|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11407#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1746 fasta sequence
[TAGATAGAGGAGAGGGTGGGCGCGCAACAGCAATAAGCATTATATAGAGAGGGAGTGAGAGAGAGAGAGGTGGATTGATTTGAAGCAGAGCGCAGCAAGCATATAGTAGGTAGATATATATGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGGCCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGGAAGGCTCAGGCACCACGCCGACGATAAGCTTGTGCTCGACTGCAATGCCGAGGGCGCGCTCTTCGCCGAGGCCTTCCTGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGCCAAGCCGCACAAGTCCTGGAGGAAGCTGCTCTACAGAGTCCACGCCGCCACCTTCGTCGCCGTCCCGCCGCTCGTCGTCCAGGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACTGCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCCGCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCAGCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGACTGCATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTCCTCCTCGACCTCGACGACGACCAGCCCGCCGT-ACCCGTACTAGTGGACAAGCAGGACCACG-ACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGCTTTACAACTCAAATTTTGTCCAAAATACTTATTATCACTATGGAATGCCAATTATCATATAATCACTTTCTATTTCTATTGAGAAAATGTTTTTAACAGTTCGAGTGGACGTCCAAAAAAAAAA]
[+] EMBL AK121535 [TAGATAGAGGAGAGGGTGGGCGCGCAACAGCAATAAGCATTATATAGAGAGGGAGTGAGAGAGAGAGAGGTGGATTGATTTGAAGCAGAGCGCAGCAAGCATATAGTAGGTAGATATATATGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGGCCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGGAAGGCTCAGGCACCACGCCGACGATAAGCTTGTGCTCGACTGCAATGCCGAGGGCGCGCTCTTCGCCGAGGCCTTCCTGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGCCAAGCCGCACAAGTCCTGGAGGAAGCTGCTCTACAGAGTCCACGCCGCCACCTTCGTCGCCGTCCCGCCGCTCGTCGTCCAGGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACTGCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCCGCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCAGCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGACTGCATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTCCTCCTCGACCTCGACGACGACCAGCCCGCCGT ACCCGTACTAGTGGACAAGCAGGACCACG ACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGCTTTACAACTCAAATTTTGTCCAAAATACTTATTATCACTATGGAATGCCAATTATCATATAATCACTTTCT ]
[+] EMBL OSS12556A [ CATATAGTAGGTAGATATATATGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGNGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTNTACGTCTTCCCGCCCTCCGNCGCCGTGGCCGCCGACGNCCTCAGGGNCGCGCTCGCCAGGGNCCTCGTCCACTACT ]
[+] EMBL AU097227 [ ggaACGA ACCAGCCCGCCGTAACCCGTACTAGTGGACAAGCAGGACCACGNNCAACCAGTTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGCTTTACAACTCAAATTTTGTCCAAAATACTTATTATCACTATGGAATGCCAATTATCATATAATCACTTTCTATTTCTATTGAGAAAATGTTTTTAACAGTTCGAGTGGACGTCCAAAAAAAAAA]
consensusID : consensus_11407#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1128 fasta sequence
[GTCTACAGTGCAGTGCAGTACTCCCTCAGATTGATCGATCGATCAGATGGTGTCGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACTGCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCCGCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCAGCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGACTGCATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGT-CACCGTCCTGCTCT-CGTTGCCGCAACCCGCCGCCGAC-ACCTTCGAGCACCATTGCTGCAGCTGCTTC-CTCCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGC]
