAA ] [-] EMBL AU097482 [ TTTTTTTTTTTTTTTTTTTGAAAAAAAGGCTCTGATATGGCTTTGCATTAATACAAAAAAAAAATCCTTACAATGGTCAGTACTTAACATCTGCAAGCTATATTCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTGACTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATATTCCTGGT ] [+] EMBL CB659454 [ CTCTGATATGGCTTTGCATTAATACAAAAAAAAAATCCTTACAATGGTCAGTACTTAACATCTGCAAGCTATATTCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAAAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAAATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAAGAAAAATGATGCAACAAAAAGATTCTTCTGCCCATCTCCTCCACCACCATT CCACACACCA CCAAATGTACATTTCATGT GAGTGCATGCTGGTTCGTC AACTTT GAGAGCTCTCACAGCAACAGCCCTGCACTT GGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCAC ] [+] EMBL CB651966 [ aAAGGGGCAGGACTTAACATCTGCAAGCTATATTCCCCTTTAAAACGTCAAGGGGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAGATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAAGAAAAATGATGCAACAAAAAGATTCTTCTGCCCATCTCCTCCACCACCATT CCACACACCA CCAAATGTACATTTCATGT GAGTGCATGCTGGTTCGTC AACTTT GAGAGCTCTCACAGCAACAGCCCTGCACTT GGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCACCATATCTGTATTGTCCATGATGTCCTTCCAACATACAGTTGCGGTAATCATTGCCTTCACCTGCTTTTAAGATCTCTGCTCTAGCCGCCAGCAATCCA ] [-] EMBL OSC0971 [ GGTCAGTACTTAACATCTGCAAGCTATATTCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCA ] [+] EMBL CB651937 [ CTTAACATCTGCAAGCTATATCCCTCATGTGTACGTCAAGGTGTAGGCGGCCAAACAAATAGAATCGAAAATGGACAAC AAATGGTGAATCAAGTAAAAAAAGAATCTAACCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAAC TATATGCTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCACACCAAATCCATCCACAAGTAACGTGTACTGGTAGACTAGATCCATGCAAAGGTATGGAACGTTCTCCTCTGAAACATCCGGGTAGGTGGCCTGTGCATCCTTCACATTCAGTTTACAAACACGTCGTGCAGCTTCTTCGAAGTCTGAGGGTTTAACCTTAGCAAATGGTGCCTTCGGGTTTACAAAACCGGCCTCAGCAGCCCGATCGAAGAAAAATGATGCAACAAAAAGATTCTTCTGCCCATCTCCTCCACCACCATT CCACACACCA CCAAATGTACATTTCATGT GAGTGCATGCTGGTTCGTC AACTTT GAGAGCTCTCACAGCAACAGCCCTGCACTT GGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCACCATATCTGTATTGTCCATGATGTCCTTCCAACATACAGTTGCGGTAATCATTGCCTT ] [-] EMBL AF358764 [ GTAGGCGGCCAACCAAATAGAATCGAAAATGGACACCAAAATGGTG ATCAAGTAAAAAAAGAATCTACCCTCAAACATAGGATCTACACTCCCTACTAAGTCGGTGAACTAAGCCAAAACTTATATGTTGAGACCTTCCTTTCTTTCATAAGTTATAGCCAAGCTATTTCTG CTATGATGAAGATGCAACCTCAATGGCACTACCAAGGGGCCATGCTGCTTCAACAAATGAATTGCTATAAGGCACCTTCTTTACCAATGTAATA TCCTGGTAGGGATCCACACCAAATCCATCCACAA ] [-] EMBL AU095151 [ gcCCCATCTCCTCNACCACCATTCCCACACACCACCCAAATGTACATTNCATGTGGAGTGCATGCTGGTTCGTCAAACTTTGGAGAGCTCTCACAGCAACAGCCCTGCACTTGGGAATAACTTGCACCAGATGACAAACCTGATGCTTCGAATATATCGTCACCATATCTGTATTGTCCATGATGTCCTTCCAACATACAGTTGCGGTAATCATTGCCTTCACCTGCTTTTAAGATCTCTGCTCTAGCCGCCAGCAATCCATAACGCAAATAACTGTGAACATAAAGATAATATGTTGTTCCCTTAAGTAGAAGCTCCTTCACATATGAATCTTCACCTTCTGCAACTGGAGGAGCCTTTCCTGCATCCTTCTCTGAGATGGCATAAGCCATTTGGACAGAACCACCACCTAGATCAACCACTCCAACCGTGTGTGAGTAAGGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||