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Oryza sativa
cluster # 11472 cluster # 11472       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11472#0 length = 1560 sequences # 8  
consensus_11472#1 length = 783 sequences # 1  

consensusID : consensus_11472#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1560
fasta sequence
                              [CCAGCTAGCTGATAGCTGAGTCAATTTGTGTGACTTAATTTGCGACCACGTAGCAGTATATGTATAGTATTAGTATAGCCCCGAAGTTAGTTGAAGACCTCTTGGAGTAGAGATCGAGGAAGAAGAAATAATCAATGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGCCGGTGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCCGCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTATGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGAGGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGACGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGGCGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGGAGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACCGCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCTACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCA-CTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCT-CCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCA-CTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAACAATTAGTAATTACAAGGTACACAAGCTTTAGCAAAAAAAATTAAAA]

[+] EMBL AK071626             [CCAGCTAGCTGATAGCTGAGTCAATTTGTGTGACTTAATTTGCGACCACGTAGCAGTATATGTATAGTATTAGTATAGCCCCGAAGTTAGTTGAAGACCTCTTGGAGTAGAGATCGAGGAAGAAGAAATAATCAATGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGCCGGTGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCCGCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTATGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGAGGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGACGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGGCGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGGAGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACCGCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCTACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCA CTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCT CCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCA CTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAACAATTAGTAATTACAAGGTACAC                        ]
[+] EMBL CB651722             [                                                                                                                           AGAAATAATCCCTGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGCCGGTGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCCGCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTATGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGAGGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGACGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGGCGGCGTTCGCGCAGCACCCGGAATGGATCGAGGGCTACGGCCACGCGTTCGTCACGTCGGAGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACCGCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCTACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB654730             [                                                                                                                      gaagcccttATAATCTATGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGCCGGTGCCCAACGTGCAACACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCCGCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTATGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGAGGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGACGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGGCGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGGAGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACCGCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCTACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTtcc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB664271             [                                                                                                                                                                     TGGGTGGCTCGCTGCCGGCGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCCGCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTATGATACCTGTCGTTGACTTTGCCAGGCTCATCAATCACCATGAGGAGGCCGCCAAGCTGAGGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGACACGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGGCGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGGAGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACCGCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCTACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB664272             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCA CTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCT CCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCA CTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAACAATTAGTAA                                     ]
[-] EMBL CB651723             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCA CTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCT CCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCA CTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAACAATTAGTAA                                     ]
[-] EMBL CB654731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCA CTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCT CCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCA CTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTCCCTTTGAATAAACAAACAAATCTCGTTTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAACAATTAGGAATTACAAGGTACACAAGCTTTAGCAAAAAAAATTAAAA]
[+] EMBL BQ907492             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TACAAGAGCATCGAGCACCCGGT GT GTGGACNCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCACCTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCTCCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACCTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACCAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTTGCTTCATTGTACGCTACNGTTGCCTGAGTATACGGCTAATGTACATGTGTCTTGCTACATAAAAAAaaaa                                        ]


>consensus_11472#0 CCAGCTAGCTGATAGCTGAGTCAATTTGTGTGACTTAATTTGCGACCACGTAGCAGTATA TGTATAGTATTAGTATAGCCCCGAAGTTAGTTGAAGACCTCTTGGAGTAGAGATCGAGGA AGAAGAAATAATCAATGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGC CGGTGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCC GCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTA TGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGA GGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGA CGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGG CGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGG AGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACC GCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCT ACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGG GCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACT ACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGG ACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGA GGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCG ACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGG ACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGT ACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGG AGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTG TCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAA TCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACTTCAATTATTA GTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATA TAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTA TATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGT CTTGCTACATAAACAATTAGTAATTACAAGGTACACAAGCTTTAGCAAAAAAAATTAAAA



consensusID : consensus_11472#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 783
fasta sequence
                              [CGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCCCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTGGCTTCATTGTACGCTACAGTTGCCTGAGTAAAAAATAAAAGAA]

[-] EMBL CB658272             [CGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGTACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGGAGGACTACGTCAGGCCCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAATCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACTTCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTATATGAGGTTGGCTTCATTGTACGCTACAGTTGCCTGAGTAAAAAATAAAAGAA]