[+] EMBL AK071797 [GTCTACAGTGCAGTGCAGTACTCCCTCAGATTGATCGATCGATCAGATGGTGTCGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACTGCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAGCCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCCGCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCAGCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCTCCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCACCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGCCGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCAAGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCACGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGACTGCATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGT CACCGTCCTGCTCT CGTTGCCGCAACCCGCCGCCGAC ACCTTCGAGCACCATTGCTGCAGCTGCTTC CTCCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTACCTCCGTTCCAAAATACAATTATCTCTGC]
[+] EMBL AU088688 [ CGCCGTANACNGTCCTGCTCTNCGTTGCCGCAACCCGCCGCCGACAACCTTCGAGCACCATTGCTGCAGCTGCTTCACTCCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATCCCAAAATATAATAATTTTTACTAaa ]
consensusID : consensus_11407#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 603 fasta sequence
[TATAGTAGGTAGATATATATGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGGCCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGGAAGGCTCAG-GCACCACGCCGACGATAAGCTTGTGCTCGACTGCAATGCCGAGGGCGCGCTCTTCGCCGAGGCCTTCCTGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGCCNAGCCGCACAAGTCCTGGAGGAAGCTGCTCTACAGAGTCCACGCCGCCACCTTCGTCGCCGTCCCGCCGCTCGTCGTCCAGACAGTACAGTACATCGATCGAACTAGTGCGTGCTGGTTGAACTAGCTAGCATTGATATTCATCATCGCCGGCCCGCCCTATTGTACGTAGTACGATCAATACTCTACTATGTGGAGATAAGGGAGTAATTAAGGATAACTATTGATGGTATGATCA]
[+] EMBL CA755914 [TATAGTAGGTAGATATATATGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGGCCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGGAAGGCTCAG GCACCACGCCGACGATAAGCTTGTGCTCGACTGCAATGCCGAGGGCGCGCTCTTCGCCGAGGCCTTCCTGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGCCNAGCCGCACAAGTCCTGGAGGAAGCTGCTCTACAGAGTCCACGCCGCCACCTTCGTCGCCGTCCCGCCGCTCGTCGTCCAGACAGTACAGTACATCGATCGAACTAGTGCGTGCTGGTTGAACTAGCTAGCATTGATATTCATCATCGCCGGCCCGCCCTATTGTACGTAGTACGATCAATACTCTACTATGTGGAGATAAGGGAGTAATTAAGGATAACTATTGATGGTATGATCA]
[+] EMBL OSS2962A [ TCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTCCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGGCCGCGCTCGCNAGGGCCCTCGTCCACTACTACCCACTGGCCGGAA GNTCAGCNCACCACGCCGACG ]
consensusID : consensus_11407#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 571 fasta sequence
[GCCCCCCCCTCAACCGAGCTCCCTGACCTACTCCGCCAACGCTTCAGTGCTGCTGCCCGAGGCCACCCGACCGAGTCTGCGGCGGTCCCGGGTGCGGCTGGTGCAGGAGCCAAGGACTGCATCGACGACGACTACGTGCGATCCCCCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACAGTCGACTTCGGCAAGGGGAGGCGGCAGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCACTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCACTGCTCTCGTTCCGCAACCCCCTGCCGACACCTTCGAGCACCATTGCTGCACTGTCTTCCTCCTCGACCTCCGACGACGACCAGCCCGCCGTACCCGTACTATGACAACAGACCACACAACCAGCTCTGCTCCCATCATCAACATGACATCCTCGCCTATACTTCTTAATTAATCACTACTAATTAACTACTATTTCCATCCCAAAAATATAATAATTTTTACTAAAAA]
[+] EMBL BI806047 [GCCCCCCCCTCAACCGAGCTCCCTGACCTACTCCGCCAACGCTTCAGTGCTGCTGCCCGAGGCCACCCGACCGAGTCTGCGGCGGTCCCGGGTGCGGCTGGTGCAGGAGCCAAGGACTGCATCGACGACGACTACGTGCGATCCCCCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAAGCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACAGTCGACTTCGGCAAGGGGAGGCGGCAGCACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCACTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCACTGCTCTCGTTCCGCAACCCCCTGCCGACACCTTCGAGCACCATTGCTGCACTGTCTTCCTCCTCGACCTCCGACGACGACCAGCCCGCCGTACCCGTACTATGACAACAGACCACACAACCAGCTCTGCTCCCATCATCAACATGACATCCTCGCCTATACTTCTTAATTAATCACTACTAATTAACTACTATTTCCATCCCAAAAATATAATAATTTTTACTAAAAA]
