These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11536#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1406 fasta sequence [CCGGCCAATTTCCATCGCAGCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG-TGTGCATAAACTG-TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG-TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGTTCAGATTTGTCTTCGTTTTACAGTAAGTGGGCAAACTTATCAACTGAAGATTCAATAAGCT] [+] EMBL AK069502 [CCGGCCAATTTCCATCGCAGCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGGCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTAAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATG ] [+] EMBL AK104170 [ GCCATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGATGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCCTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTG ] [+] EMBL AK059316 [ ATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGT ] [+] EMBL AK104287 [ ATTTTTACCCCTAGCCCCCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACATGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAAC ] [+] EMBL AU069162 [ CCTCCGCTTCCTCCTTTTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATNGGAGGGGCGCACTTCCCCGGTGAGGCCGAGGTGGTGGCCGGGGAGGGCGACG CGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCNGGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACANCCGGTGTCACAAGTTGTNCATAAACTGTTGGTGTCAATATGGGNGAGTACTTTT ] [+] EMBL CB630235 [ TTTACATCCAAACCCCTCTTCCACTCCCCTCGCCGCCGCCGCCTCCGCCGTCGGGGAGGATGGGAGGGGCGCACTTCCCCGGTGAGGGCGAGGTGGTGGCCGGGGAGGGCGACGCCGTCGTCCCCCTCCGCGACGTGGGCAAGATGGAGCACGGGTGCGAGCATTACAGGAGGAGATGCAAGATCGTGGCGCCCTGCTGCGGCGAGGTGTTCGCTTGCCGCCATTGCCACAACGATGCCACGGCTTCAGGTGATCGGCATACCATTTGCCGCCAGGATGTTGAAAAAGTAGTATGTCTACTCTGTGATACTGAACAGCCGGTGTCACAAG TGTGCATAAACTG TGGTGTCAATATGGGAGAGTACTTTTGTGATGTATGCAAGTTTTATGATGATGATACAGAGAAAGGGCAGTTTCATTGCTACGATTGTGGCATATGCAGGGTTGGTGGCAAGGAAAACTACTTCCACTGCGCAAAGTGCGGGTCTTGTTATGCTGTTGCTCTGCGTGATAACCATCAGTGTGTGGAGAACTCAATGAGGCAGAATTGCCCAATTTGTTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCA ] [-] EMBL CB630236 [ TTATGAGTATCTATTTGATTCATTAAAAGGAACACGAGTTCTCGACTGTGGACACACGATGCACATGGAATGCTTTTCTGAGATGGTGGAACATAACAAATACACTTGTCCAATATGCTCCAAGACAGCTCTTGATATGACACATCACTGGGCATTGTTAGATCAAGAGATTGAAGCAACAATCATGCCTCCCGTCTACCGTTACAAGGTTTGGGTGCTCTGTAATGACTGCAACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCACTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTCTCCCTCGACGTCAGATTCGTCCGAAAACAATCTGTAGATAACATGCCACGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATATTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGTTCAGATTTGTCTTCGTTTTACAGTAAGTGGGCAAACTTATCAACTGAAGATTCAATAAGCT] [-] EMBL CA762297 [ aggacgagACAAGGTCTCAGAAGTGGACTTCCATGTGATTGGCCACAAGTGCAGCCCCTGCAACTCG TACAATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAGTTTTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATTTACAGTTTAGACAAACAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTTTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTGTTATCAGGTTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAATGGGTATGCGTACTCTACATGTTGATGATTGTATGTTGGT ] [+] EMBL AU069163 [ tcCCATGTGATTGCCCACAAGTGCAGCCCATGC ACTCGTTAC ATACTCGATCGACATCACGGCCTGCGGATTTATCAGGAAGCAG TCTCCCTCGACGTCAGATTCGTCCGAAAACAATCCGTAGATAACATGCCATGTTGGTGCCCAACAAGATCTACAGTTTAGACAATCAAGTCCCAGATTCATACATATACAAGTAGTAGAAGGAACATTGTTTTGCGGCTAGCCTATCCAAGTGCCTACCCAATTCTTCAAGATTCAATTGATTCCTTGAATCTTCATGTGTTGGAACTGCTACTAGACAAAAGCTATTGTGATGATACCATATGTTGTGTTGAATCTTTAATCACAGCCATGGCTTTTATCAGTGTGGGTGAAAGTGAAACCCATCATGTTATCCAGGAGCTGAATGTTGATGATTGCAATCCATGGAAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||