These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11425#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 4303 fasta sequence [GCGACGGCGAGGCACCGGAGAACGCACACCGGCGACTCGACGGCGTCGTCGTACGAGCCGCAGCGGCGGCCGGTGGAGCACCAGGTCTCGTCCATGCACGCCGCCACCGCCTCCGACGACGGCGGCGGCGTCGACGACGTGGTGCCGGAGCGCAAGGTGACGGCGTTCGCGCTCCACGTCGCGGTGCTCGAGAAGGCCGCGTCGCACGTCGGCGCCGTCTGCTTCGTGTGGGCGACGGTGGTCATCCTCGGCGGGTTCGCCGCCGACCTCGACGCCCGGGACTTCTGGCTCGTCACCGCCATCCTCCTCGTCGAGGGGACGAGGGTGTTCAGCCGGAGCAACGAGCTCGATCTGCAGGAGCAGCCGATGCACCTCCCGGACGCCGCCGCCGCCGCCGCCGGAGACGACGACGACGACCCGCCGCCGCCGCACAAGGCGGCGGCGGCGGCCTCGCCCATCCACCTCCTCCCCCTCGGCGGCTGGCTCGTCGAGGCGAGGAACGTGAGCTACGTCCTCTACTGGCTCCAGCTCCTCTCGGCGTCGGCGTGCGTCGCGCTGTCGCTGCTGCGCCTCGCCACGCTCCGCTTCGCCGGCGACAATGGCGGCGGCGGCAACAAGAACGCGTACTACGCGCTGATGCTGTTCTACGTGCTCGCGCTGTCGGAGGCGGTGATCTTCCTGGTGGAGCGCGCGTACTGGGAGTGGGTGCTCAGCTATCGGCGCCTGGTCGAGGCGGTGAGCGGCGAGTGCGACCTCGGCGACGCCGGCGTGGTGCCGATCAAGCGGTTCTTCTACCGCGCCTTCTCGAGGTCGGTCGAGGGCGGCATCCTCGACGCCACGCGGACGGACCTCGTCTCCTTCGCCGTCGAGCTCCTCTCATCGGACTCCGGCGACGAGCAGCTCATCGGCGCGCACATCCTCCGGGGCTCCATCGCCAACCGCGACTCGGCGAGGCGGGCGGTGCGCAAGATCGGCACGTCGGCGGCCACCGTCGAGCGGCTGGTGGAGATGGTGAGCTGGAAGAGCCCCAGCAAGCGCCGCGTCAGGTCGCTCGCCGCCGAGGTCGTCCTCCGCCTCGCCGGCAAGCGCCGCAACCTCATCCGCGTCGCCGCCATCCCCGGCGCCATCGAGTCCATCTCCACCTTACTCGAGACCCCCACCACCGACGCCGCCGCCGGCGACCTCGCCATGAACGAGATGGGGCTCCACATCATGAAGAAGCTGGCGCGCGAGCACGGCAACGCGGCGAAGATCTCGAGCACAAGGGGTGTCCTCTCCAGGATCATACACTTCACCCGGACGAGCAGGGCGGCGCTGCAGATCTGCGCCGGCGGCGAGGGGAGCCTGCCGGCGAAGACGGTGCTCCGGTCGCTGTAGGTGGTGAAGAACCTCTCGAGCACGCCGGGGCACACCGGCGAGGCGATCAGGAGGGAGATCTCCGACAACGTGTTCGTCCTCGGCAACATCCGCAAGGTGCTCCAGCACGGCGGCGAGCGCCACGGCAAGATGCAGCTGACGGCGATCGGCGTCCTCGCCGACCTCGCCATCGACGGCGACGCCAAGGAGAGGATCGGCTGCACGGGCGACATGATCGCGCATCTGCTGGACATGTTCGCCGGCTCGCCGGAGTCGGCTCCGGCGGTCGCCTACGCGGCGCAGGGGGCGGCGCACATCAGGCTGCAGGCCGGCGAGGTGGTGGCGCTGCTCGCCCTCGAGAGCGCCGCCAACTGCGACCGGATACTCCGGGAAGCTGCCGTCGTCGAGAGGCTGGTGATGACGCTGCACCACCCCGGGCTGCAGATCACGTCATCCAGAATCCTACTGAACCTGTGCAGGTACAGCAGGAGCGACCACTTCTTGCAGCTCAGCAGCCTCACTGCAGCTGTCCCAATAGTGTTCAAAGCAATTATGGTTGAGAAGAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGGTTACAAGGCTTGCAACACCTGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAGGGAGGCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAGGTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGAGCTCGTCCCCTTCTTCAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGAGAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTCACTTGTAGATGATGCCATGGAAATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCACAGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAATCTAATTGTAAATTCAGAAATAATCTATTCAATTGA-TCAGTCAAAACTGTAAATAACAAAAGGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTTCTGGCATTCAAACAGGAAAACTGAAGCCAAGGTGCCATCTAGAAACGTTACAGGGAAACTCAATCTTCATCTAGAAACGTTACAGGGAAACTCAATCTTCGTCTGGTAATGTGGAGATGGGATCCCGGTTCACCCTGTGCTTCTTGCGCTTGAGTTTAGGCAATGCCTTTATCCAAGAAGGAACCTCGCAGCCTGAAGATATCAGCACATTTGCGATGTTCCGCAAGAATGGCTTATCCTCCTCGGTGAAGAATGTGATGGCCTCCCCTGATCTACCTGCTCTTCCAGATCGTCCTATTCGGTGAATATAGGCAGAAGCTGACTCTGGAAAATCATAGTTGATAACGCAGTTAACACCTTTGAAATCCATTCCCCGGGCAATGACTTCGGTAGCTATCAGTACCCAAGTCTTTCCGGCTCTCAAGTTGTCAACAGCATCTTGACGCTGCTCCTCATCAAGGTCCGCATGAATTACATCAGCTCTTACGTCATCAAATGCCAGTTCTTTGTAAAGTTCTTTTGCCCTCTCTTTGCTTTGAACAAAGATCAATACTGGAGGATTGAGAGATTCTGCAAAGCTTTGGCGAAGAGCTAGCAACTTCCCCTTCTCAGTTCCAGCGAAAATCAACTTTTGCTTAATCAGTGAAGAGGCTGAATTCTTTCTTCCCACGATGACTCGAACAGCATCGTGCATTATCGTGCGTGCAAGCGTTTCTATTGAATCAGGCAATGTGGCACTAAACAGAGATCGAATTATTGAAGGATTCGAGCAGGCTTTGACAACTGAATCAATCACTTCAACAAATCCAAGCTCAAAAAGTTTATCAGATTCATCCAAGACAAGGTATTCCACTCTACTTAAATCAAGGTCTCTTTTTTGTACAGCGTGGTCCAGACGAAGTGGGGTGGAGATCAGGATGTCACAATGCATATCCTTGAAATTCCCAGATTTTGATAGATCTTTTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGGTTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATCCTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAGGTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAGGTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCATACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGTGAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCCTCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGTCCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAGCAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGCGCTTCCGCTTCTTCTCCGGCGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGCCTTGCCGGAACCGGGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGAAGAGCGCCGACGAGAGCTTCGCCTTCTCCATGGCTAACCTTTGCCCGCCGCCGCCGCCGACGAGAATCTCCTCCTCTTAAAACCCTAGGTGGGTCCCACTTGCA] [+] EMBL AK111216 [GCGACGGCGAGGCACCGGAGAACGCACACCGGCGACTCGACGGCGTCGTCGTACGAGCCGCAGCGGCGGCCGGTGGAGCACCAGGTCTCGTCCATGCACGCCGCCACCGCCTCCGACGACGGCGGCGGCGTCGACGACGTGGTGCCGGAGCGCAAGGTGACGGCGTTCGCGCTCCACGTCGCGGTGCTCGAGAAGGCCGCGTCGCACGTCGGCGCCGTCTGCTTCGTGTGGGCGACGGTGGTCATCCTCGGCGGGTTCGCCGCCGACCTCGACGCCCGGGACTTCTGGCTCGTCACCGCCATCCTCCTCGTCGAGGGGACGAGGGTGTTCAGCCGGAGCAACGAGCTCGATCTGCAGGAGCAGCCGATGCACCTCCCGGACGCCGCCGCCGCCGCCGCCGGAGACGACGACGACGACCCGCCGCCGCCGCACAAGGCGGCGGCGGCGGCCTCGCCCATCCACCTCCTCCCCCTCGGCGGCTGGCTCGTCGAGGCGAGGAACGTGAGCTACGTCCTCTACTGGCTCCAGCTCCTCTCGGCGTCGGCGTGCGTCGCGCTGTCGCTGCTGCGCCTCGCCACGCTCCGCTTCGCCGGCGACAATGGCGGCGGCGGCAACAAGAACGCGTACTACGCGCTGATGCTGTTCTACGTGCTCGCGCTGTCGGAGGCGGTGATCTTCCTGGTGGAGCGCGCGTACTGGGAGTGGGTGCTCAGCTATCGGCGCCTGGTCGAGGCGGTGAGCGGCGAGTGCGACCTCGGCGACGCCGGCGTGGTGCCGATCAAGCGGTTCTTCTACCGCGCCTTCTCGAGGTCGGTCGAGGGCGGCATCCTCGACGCCACGCGGACGGACCTCGTCTCCTTCGCCGTCGAGCTCCTCTCATCGGACTCCGGCGACGAGCAGCTCATCGGCGCGCACATCCTCCGGGGCTCCATCGCCAACCGCGACTCGGCGAGGCGGGCGGTGCGCAAGATCGGCACGTCGGCGGCCACCGTCGAGCGGCTGGTGGAGATGGTGAGCTGGAAGAGCCCCAGCAAGCGCCGCGTCAGGTCGCTCGCCGCCGAGGTCGTCCTCCGCCTCGCCGGCAAGCGCCGCAACCTCATCCGCGTCGCCGCCATCCCCGGCGCCATCGAGTCCATCTCCACCTTACTCGAGACCCCCACCACCGACGCCGCCGCCGGCGACCTCGCCATGAACGAGATGGGGCTCCACATCATGAAGAAGCTGGCGCGCGAGCACGGCAACGCGGCGAAGATCTCGAGCACAAGGGGTGTCCTCTCCAGGATCATACACTTCACCCGGACGAGCAGGGCGGCGCTGCAGATCTGCGCCGGCGGCGAGGGGAGCCTGCCGGCGAAGACGGTGCTCCGGTCGCTGTAGGTGGTGAAGAACCTCTCGAGCACGCCGGGGCACACCGGCGAGGCGATCAGGAGGGAGATCTCCGACAACGTGTTCGTCCTCGGCAACATCCGCAAGGTGCTCCAGCACGGCGGCGAGCGCCACGGCAAGATGCAGCTGACGGCGATCGGCGTCCTCGCCGACCTCGCCATCGACGGCGACGCCAAGGAGAGGATCGGCTGCACGGGCGACATGATCGCGCATCTGCTGGACATGTTCGCCGGCTCGCCGGAGTCGGCTCCGGCGGTCGCCTACGCGGCGCAGGGGGCGGCGCACATCAGGCTGCAGGCCGGCGAGGTGGTGGCGCTGCTCGCCCTCGAGAGCGCCGCCAACTGCGACCGGATACTCCGGGAAGCTGCCGTCGTCGAGAGGCTGGTGATGACGCTGCACCACCCCGGGCTGCAGATCACGTCATCCAGAATCCTACTGAACCTGTGCAGGTACAGCAGGAGCGACCACTTCTTGCAGCTCAGCAGCCTCACTGCAGCTGTCCCAATAGTGTTCAAAGCAATTATGGTTGAGAAGAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGGTTACAAGGCTTGCAACACCTGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAGGGAGGCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAGGTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGAGCTCGTCCCCTTCTTCAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGAGAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTCACTTGTAGATGATGCCATGGAAATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCACAGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAATCTAATTGTAAATTCAGAAATAATCTATTCAATTGA TCAGTCAAAACTGTAAATAACAAAAGGCAAGTGTA ] [-] EMBL AK063527 [ TCAGAAATAATCTATTCAATTGA TCAGTCAAAACTGTAAATAACAAAAGGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTTCTGGCATTCAAACAGGAAAACTGAAGCCAAGGTGCCATCTAGAAACGTTACAGGGAAACTCAATCTTCATCTAGAAACGTTACAGGGAAACTCAATCTTCGTCTGGTAATGTGGAGATGGGATCCCGGTTCACCCTGTGCTTCTTGCGCTTGAGTTTAGGCAATGCCTTTATCCAAGAAGGAACCTCGCAGCCTGAAGATATCAGCACATTTGCGATGTTCCGCAAGAATGGCTTATCCTCCTCGGTGAAGAATGTGATGGCCTCCCCTGATCTACCTGCTCTTCCAGATCGTCCTATTCGGTGAATATAGGCAGAAGCTGACTCTGGAAAATCATAGTTGATAACGCAGTTAACACCTTTGAAATCCATTCCCCGGGCAATGACTTCGGTAGCTATCAGTACCCAAGTCTTTCCGGCTCTCAAGTTGTCAACAGCATCTTGACGCTGCTCCTCATCAAGGTCCGCATGAATTACATCAGCTCTTACGTCATCAAATGCCAGTTCTTTGTAAAGTTCTTTTGCCCTCTCTTTGCTTTGAACAAAGATCAATACTGGAGGATTGAGAGATTCTGCAAAGCTTTAGCGAAGAGCTAGCAACTTCCCCTTCTCAGTTCCAGCGAAAATCAACTTTTGCTTAATCAGTGAAGAGGCTGAATTCTTTCTTCCCACGATGACTCGAACAGCATCGTGCATTATCGTGCGTGCAAGCGTTTCTATTGAATCAGGCAATGTGGCACTAAACAGAGATCGAATTATTGAAGGATTCGAGCAGGCTTTGACAACTGAATCAATCACTTCAACAAATCCAAGCTCAAAAAGTTTATCAGATTCATCCAAGACAAGGTATTCCACTCTACTTAAATCAAGGTCTCTTTTTTGTACAGCGTGGTCCAGACGAAGTGGGGTGGAGATCAGGATGTCACAATGCATATCCTTGAAATTCCCAGATTTTGATAGATCTTTTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGGTTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATCCTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAGGTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAGGTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCATACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGTGAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCCTCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGTCCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAGCAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGCGCTTCCGCTTCTTCTCCGGCGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGCCTTGCCGGAACCGGGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGAAGAGCGCCGACGAGAGCTTCGCCTTCTCCATGGCTAACCTTTGCCCGCCGCCGCCGCCGACGAGAATCTCCTCCTCTTAAAACCCTAGGTGGGTCCCACTTGCA] [+] EMBL CB660481 [ ATAATCTATTCAATTGACTC