consensusID : consensus_11407#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 436 fasta sequence
[GGACTGCCTANAGCCGANCCTGGCGGCGACGTGGTCATCTCGGCGTGGACGGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTCCTNCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTNGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATNCCAAAATATAATAATTTTTACTACTNCGTTTCCAAATTACAATTATNTTTTGTTT]
[+] EMBL OS1321791 [GGACTGCCTANAGCCGANCCTGGCGGCGACGTGGTCATCTCGGCGTGGACGGGCTGGGGCTGGAGGACGTCGACTTCGGCAAGGGGAGGGCGGCGACATGGGCCCCCTCACCAGCGAGATTTACTGCGTCTTCCTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCCTGCTCTCGTTGCCGCAACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTCCTNCTCGACCTCGACGACGACCAGCCCGCCGTACCCGTACTAGTGGACAAGCAGGACCACGACAACCAGCTCGTGCGTGCCCATCATCAACATGACATCCTNGCCTAGTAGCTTCTTAATTAATGCACTACTAATTAACTACTATTTCCATNCCAAAATATAATAATTTTTACTACTNCGTTTCCAAATTACAATTATNTTTTGTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 TAGATAGAGGAGAGGGTGGGCGCGCAACAGCAATAAGCATTATATAGAGAGGGAGTGAGA 60
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 GAGAGAGAGGTGGATTGATTTGAAGCAGAGCGCAGCAAGCATATAGTAGGTAGATATATA 120
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 TGGAGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGG 180
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCACGCCGCGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCT 240
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCATCAAGTACCTCTACGTCTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCCCTCAGGG 300
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGGAAGGCTCAGGCACCACG 360
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCGACGATAAGCTTGTGCTCGACTGCAATGCCGAGGGCGCGCTCTTCGCCGAGGCCTTCC 420
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 TGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGCCAAGCCGCACAAGT 480
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 --------------GTCTACAGTGCAGTGCAGTACTCCCTCAGATTGATCGATCGATCAG 46
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCTGGAGGAAGCTGCTCTACAGAGTCCACGCCGCCACCTTCGTCGCCGTCCCGCCGCTCG 540
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 ATGGTGTCGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACT 106
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 TCGTCCAGGTGACACAACTGGGGTGCGGAGGCATGGTAGTGTGTACAGCCATCAGCCACT 600
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 GCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAG 166
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 GCGTCTGCGACGGCATCGCAACCGCCAACTTCCTCCACGCCTGGGCCGCCTTCGCCGCAG 660
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 CCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCC 226
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCGACCTGGACCTCGCCGCCGATCGTGACGACGACCTCTCCGTCGTCCTCCATGACCGCC 720
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 GCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCA 286
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 GCGCCTTGCGCCCGCGCTGCCCTCCGCGCGTCGCCTTCACGCACCCGGAGTACCACACCA 780
