These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11442#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1676 fasta sequence [TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAACACTCTCTTAGATTACCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT] [+] EMBL AK105954 [TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAACACTCTCTTAGATTACCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT] [+] EMBL CB642955 [ GCATGGCTTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGACACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCA ] [+] EMBL CB645838 [ GCGTCCACTGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCATGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACC ] [+] EMBL CB651848 [ ACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAAGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTC ] [+] EMBL CA753188 [ CGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCGGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTGAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTTGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCG CGGCGGCAACGGGTTGGGTGTGCCGT NTGCGA CAGCT GGCGT CTGTG CA CGTTCCGT ] [-] EMBL CB651849 [ AGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGAGGGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAA ] consensusID : consensus_11442#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 901 fasta sequence [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTCATCCACTCCGAGCACTGGCGCGGCGCCGACCCCGCCGGCTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGCCGTNAGCAGCTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTTACTTGCTTGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGNGGCAGTCTTATGGCGCCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACAACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAATACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCGCGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAATATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG] [+] EMBL AW155435 [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTCATCCACTCCGAGCACTGGCGCGGCGCCGACCCCGCCGGCTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGCCGTNAGCAGCTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTTACTTGCTTGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGNGGCAGTCTTATGGCGCCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACAACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAATACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCGCGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAATATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG] consensusID : consensus_11442#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 728 fasta sequence [GGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCGCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAACACTCTCTTAGATTATCCAGCCTTAAAAAAAAGA] [-] EMBL CB642956 [GGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCGCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAACACTCTCTTAGATTATCCAGCCTTAAAAAAAAGA] consensusID : consensus_11442#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTCATTCCCTCCGAGCACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGTGGTGGCCGTNTACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTTTCCTTCTGTTGGGCGTACGACTAGACAGGACCGAATCCATTATCTTATTTTACACAAACCGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGTTAAAGAAT] [+] EMBL AW155496 [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTCATTCCCTCCGAGCACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGTGGTGGCCGTNTACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTTTCCTTCTGTTGGGCGTACGACTAGACAGGACCGAATCCATTATCTTATTTTACACAAACCGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGTTAAAGAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGC 60 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCAC 120 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTC 180 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACG 240 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 CTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCAC 300 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 GGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCC 360 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 GTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTAC 420 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 CTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACC 480 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGAC 540 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 CGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCA 600 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 TCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACA 660 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAG 720 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 CTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTC 780 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 GGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAG 840 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ------------------------------------------------------------ consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 CACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGC 900 consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 -------------------------------CGGTTGCTACGACGGTGGGAGCAGAAGAA 29 consensus_11442#3 -------------------------------CGGTTGCTACGACGGTGGGAGCAGAAGAA 29 consensus_11442#0 GTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCG---------- 950 consensus_11442#2 --------------------------------GGTCGCCGTGGCGCTGCG---------- 18 *** ** * ** ** * consensus_11442#1 ATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTA 89 consensus_11442#3 ATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTA 89 consensus_11442#0 -CGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGAC-----AGCGCCAGCGCCGGTGA 1004 consensus_11442#2 -CGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGAC-----AGCGCCAGCGCCGGTGA 72 **** * * * * * * * ** * * * **** * * consensus_11442#1 TGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATA 149 consensus_11442#3 TGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATA 149 consensus_11442#0 CCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGT 1064 consensus_11442#2 CCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGT 132 * ** *** * ** * * * * * * * ** consensus_11442#1 TTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGC 209 consensus_11442#3 TTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGC 209 consensus_11442#0 GCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTG-CGGGTGGAACTCGCTGC--- 1120 consensus_11442#2 GCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTG-CGGGTGGAACTCGCTGC--- 188 ** ***** * * * * *** * * * * * ** * consensus_11442#1 GTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAA 269 consensus_11442#3 GTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAA 269 consensus_11442#0 -TCGA-GGCCGTGTTC------GCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGA 1172 consensus_11442#2 -TCGA-GGCCGTGTTC------GCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGA 240 **** ******* * * * ** * ** * * ** ** ** * * * consensus_11442#1 CCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCA--CC 327 consensus_11442#3 CCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCA--CC 327 consensus_11442#0 TCAGGTGGTGGACGC------CCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCT 1226 consensus_11442#2 TCAGGTGGTGGACGC------CCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCT 294 * * ** *** *** ** * *** ***** ** * * ** ***** * consensus_11442#1 GTCGTCGTCACGGAGG-AGTGGCACG--GGCTGCTG-GCCTCCGCCGGTGTGCCCGCCAC 383 consensus_11442#3 GTCGTCGTCACGGAGG-AGTGGCACG--GGCTGCTG-GCCTCCGCCGGTGTGCCCGCCAC 383 consensus_11442#0 GTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGAT 1286 consensus_11442#2 GTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGAT 354 **** * ***** ** * *** *** ** * * * ** *** * *** * consensus_11442#1 GC-TGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTC-ATCCACTCCGAG 441 consensus_11442#3 GC-TGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTC-ATTCCCTCCGAG 441 consensus_11442#0 CCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAG 1346 consensus_11442#2 CCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAG 414 * ******** * * ** * ** ** * * * * * *** consensus_11442#1 CACTGGCGCGGCGCCGACCCCGCCGGCT-CTTCGAGGCCGTGGACGCCAAGATGGG-GGT 499 consensus_11442#3 CACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGT-GGT 500 consensus_11442#0 GAGGGCCGCGCTGCTG--CGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGT 1404 consensus_11442#2 GAGGGCCGCGCTGCTG--CGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGT 472 * * **** ** * * ** * * * * ****** * * * ** *** consensus_11442#1 G-C-CGTNA-GCAG-CTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTT 555 consensus_11442#3 GGC-CGTNT-ACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTT 558 consensus_11442#0 GGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGG---AGACTT 1461 consensus_11442#2 GGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGG---AGACTT 529 * * *** * * * * *** * * * * * **** consensus_11442#1 ACTTGCT--TGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGN- 612 consensus_11442#3 TCCTTCTGTTGGGCGTACGACTAGACAGG-ACCGAATCCATTATCTTATTTTACACAAAC 617 consensus_11442#0 AATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGT- 1520 consensus_11442#2 AATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGT- 588 * * ** * * * * * ** ** * * * consensus_11442#1 --GGCAGTCTTATGGCG-CCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACA 669 consensus_11442#3 CGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGT-TAAAGA 676 consensus_11442#0 ---GAATGCTTGTTGTGTATCAGTATC-CACG----TGGAGAATAATGGAAG---AGAAA 1569 consensus_11442#2 ---GAATGCTTGTTGTGTATCAGTATCGCACG----TGGAGAATAATGGAAG---AGAAA 638 * * * * ** *** * * * * * consensus_11442#1 ACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAAT 729 consensus_11442#3 AT---------------------------------------------------------- 678 consensus_11442#0 ATTTTACTTTAG--GTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAA-C 1626 consensus_11442#2 ATTTTACTTTAG--GTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAA-C 695 * consensus_11442#1 ACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCG 789 consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ACTC---TCTTAGATTA-CCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT------ 1676 consensus_11442#2 ACTC---TCTTAGATTATCCAGCCTTAAAAAAAAGA------------------------ 728 consensus_11442#1 CGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAAT 849 consensus_11442#3 ------------------------------------------------------------ consensus_11442#0 ------------------------------------------------------------ consensus_11442#2 ------------------------------------------------------------ consensus_11442#1 ATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG 901 consensus_11442#3 ---------------------------------------------------- consensus_11442#0 ---------------------------------------------------- consensus_11442#2 ---------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||