These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11520#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1205 fasta sequence [TGGACTGAAGGAGTAGAAAACGCAGCCGAAAAGCCAGAAAGGGGGGAGATATCAGACAGAGGAAGGAGGAGGGCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATGCCGCCGGGGAGGGCGGAGACGGCGCTGAACGCGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCAGGTTTGCATGGACAAGGAGAGCGTGAAGGAATACATCCTATGCGAGTACAACCGTGACGCTGACTCCTACAGGTCTCCTTGG-TCAAACAAATACGATCCTCCTTTGGAAGATGGAACAGTTCCCTCCGAAGAGATGAGGAATC-TTGAAGTTGAGGCAAATGATG-TTTTCTCTGTCTACCGTGACCAGTA-TTAC-GAAGGTGGCATCTCTTCTGTGTATATTTGGGAGGATGAAGATGAGAGTTTTATTGCATGCTTCTTAATAAAGAAAGATGGAGAAGGAAAAAGAGGGCACATGCAGATTGGTTCATGGGATGCTATTCATGTCATTCAGGTTGGTCCTGAAGAAGAAGGAGCAGCGCATTACTGCTTGAACAGCACTGTGATGCTATCATTGACAACAGATAACAAGCAATCTGGAACTTTCAAC-TTGTCGGGATCAATCAGGCGGCAGATGAGTATGACTCTTGCTGTGGCAGATGGGCACCTGGTTAATATGGGAAAAATGATAGAAGAAATGGAGGGCAAGCTCAGAAATTCGTTGGACCAGG-TTTATTTTGGGAAGACCAGAGAGATGGTTTGCACGCTTCGGCCACCACCCG-AAGTATTAAACAGGAGGCTACCTGACAGCTGAGAAAACGCAGAGATGTGAATTTTTAACA-CAAGAACTATATATTAGTCTTGCAATCATCTCCTTAGCGACCTAGAGTCTCTTTTCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCAATATTCTGTCATCTTTGTGAAGATCTACATCTTCTTGTGACCTTACAATTTGTTAAATCAATGCAAGAATATGGTTATCTGCTTAAAAAAAAA] [+] EMBL CF309798 [TGGACTGAAGGAGTAGAAAACGCAGCCGAAAAGCCAGAAAGGGGGGAGATATCAGACAGAGGAAGGAGGAGGGCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATGCCGCCGGGGAGGGCGGAGACGGCGCTGAACGCGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCA ] [+] EMBL CF292486 [ GAAAAGCC G AAGGGGGGAGATATCAGACAGAGGAAGGAGGAGGGCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATGCCGCCGGGGAGGGCGGAGACGGCGCTGAACGCGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCAGGTTTGCATGGACAAGGAGAGCGTGAAGGAATACATCCTATGCGAGTACAACCGTGACGCTGACTCCTACAGGTCTCCTTGG TCAAACAAATACGATCCTCCTTTGGAAGATGGAACAGTTCCCTCCGAAGAGATGAGGAATC TTGAAGTTGAGGCAAATGATG TTTTCTCTGTCTACCGTGACCAGTA TTAC GAAGGTGGCATCTCTTCTGTGTATATTTGGGAGGATGAAGATGAGAGTTTTATTGCATGC ] [+] EMBL AK061302 [ AAAGCCAGAAAGGGGGGAGATATCAGACAGAGGAAGGAGGAGGGCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATGCCGCCGGGGAGGGCGGAGACGGCGCTGAACGCGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCAGGTTTGCATGGACAAGGAGAGCGTGAAGGAATACATCCTATGCGAGTACAACCGTGACGCTGACTCCTACAGGTCTCCTTGG TCAAACAAATACGATCCTCCTTTGGAAGATGGAACAGTTCCCTCCGAAGAGATGAGGAATC TTGAAGTTGAGGCAAATGATG TTTTCTCTGTCTACCGTGACCAGTA TTAC GAAGGTGGCATCTCTTCTGTGTATATTTGGGAGGATGAAGATGAGAGTTTTATTGCATGCTTCTTAATAAAGAAAGATGGAGAAGGAAAAAGAGGGCACATGCAGATTGGTTCATGGGATGCTATTCATGTCATTCAGGTTGGTCCTGAAGAAGAAGGAGCAGCGCATTACTGCTTGAACAGCACTGTGATGCTATCATTGACAACAGATAACAAGCAATCTGGAACTTTCAAC TTGTCGGGATCAATCAGGCGGCAGATGAGTATGACTCTTGCTGTGGCAGATGGGCACCTGGTTAATATGGGAAAAATGATAGAAGAAATGGAGGGCAAGCTCAGAAATTCGTTGGACCAGG TTTATTTTGGGAAGACCAGAGAGATGGTTTGCACGCTTCGGCCACCACCCG AAGTATTAAACAGGAGGCTACCTGACAGCTGAGAAAACGCAGAGATGTGAATTTTTAACA CAAGAACTATATATTAGTCTTGCAATCATCTCCTTAGCGACCTAGAGTCTCTTTTCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCAATATTCTGTCATCTTTGTGAAGATCTACATCTTCTTGTGACCTTACAATTTGTTAAATCAATGCAAGAATATGG ] [+] EMBL AU161512 [ cgagGGAAGGAGGAGGGCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATG CGCGGNGGAGGGCGGAGACGGCGCTGAACGNGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCAGGTTTNCATGGACAAGGAGAGCNTGAAGGAATACATCCTATGCGAGTACAACCGTNACGCTGACTNCTACAGGTCTCCTTGGTTCAAACAAATACGGTCCTTCTTTNGAAGATGGAACAGTTNCCTCCGAAGAGATGAGGAATCTTTGAAGTTNAGGCAAATAATGTTTTTCTCTGTCTACCGTGACCAGTATTTACGGAAGGTGGCATCT TTCTG ] [+] EMBL AK104161 [ GCGGACATGGAGGCGGCGATGGATCTGATGCGGCGGATGCCGCCGGGGAGGGCGGAGACGGCGCTGAACGCGCTGCTCTCCCTCATCCCCGACCACTCCCTCGACCTCCTCTCCCAGGTCGACCTCCCGCTCCAGGTTTGCATGGACAAGGAGAGCGTGAAGGAATACATCCTATGCGAGTACAACCGTGACGCTGACTCCTACAGGTCTCCTTGG TCAAACAAATACGATCCTCCTTTGGAAGATGGAACAGTTCCCTCCGAAGAGATGAGGAATC TTGAAGTTGAGGCAAATGATG TTTTCTCTGTCTACCGTGACCAGTA TTAC GAAGGTGGCATCTCTTCTGTGTATATTTGGGAGGATGAAGATGAGAGTTTTATTGCATGCTTCTTAATAAAGAAAGATGGAGAAGGAAAAAGAGGGCACATGCAGATTGGTTCATGGGATGCTATTCATGTCATTCAGGTTGGTCCTGAAGAAGAAGGAGCAGCGCATTACTGCTTGAACAGCACTGTGATGCTATCATTGACAACAGATAACAAGCAATCTGGAACTTTCAAC TTGTCGGGATCAATCAGGCGGCAGATGAGTATGACTCTTGCTGTGGCAGATGGGCACCTGGTTAATATGGGAAAAATGATAGAAGAAATGGAGGGCAAGCTCAGAAATTCGTTGGACCAGG TTTATTTTGGGAAGACCAGAGAGATGGTTTGCACGCTTCGGCCACCACCCG AAGTATTAAACAGGAGGCTACCTGACAGCTGAGAAAACGCAGAGATGTGAATTTTTAACA CAAGAACTATATATTAGTCTTGCAATCATCTCCTTAGCGACCTAGAGTCTCTTTTCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCAATATTCTGTCATCTTTGTGAAGATCTACATCTTCTTGTGACCTTACAATTTGTTAAATCAATGCAAGAATATGG ] [+] EMBL CA755979 [ GGAGAGCGTGAAGGAATACATCCTATGCGAGTACAACCGTGACGCTGACTCCTACAGGTCTCCTTGG TCAAACAAATACGATCCTCCTTTGGAAGATGGAACAGTTCCCTCCGAAGAGATGAGGAATC TTGAAGTTGAGGCAAATGATG TTTTCTCTGTCTACCGTGACCAGTA TTAC GAAGGTGGCATCTCTTCTGTGTATATTTGGGAGGATGAAGATGAGAGTTTTATTGCATGCTTCTTAATAAAGAAAGATGGAGAAGGAAAAAGAGGGCACATGCAGATTGGTTCATGGGATGCTATTCATGTCATTCAGGTTGGTCCTGAAGAAGAAGGAGCAGCGCATTACTGCTTGAACAGCACTGTGATGCTATCATTGACNACAGATAACAAGCAATCTGGAACTTTCAACTTTGTC GGATCAATCAGGCGGCAGATGAGTATGACTCTTGCTGTGGCAGATGGGCACCTGGNTNATATGGGGAAAATGATAGAAGAAATGGAGGGCAAGCTCAG AATTCGTTGGAACAGGTTTTATTTTGGGGAGACCAGAGAGATGG TTGCACGCTTCGGCCACCACCCGAAAGTATT AACA GAGGg ] [-] EMBL CF309799 [ CACTGTGATGCTATCATTGACAACAGATAACAAGCAATCTGGAACTTTCAAC TTGTCGGGATCAATCAGGCGGCAGATGAGTATGACTCTTGCTGTGGCAGATGGGCACCTGGTTAATATGGGAAAAATGATAGAAGAAATGGAGGGCAAGCTCAGAAATTCGTTGGACCAGG TTTATTTTGGGAAGACCAGAGAGATGGTTTGCACGCTTCGGCCACCACCCG AAGTATTAAACAGGAGGCTACCTGACAGCTGAGAAAACGCAGAGATGTGAATTTTTAACA CAAGAACTATATATTAGTCTTGCAATCATCTCCTTAGCGACCTAGAGTCTCTTTTCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCAATATTCTGTCATCTTTG GAAa ] [-] EMBL CF292487 [ ACCTGACAGCTGAGAAAACGCAGAGATGTGAATTTTTAACA CAAGAACTATATATTAGTCTTGCAATCATCTCCTTAGCGACCTAGAGTCTCTTTTCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCAATATTCTGTCATCTTTGTGAAGATCTACATCTTCTTGTGACCTTACAATTTGTTAAATCAATGCAAGAATATGGTTATCTGCTTAAAAAA ] [+] EMBL AU032974 [ GTGAATTTTTAACACCAAGACCTATATATTAGGCTTGCAATCATCTCCTTAGCGACCTAGAGCCTCTTTNCGTAATTGATCTGTATTTAATAGTAGCAGTCTCTAAAATGGACACCACTTTGAGCCATCATAGGAGTGTCTTCTCCATTGAATTGTGAGGAAACTGGGCAAAGCTTCTTCATGGCAGCTGTAACAGAGAGTTTAAGCAAAAGGGAGCAGGAGTTTGCATTTGCCGAACTCGTTGTCACTGCCCCTGAGAGCNATATTCTGTCATCTTTGTGAAGATCTACATCTTCTTGTGACCTTACAATTTGTTAAATCAATGCAAGAATATGGTTATCTGCTTAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||