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 GCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCT 346
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 GCAGCAGCAGCAGCAGCCTCCTCCTCATCCAGCCCCAGCTGATGCCGCTGGCCCCCGTCT 840
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 CCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCA 406
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCCTGACCTTCACAGCGGCCCACCTCCGGCGCCTCAAGGCCCGGTCGCTCCGCAGCTGCA 900
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 CCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGC 466
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CCTCCTTCGAGGCGCTGGCGGCGCACGTGTGGCGCGCCTGGGTCCTCTCCCTCGCCCCGC 960
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 CGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCA 526
consensus_11407#3 ------------------------------------------------GCCCCCCCCTCA 12
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CGCCCCCGCCCGACATGCGCGTCAAGCTCCTCTTCTCCGTCAACGTGCGCCGCCGCCTCA 1020
consensus_11407#2 --------------------------------------TATAGTAGGTAGATATATATGG 22
consensus_11407#1 AGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCA 586
consensus_11407#3 ACC--GAGCTCCCT--GACCTACTCCGCCAACGCTTCAGTGCTG--CTGC-CCGAGGCCA 65
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 AGCCGGAGCTCCCCTGGACCTACTGCGGCAACGCCTTCGTGCTGGCCTGCGCCGAGGCCA 1080
consensus_11407#2 AGATCGTGGGCGAGTGCGAGTACCGGGGCGAGGCGGTGTTGGTGACGCCGAGCTCGGCCA 82
consensus_11407#1 CGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGA--CTG 644
consensus_11407#3 C-CCGACCGAGTCTGCGGCGG--TCCCGGGTGCGGCTGGTGCAGGAG-CCAAGGA--CTG 119
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 CGCCGACCGAGCTGGCGGCGGGTGCCGGGGTGCGGCTGGTGCAGGAGGCCAAGGA--CTG 1138
consensus_11407#2 CGCCG--CGGCGCTCCCTCTACCTCTCCAACCTGGACGACCAGCGATTCCTCCGATTCTC 140
consensus_11407#1 CATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAA 704
consensus_11407#3 CATCGACGACGACTACGTGCGATCCCCCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAA 179
consensus_11407#4 ------------------------------------------------GGACTGCCTANA 12
consensus_11407#0 CATCGACGACGACTACGTGCGATCCACCGTGGACCTCCTCGACCAGCGGCGCGGCGCCAA 1198
consensus_11407#2 CATCAAGTACCTCTACGT-CTTCCCGCCCTCCGCCGCCGTGGCCGCCGACGCC-CTCAGG 198
* *
consensus_11407#1 GCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGAC-G 763
consensus_11407#3 GCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGACAG 239
consensus_11407#4 GCCGANCCTGGCGGCGACG-TGGTCATCTCGGCGTGGACG-GGCTGGGGCTGGAGGAC-G 69
consensus_11407#0 GCCGGACCTGGCGGCGACGCTGGTCATCTCGGCGTGGACGCGGCTGGGGCTGGAGGAC-G 1257
consensus_11407#2 GCCGCGCTCGCCAGGGCCCTCGTCCACTACTACCCACTGGCCGG-AAGGCTCAGGCAC-- 255
**** * * * * * * * ** * * * * **** * **
consensus_11407#1 TCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCG 823
consensus_11407#3 TCGACTTCGGCAAGGGGAGGCGGCAGCACATGGGCCCCCTCACCAGCGAGATTTACTGCG 299
consensus_11407#4 TCGACTTCGGCAAGGGGAGGGCGGCG-ACATGGGCCCCCTCACCAGCGAGATTTACTGCG 128
consensus_11407#0 TCGACTTCGGCAAGGGGAGGGCGGCGCACATGGGCCCCCTCACCAGCGAGATTTACTGCG 1317
consensus_11407#2 --CACGCCGACGATAAGCTTGTGCTCGAC-TGCAATGCCGAGGGCGCGCTCTTCGCCGAG 312
** ** * * * * ** ** ** *** ** * * *
consensus_11407#1 TCTTC-CTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTC-CTGCTCTCGTTGCCGCA 881