TTCAAAACTGTAAATAACAAAAGGCAAGTGTATTCTCCTCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTTCTGGCATTCAAACAGGAAAACTGAAGCCAAGGTGCCATCTAGAAACGTTACAGGGAAACTCAATCTTCATCTAGAAACGTTACAGGGAAACTCAATCTTCGTCTGGTAATGTGGAGATGGGATCCCGGTTCACCCTGTGCTTCTTGCGCTTGAGTTTAGGCAATGCCTTTATCCAAGAAGGAACCTCGCAGCCTGAAGATATCAGCACATTTGCGATGTTCCGCAAGAATGGCTTATCCTCCTCGGTGAAGAATGTGATGGCCTCCCCTGATCTACCTGCTCTTCCAGATCGTCCTATTCGGTGAATATAGGCAGAAGCTGACTCTGGAAAATCATAGTTGATAACGCAGTTAACACCTTTGAAATCCATTCCCCGGGCAATGACTTCGGTAGCTATCAGTACCCAAGTCTTTCCGGCTCTCAAGTTGTCAACAGCATCTTGACGCTGCTCCTCATCAAGGTCCGCATGAATTACATCAGCTCTTACGTCATCAAATGCCAGTTCTTTGTAAAGTTCTTTTGCCCTCTCTTTGCTTTGAACAAAGATCAATACTGGAGGATTGAGAGATTCTGCAAAGCTTTGGCGAAGAGCTAGCAACTTCCCCTTCTCAGTTCCAGCGAAAATCAACTTTTGCTTAATCAGTGAAGAGGCTGAATTCTTTCTTCCCACGATGACTCGAACAGCATCGTGCATTATCGTGCGTGCAAGCGTTTC ] [+] EMBL CB620374 [ ATAATCTATTCAATTGA CCCTTAAAAACTGTAAATAACAAAAGGGAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTTCTGGCATTCAAACAGGAAAACTGAAGCCAAGGGGCCATCTAGAAACGTTACAGGGAAACTCAATCTTCATCTAAAAACGTTACAGGGAAACTCAATCTTCGTCTGGTAATGTGGAGATGGGATCCCGGTTCACCCTGTGCTTCTTGCGCTTGAGTTTAGGCAATGCCTTTATCCAAGAAGGAACCTCGCAGCCTGAAGATATCAGCACATTTGCGATGTTCCGCAAGAATGGCTTATCCTCCTCGGGGAAGAATGTGATGGCCTCCCCTGATCTACCTGCTCTTCCAGATCGTCCTATTCTGTGAATATAGGCAGAAGCTGACTCTGGAAAATCATAGTTGATAACGCAGTTAACACCTTTGAAATCCATTCCCCGGGCAATGACTTCGGTAGCTATCAGTACCCAAGTCTGTCCGGCTCTCAAGTTGTCAACAGCATCTTGACGCTGCTCCTCATCAAGGTCCGCATGAATTACATCAGCTCTTACGTCATCAAATGCCAGTTCTTTGTAAAGTTCTTTTGCCCTCTCTTTGCTTTGAACAAAGATCAATACTGGAGGATTGAGAGATTCTGCAAAGCTTTGGCGAAGAGCTAACAACTTCCCCTTCTCAGTTCCAGCGAAAATCAACTT ] [-] EMBL CB620373 [ AGTGGGGTGGAGACCAGGATGTCACAATGCATATCCTTGAAATTCCCAGATTTTGATAGATCTTTTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGGTTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATCCTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAGGTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAGGTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCATACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGTGAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCCTCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGTCCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAGCAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGCGCTTCCGCTTCTTCTCCGGTGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGCCTTGCCGGAACCGCGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGAAGAGCGCCGACGAGGGCT ] [-] EMBL CB660480 [ AAATTCCCAGATTTTGATAGATCTTTTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGGTTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATCCTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAGGTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAGGTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCATACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGTGAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCCTCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGTCCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAGCAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGCGCTTCCGCTTCTTCTCCGGCGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGCCTTGCCGGAACCGGGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGAAGGGCGCCGACGAGAGCTTCGCCTTCTCCATGGC ] [-] EMBL CB629920 [ AGATTTTGATAGATCTTTTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGGTTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATCCTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAGGTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAGGTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCATACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGTGAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCCTCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGTCCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAGCAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGCGCTTCCGCTTCTTCTCCGGTGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGCCTTGCCGGAACCGCGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGAAGAGCGCAGGCGAGGGCTTC ] consensusID : consensus_11425#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 707 fasta sequence [TCTAGAACAAGATCACTTATTTCATTCTTCAGCAGACATCGTTGCTATGATTTGATGAATGATGTCTGCTACATGATTTCACAGGTGTTCAAAGCAATTATGGTTGAGAAGAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGATTACAAGGCTTGCAACACCTGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAAGGAGGCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAGGTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGA-GCTCGTCCCCTTCTTCAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGAGAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTCACTTGTAGATGATGCCATGGAGATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCACAGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAATCTAATTGTAAATTCAGAAATAATCTATTCAATTGATCAGTCAAAACTGTAAATAACAAAAGGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTT] [+] EMBL CB629921 [TCTAGAACAAGATCACTTATTTCATTCTTCAGCAGACATCGTTGCTATGATTTGATGAATGATGTCTGCTACATGATTTCACAGGTGTTCAAAGCAATTATGGTTGAGAAGAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGATTACAAGGCTTGCAACACCTGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAAGGAGGCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAGGTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGA GCTCGTCCCCTTCTTCAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGAGAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTCACTTGTAGATGATGCCATGGAGATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCACAGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAATCTAATTGTAAATTCAGAAATAATCTATTCAATTGATCAGTCAAAACTGTAAATAACAAAAGGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTT] [+] EMBL AU070994 [ AGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAGGTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGANGCTCGTCCCCTTCTTCAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGAGAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTCACTTGTAGATGATGCCATGGAGATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCACAGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAATCTAATTGTAAATTCAGAAATAATCTATTCAATTGATCAGTCAAAACTGTAAATAACAAAAaaaaaaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11425#0 GCGACGGCGAGGCACCGGAGAACGCACACCGGCGACTCGACGGCGTCGTCGTACGAGCCG 60 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CAGCGGCGGCCGGTGGAGCACCAGGTCTCGTCCATGCACGCCGCCACCGCCTCCGACGAC 120 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGCGGCGGCGTCGACGACGTGGTGCCGGAGCGCAAGGTGACGGCGTTCGCGCTCCACGTC 180 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GCGGTGCTCGAGAAGGCCGCGTCGCACGTCGGCGCCGTCTGCTTCGTGTGGGCGACGGTG 240 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GTCATCCTCGGCGGGTTCGCCGCCGACCTCGACGCCCGGGACTTCTGGCTCGTCACCGCC 