>consensus_11472#1 CGCAACCTGGGCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATG CGGATGAACTACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCG CCGCACTCGGACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTG CAGATCAGGAGGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCG AACGTCGGCGACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGG GTGGTGGTGGACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTC GGGTCGACGTACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGC ATCAGCGTGGAGGACTACGTCAGGCCCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATC TTGGACGCTGTCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATT AATCAATCAATCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACT TCAATTATTAGTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGT AAGGTTTATATAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAG GTTTGTTGTATATGAGGTTGGCTTCATTGTACGCTACAGTTGCCTGAGTAAAAAATAAAA GAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11472#0      CCAGCTAGCTGATAGCTGAGTCAATTTGTGTGACTTAATTTGCGACCACGTAGCAGTATA 60
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      TGTATAGTATTAGTATAGCCCCGAAGTTAGTTGAAGACCTCTTGGAGTAGAGATCGAGGA 120
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      AGAAGAAATAATCAATGGAGTGTTGGGAGAAGAAGCCAAGGAATCTGGGTGGCTCGCTGC 180
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      CGGTGCCCAACGTGCAAGACCTCGCCGCCCGCCCGGACCACCTCACGCCCACCCTCCTCC 240
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      GCCGCTATCTTCGCCCGCACCACCTGTCCCTGCCCGCCGACGACCACCATGCCATGGCTA 300
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      TGATACCTGTCGTTGACTTTGCCAGGCTCATCGATCACCATGAGGAGGCCGCCAAGCTGA 360
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      GGCACGCCTGCGAGGAGTGGGGTTTCTTCCAGGTGATCAACCACGGAATCGCCGACGAGA 420
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      CGGTGGAGGAGATGAAGCGCGACGTCATGGCCTTCTTCAACCTCCCGCTGGCCGACAAGG 480
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      CGGCGTTCGCGCAGCAGCCGGAATGGATCGAGGGCTACGGCCAGGCGTTCGTCACGTCGG 540
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      AGGACCAGACGCTGGACTGGTCCGACCTCTACTTCCTCACCACGCAGCCGCCCAGCTACC 600
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      GCGATCTCCGCTTCTGGCCACCGGAGACATCCTCCACCTTCCGCCGCTCCATGGACCGCT 660
consensus_11472#1      ------------------------------------------------------------
                                                                                   

consensus_11472#0      ACTCCCTCGAGACGCAGCGGGTGGCCACCGAGCTCCTCCGAGCCATGGCGCGCAACCTGG 720
consensus_11472#1      --------------------------------------------------CGCAACCTGG 10
                                                                         **********

consensus_11472#0      GCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACT 780
consensus_11472#1      GCCTGCGCGACGCCGACAAGATGACAAGGCTCGCCGCGGCGCAGTCCATGCGGATGAACT 70
                       ************************************************************

consensus_11472#0      ACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGG 840
consensus_11472#1      ACTACCCGCCATGCCCGGCCAAGGAGAGGGACAGGGTCCTGGGCGTGTCGCCGCACTCGG 130
                       ************************************************************

consensus_11472#0      ACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGA 900
consensus_11472#1      ACGCCGTGGGGCTGACGCTGCTGCTGCAGGTGAGCCCGGTGAAGGGGCTGCAGATCAGGA 190
                       ************************************************************

consensus_11472#0      GGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCG 960
consensus_11472#1      GGGGCGACGACTGGATCCCCGTCGACCCCATCCCCGGCGCACTGGTGGCGAACGTCGGCG 250
                       ************************************************************

consensus_11472#0      ACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGG 1020
consensus_11472#1      ACGTGGTCGAGATGGTGACGAACGGCAGGTACAAGAGCATCGAGCACCGGGTGGTGGTGG 310
                       ************************************************************

consensus_11472#0      ACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGT 1080
consensus_11472#1      ACGCGGCGCAGGAGCGGGTGTCCGTGGCGGCGTTCCACAACGCCACGTTCGGGTCGACGT 370
                       ************************************************************

consensus_11472#0      ACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGG 1140
consensus_11472#1      ACGGACCACTGGAGGAGATGGTGGGAGGCGGCGAGGCGCGCTACCGGAGCATCAGCGTGG 430
                       ************************************************************

consensus_11472#0      AGGACTACGTCAGGCTCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTG 1200
consensus_11472#1      AGGACTACGTCAGGCCCGTCGTCTCCAGCAAGCTCCAGGGCAAGAACATCTTGGACGCTG 490
                       *************** ********************************************

consensus_11472#0      TCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAA 1260
consensus_11472#1      TCAAGATTATTACTACGACTTAATTTCTCATCTTATCATGCCTGCTGATTAATCAATCAA 550
                       ************************************************************

consensus_11472#0      TCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACTTCAATTATTA 1320
consensus_11472#1      TCAATCTCCCTGGTTGGTTGGTTGCTGCCGAGTAAACTATTCATGCCACTTCAATTATTA 610
                       ************************************************************

consensus_11472#0      GTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATA 1380
consensus_11472#1      GTAGGTAAAAAGGATCTATCATGCATACTACTTTCCGTTTTTATTGGAGTAAGGTTTATA 670
                       ************************************************************

consensus_11472#0      TAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTA 1440
consensus_11472#1      TAGGAGTACCTTTGAATAAACAAACAAATCTCGTCTACTTTGATGTAAAGGTTTGTTGTA 730
                       ************************************************************

consensus_11472#0      TATGAGGTTTGCTTCATTGTACGCTACAGTTGCCTGAGTATACGGCTAATGTACATGTGT 1500
consensus_11472#1      TATGAGGTTGGCTTCATTGTACGCTACAGTTGCCTGAGTAAAAAATAAAAGAA------- 783
                       ********* ****************************** *     ** * *       

consensus_11472#0      CTTGCTACATAAACAATTAGTAATTACAAGGTACACAAGCTTTAGCAAAAAAAATTAAAA 1560
consensus_11472#1      ------------------------------------------------------------
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)