consensus_11407#3 TCTTCACTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTCACTGCTCTCGTT-CCGCA 358
consensus_11407#4 TCTTC-CTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTC-CTGCTCTCGTTGCCGCA 186
consensus_11407#0 TCTTC-CTCCCCGTCCTCGCCGACCCCAACGCCGTCACCGTC-CTGCTCTCGTTGCCGCA 1375
consensus_11407#2 GCCTTCCTGCCCACCCTCACCGCCGCCGACTTCCTCCGTGCCGGTGCCACCGC------- 365
* * ** *** **** *** * ** ** * ** * * *** **
consensus_11407#1 ACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTC-CTCCTCGACCTC-GAC 939
consensus_11407#3 ACCCCCTGCCGACACCTTCGAGCACCATTGCTGCACTGTCTTC-CTCCTCGACCTCCGAC 417
consensus_11407#4 ACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTC-CTNCTCGACCTC-GAC 244
consensus_11407#0 ACCCGCCGCCGACACCTTCGAGCACCATTGCTGCAGCTGCTTC-CTCCTCGACCTC-GAC 1433
consensus_11407#2 -CNAGCCGCACAAGTCCTGGAGGAA-GCTGCTCTACAGAGTCCACGCCGCCACCTTCGTC 423
* * ** * * * *** * **** * * * * * * **** * *
consensus_11407#1 GACGACCAGCC---CGCCGTACCCGTACTAGTGGACAAGCA--GGACCACGACAACCAGC 994
consensus_11407#3 GACGACCAGCC---CGCCGTACCCGTACTAT--GACAAC----AGACCAC-ACAACCAGC 467
consensus_11407#4 GACGACCAGCC---CGCCGTACCCGTACTAGTGGACAAGCA--GGACCACGACAACCAGC 299
consensus_11407#0 GACGACCAGCC---CGCCGTACCCGTACTAGTGGACAAGCA--GGACCACGACAACCAGC 1488
consensus_11407#2 GCCGTCCCGCCGCTCGTCGTCCAGACAGTACAGTACATCGATCGAACTAGTGCGTGCTGG 483
* ** ** *** ** *** * * ** *** ** * * * *
consensus_11407#1 TCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTA 1054
consensus_11407#3 TC---TGCTCCCATCATCAACATGACATCCTCGCCTAT--ACTTCTTAATTAAT-CACTA 521
consensus_11407#4 TCGTGCGTGCCCATCATCAACATGACATCCTNGCCTAGTAGCTTCTTAATTAATGCACTA 359
consensus_11407#0 TCGTGCGTGCCCATCATCAACATGACATCCTCGCCTAGTAGCTTCTTAATTAATGCACTA 1548
consensus_11407#2 TTGAAC-TAGCTAGCATTGATATT-CATCATCGCCGGCC--CGCCCTATTGTACGTAGTA 539
* * * *** * ** **** * *** * * ** * * * **
consensus_11407#1 CTAATTAACTACTATTTCCATCCCAAAA-TATAATAATTTTTACTACCTCCGTTCCAAAA 1113
consensus_11407#3 CTAATTAACTACTATTTCCATCCCAAAAATATAATAATTTTTACTAAAAA---------- 571
consensus_11407#4 CTAATTAACTACTATTTCCATNCCAAAA-TATAATAATTTTTACTACTNCGTTTCCAAAT 418
consensus_11407#0 CTAATTAACTACTATTTCCATCCCAAAA-TATAATAATTTTTACTACCTCCGTTCCAAAA 1607
consensus_11407#2 C-GATCAA-TACT-CTACTATGTGGAGA-TAAGGGAGTAATTAAGGATAACTATTGATGG 595
* ** ** **** * * ** * * ** * * ***
consensus_11407#1 TACAATTATCTCTGC--------------------------------------------- 1128
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 TACAATTATNTTTTGTTT------------------------------------------ 436
consensus_11407#0 TACAATTATCTCTGCTTTACAACTCAAATTTTGTCCAAAATACTTATTATCACTATGGAA 1667
consensus_11407#2 TATGATCA---------------------------------------------------- 603
consensus_11407#1 ------------------------------------------------------------
consensus_11407#3 ------------------------------------------------------------
consensus_11407#4 ------------------------------------------------------------
consensus_11407#0 TGCCAATTATCATATAATCACTTTCTATTTCTATTGAGAAAATGTTTTTAACAGTTCGAG 1727
consensus_11407#2 ------------------------------------------------------------
consensus_11407#1 -------------------
consensus_11407#3 -------------------
consensus_11407#4 -------------------
consensus_11407#0 TGGACGTCCAAAAAAAAAA 1746
consensus_11407#2 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||