These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11506#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2270 fasta sequence [TGGACTGAAGGAGTAGAAAACGAGAAGATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA-GGGAGGGGATCCAGAGGAGGACAGGGAGG--AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG-GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG-TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT-GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAATTGCCTACCTCTGAATTTTTATATATATATTTTTTACTTTTGTTAAGATGTTTTGACTCCGTTCATCATAAGTAACTCATAAAATATTATGCAATCCTTTCTTGTCCTTTAAAGCATATTCTTCAACATTTAATGCTGGTATTTGCTCTGTGGGTGTACTCCATTTTATCAAATGCAATAGGTGTGGTGTTCTAAGAGTGGATTTACATTTGTAAACCAAACCTTCATGTTACTGTATTATATTGGTTTTGCCCTGTAATTGGACCAGATATTCCCTACAATCACTCCTAATACTAAATATTTTAAAGAACATACAACGGTTGCAAGCTGTTTTCAGAATTATATCTCTTAGAAGGTTTCCTGGCCACTTCCACCATTAAGATTTGAATTTTTTTTTTCAATTTTTAGTATATTTCATTGGATTTAACCTTCCATGTTGTGGTTAATCAATAGTCTGCCAGGGTTGGTTTTATCATCCTGACTTTGGCAAGGAAGGAATTGACTCTAATTTCGGTTAAGAGTCAGTTAAGTTGAGCAATGAATCAACATTACCCAAGAACCCGGTACAAGTCGGATTGTTCTTTTGCTGGAAGTGTCAGGCGTTAATGTCTGGTGCAAACGTGCAGGTTGTCCGTAGTTAAATTCTTTGGTGCCTGTTTGTGTATCATTAGCAGTATATAGAGTGTACTGGCCTCATTGAACGTGAGAGACCTGTGAAATATGGAACGTTTGTTGTTTACCAGTTGCAAAATTTTGTTGTTTGCCAAGT] [+] EMBL CF296361 [TGGACTGAAGGAGTAGAAAACGAGAAGATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGG ] [+] EMBL AK068918 [ ATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAATATTTGCCTACCTCTGAATTTTTATATATATATTTTTTACTTTTGTTAAGATGTTTTGACTCCGTTCATCATAAGTAACTCATAAAATATTATGCAATCCTTTCTTGTCCTTTAAAGCATATTCTTCAACATTTAATGCTGGTATTTGCTCTGTGGGTGTACTCCATTTTATCAAATGCAATAGGTGTGGTGTTCTAAGAGTGGATTTACATTTGTAAACCAAACCTTCATGTTACTGTATTATATTGGTTTTGCCCTGTAATTGGACCAGATATTCCCTACAATCACTCCTAATACTAAATATTTTAAAGAACATACAACGGTTGCAAGCTGTTTTCAGAATTATATCTCTTAGAAGGTTTCCTGGCCACTTCCACCATTAAGATTTGAATTTTTTTTTTCAATTTTTAGTATATTTCATTGGATTTAACCTTCCATGTTGTGGTTAATCAATAGTCTGCCAGGGTTGGTTTTATCATCCTGACTTTGGCAAGGAAGGAATTGACTCTAATTTCGGTTAAGAGTCAGTTAAGTTGAGCAATGAATCAACATTACCCAAGAACCCGGTACAAGTCGGATTGTTCTTTTGCTGGAAGTGTCAGGCGTTAATGTCTGGTGCAAACGTGCAGGTTGTCCGTAGTTAAATTCTTTGGTGCCTGTTTGTGTATCATTAGCAGTATATAGAGTGTACTGGCCTCATTGAACGTGAGAGACCTGTGAAATATGGAACGTTTGTTGTTTACCAGTTGCAAAATTTTGTTGTTTGCCAAGT] [+] EMBL AK102269 [ ATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCCGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTG ] [+] EMBL AK064338 [ TTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAACGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTCGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTG ] [+] EMBL CF337959 [ CACCTCTTCGCTCCGTCGCCTC CTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAAGGGGAGGGGATCCAGAGGAGGACAGGGAGGANAAAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTGNGGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGGTTGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTATGGGTCCAGTTCGAGAAagt ] [+] EMBL CF317341 [ CACCTCTTCGCTCCGTCGCCTC CTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCAC ] [-] EMBL CF337960 [ ATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAA ] [-] EMBL CF336809 [ ATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAA ] [-] EMBL CF296362 [ TCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGATTGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAAAAGACCTTTGCAGCTAgaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||