300 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ATCCTCCTCGTCGAGGGGACGAGGGTGTTCAGCCGGAGCAACGAGCTCGATCTGCAGGAG 360 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CAGCCGATGCACCTCCCGGACGCCGCCGCCGCCGCCGCCGGAGACGACGACGACGACCCG 420 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CCGCCGCCGCACAAGGCGGCGGCGGCGGCCTCGCCCATCCACCTCCTCCCCCTCGGCGGC 480 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TGGCTCGTCGAGGCGAGGAACGTGAGCTACGTCCTCTACTGGCTCCAGCTCCTCTCGGCG 540 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TCGGCGTGCGTCGCGCTGTCGCTGCTGCGCCTCGCCACGCTCCGCTTCGCCGGCGACAAT 600 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGCGGCGGCGGCAACAAGAACGCGTACTACGCGCTGATGCTGTTCTACGTGCTCGCGCTG 660 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TCGGAGGCGGTGATCTTCCTGGTGGAGCGCGCGTACTGGGAGTGGGTGCTCAGCTATCGG 720 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CGCCTGGTCGAGGCGGTGAGCGGCGAGTGCGACCTCGGCGACGCCGGCGTGGTGCCGATC 780 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AAGCGGTTCTTCTACCGCGCCTTCTCGAGGTCGGTCGAGGGCGGCATCCTCGACGCCACG 840 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CGGACGGACCTCGTCTCCTTCGCCGTCGAGCTCCTCTCATCGGACTCCGGCGACGAGCAG 900 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CTCATCGGCGCGCACATCCTCCGGGGCTCCATCGCCAACCGCGACTCGGCGAGGCGGGCG 960 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GTGCGCAAGATCGGCACGTCGGCGGCCACCGTCGAGCGGCTGGTGGAGATGGTGAGCTGG 1020 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AAGAGCCCCAGCAAGCGCCGCGTCAGGTCGCTCGCCGCCGAGGTCGTCCTCCGCCTCGCC 1080 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGCAAGCGCCGCAACCTCATCCGCGTCGCCGCCATCCCCGGCGCCATCGAGTCCATCTCC 1140 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ACCTTACTCGAGACCCCCACCACCGACGCCGCCGCCGGCGACCTCGCCATGAACGAGATG 1200 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGGCTCCACATCATGAAGAAGCTGGCGCGCGAGCACGGCAACGCGGCGAAGATCTCGAGC 1260 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ACAAGGGGTGTCCTCTCCAGGATCATACACTTCACCCGGACGAGCAGGGCGGCGCTGCAG 1320 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ATCTGCGCCGGCGGCGAGGGGAGCCTGCCGGCGAAGACGGTGCTCCGGTCGCTGTAGGTG 1380 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GTGAAGAACCTCTCGAGCACGCCGGGGCACACCGGCGAGGCGATCAGGAGGGAGATCTCC 1440 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GACAACGTGTTCGTCCTCGGCAACATCCGCAAGGTGCTCCAGCACGGCGGCGAGCGCCAC 1500 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGCAAGATGCAGCTGACGGCGATCGGCGTCCTCGCCGACCTCGCCATCGACGGCGACGCC 1560 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AAGGAGAGGATCGGCTGCACGGGCGACATGATCGCGCATCTGCTGGACATGTTCGCCGGC 1620 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TCGCCGGAGTCGGCTCCGGCGGTCGCCTACGCGGCGCAGGGGGCGGCGCACATCAGGCTG 1680 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CAGGCCGGCGAGGTGGTGGCGCTGCTCGCCCTCGAGAGCGCCGCCAACTGCGACCGGATA 1740 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CTCCGGGAAGCTGCCGTCGTCGAGAGGCTGGTGATGACGCTGCACCACCCCGGGCTGCAG 1800 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ATCACGTCATCCAGAATCCTACTGAACCTGTGCAGGTACAGCAGGAGCGACCACTTCTTG 1860 consensus_11425#1 ---------TCTAGAACAAGATCACTTATTTCATTCTTCAGCAGACATCGTTGCTATGAT 51 ** **** * * * * ****** ** consensus_11425#0 CAGCTCAGCAGCCTC-ACTGCAGCTGTCCCAATAGTGTTCAAAGCAATTATGGTTGAGAA 1919 consensus_11425#1 TTGATGAATGATGTCTGCTACA-TGATTTCACAGGTGTTCAAAGCAATTATGGTTGAGAA 110 * * * ** ** ** * ** ************************** consensus_11425#0 GAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGGTTACAAGGCTTGCAACACC 1979 consensus_11425#1 GAGCAGCTTGCTTGAGGTGTCTATAGGATTGGCAATACAGATTACAAGGCTTGCAACACC 170 **************************************** ******************* consensus_11425#0 TGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAGGGAG 2039 consensus_11425#1 TGAATTTCACAAGGAAATCTTTGGAAAGGCAGGTGTACCAGATACAGACATTGCAAGGAG 230 ******************************************************* **** consensus_11425#0 GCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAG 2099 consensus_11425#1 GCTAGTGGAGATTCTGAAAGAGCACAGGACACCCAGGGTGAAGGTTCCGAGGATGAGAAG 290 ************************************************************ consensus_11425#0 GTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGAGCTCGTCCCCTTCTT 2159 consensus_11425#1 GTTCGTCATCGAGCTCGCCATCGCCATGATGAGAGGCGACGCCGAGCTCGTCCCCTTCTT 350 ************************************************************ consensus_11425#0 CAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGA 2219 consensus_11425#1 CAGGAGCATGGAGCTGGAGAAGGAGCTCAGGAGCGTCGTCAGGTCGACGTCCGAGCTCGA 410 ************************************************************ consensus_11425#0 GAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTC 2279 consensus_11425#1 GAGCTTCAACATGTTCTCTGGCAGCATTGGGCTGAGCAGGCACAGCTCAACTCTGGCCTC 470 ************************************************************ consensus_11425#0 ACTTGTAGATGATGCCATGGAAATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCAC 2339 consensus_11425#1 ACTTGTAGATGATGCCATGGAGATCATGCAGGCTCTGCAAGACAGTTAACAAATGACCAC 530 ********************* ************************************** consensus_11425#0 AGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAAT 2399 consensus_11425#1 AGGACAGACTGAAAATGGTAAATGCCTGTGATTGGTTGTATGTTGGGATATGCGATGAAT 590 ************************************************************ consensus_11425#0 CTAATTGTAAATTCAGAAATAATCTATTCAATTGATCAGTCAAAACTGTAAATAACAAAA 2459 consensus_11425#1 CTAATTGTAAATTCAGAAATAATCTATTCAATTGATCAGTCAAAACTGTAAATAACAAAA 650 ************************************************************ consensus_11425#0 GGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTTCTG 2519 consensus_11425#1 GGCAAGTGTATTCTCATCTCAGGCTTCAGTCAACAAAACTAATAGAGGCAGCAGTTT--- 707 ********************************************************* consensus_11425#0 GCATTCAAACAGGAAAACTGAAGCCAAGGTGCCATCTAGAAACGTTACAGGGAAACTCAA 2579 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TCTTCATCTAGAAACGTTACAGGGAAACTCAATCTTCGTCTGGTAATGTGGAGATGGGAT 2639 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CCCGGTTCACCCTGTGCTTCTTGCGCTTGAGTTTAGGCAATGCCTTTATCCAAGAAGGAA 2699 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CCTCGCAGCCTGAAGATATCAGCACATTTGCGATGTTCCGCAAGAATGGCTTATCCTCCT 2759 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CGGTGAAGAATGTGATGGCCTCCCCTGATCTACCTGCTCTTCCAGATCGTCCTATTCGGT 2819 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GAATATAGGCAGAAGCTGACTCTGGAAAATCATAGTTGATAACGCAGTTAACACCTTTGA 2879 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AATCCATTCCCCGGGCAATGACTTCGGTAGCTATCAGTACCCAAGTCTTTCCGGCTCTCA 2939 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AGTTGTCAACAGCATCTTGACGCTGCTCCTCATCAAGGTCCGCATGAATTACATCAGCTC 2999 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TTACGTCATCAAATGCCAGTTCTTTGTAAAGTTCTTTTGCCCTCTCTTTGCTTTGAACAA 3059 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AGATCAATACTGGAGGATTGAGAGATTCTGCAAAGCTTTGGCGAAGAGCTAGCAACTTCC 3119 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CCTTCTCAGTTCCAGCGAAAATCAACTTTTGCTTAATCAGTGAAGAGGCTGAATTCTTTC 3179 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TTCCCACGATGACTCGAACAGCATCGTGCATTATCGTGCGTGCAAGCGTTTCTATTGAAT 3239 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CAGGCAATGTGGCACTAAACAGAGATCGAATTATTGAAGGATTCGAGCAGGCTTTGACAA 3299 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CTGAATCAATCACTTCAACAAATCCAAGCTCAAAAAGTTTATCAGATTCATCCAAGACAA 3359 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGTATTCCACTCTACTTAAATCAAGGTCTCTTTTTTGTACAGCGTGGTCCAGACGAAGTG 3419 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GGGTGGAGATCAGGATGTCACAATGCATATCCTTGAAATTCCCAGATTTTGATAGATCTT 3479 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TTGTCATTAGTTTAATATAAAACTTTCTTCCTTTTGCTAACTTCTTGCACTCTCTTGTGG 3539 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TTTGTGCTGCCAATTCCCTTGTTGGGCAAAGAATCACAGCTTTAACACCCTCTTTAGATC 3599 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CTGGCTTGATTTTCATAAGGATTGGGAACAAGAAAGCCAAAGTCTTGCCAGAACCTGTAG 3659 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GTGCACAGGCAAAGCACTCTCTCCCGGATAGAAGAATTGGAATGGCCTGCCTTTGGATAG 3719 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GTGTAGGTTCTTGAAATCCAAGTTTTGACAAGTTTCCAACCAAATATGAGTCGCAACCAT 3779 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 ACCTTGAAACCAGTTCTTCAAAGTTCTCTAGCGGTGCTGGAACATTTTGTCCTGAAATGT 3839 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GAATATCAAACTTCTTCCGTAGTATTGCCGCTCTCTCGATTTCTCTCTCGACTTCCTTCC 3899 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 TCCGCCTTACAACCTCCGAGTCCTCACTCTTACCAGTCTCGACCTTCTTCTCCGAATCGT 3959 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CCTCATCCTTCTTTGCTGCCAATCCCTTGAACACACTGAACCCTTCCACAGCATCGGAAG 4019 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CAGAGTCGGCGCCTTCCGCCCGCCTCTTCTTGCTCTTCTTCGCCTTGGCCTTGCTCTGGC 4079 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 GCTTCCGCTTCTTCTCCGGCGACGGCGCGGCGGCGGAGGCCACGTCTGGGGCAGGCGGGC 4139 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CTTGCCGGAACCGGGCGAAGTCGCCGGCGAAGCGCTTGCGGTCGAAGTGCGTGCCGGCGA 4199 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 AGAGCGCCGACGAGAGCTTCGCCTTCTCCATGGCTAACCTTTGCCCGCCGCCGCCGCCGA 4259 consensus_11425#1 ------------------------------------------------------------ consensus_11425#0 CGAGAATCTCCTCCTCTTAAAACCCTAGGTGGGTCCCACTTGCA 4303 consensus_11425#1 -------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||