These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11543#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1487 fasta sequence [CTTCGTCTCCTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA-CTAGATCTTGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG-CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC-TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA-ACA-AGGAAGCTCACTAGAATTTCTC-AGAAGAGGATA-CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA-GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG-CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA-CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA-GGCGACAAGGATGCAAATTGC-CTGTGCTGCA-ATTGTACATTTTGTGATTGTAACA-TGTTACTGTGTGAGTAA-CA-GGCA-TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCGTGTTCATCCAAAAAAAAAAGGGG] [+] EMBL AK064929 [CTTCGTCTCCTCCTCTCCACCACTCATCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCCGCTCCCGCTCCCGCGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGACCTAGATCTCGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTC ] [+] EMBL CB626005 [ CTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCGAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA CTAGATCTTGTATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAGTTGTTCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAGTTCCCTGGATGAGGTATCTACCGGACCTGTTAATACCTTCTTCAGATCAATGAGAGATACCCTGGATTTTGACTTTGCTGACGATGTTGAAGATCGATGGAAATCTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAGCCCCTTCTCTTTAATCTTG ] [+] EMBL CB624013 [ CTCCTCTCCACCACTCGTCGTCGTCGGCGGCGTGGCCATGGCGACACCCGCGCCGCTCTCCGGCCTCCGCCCGCGCGCTCCAGCTCCCGCTCCCACGGCGCGCAGTCGCCTGTGCGGCCAGTCGCCGCCGGTCGTGGCCCCGCGGCTCGGGGCGTTCCCGCGGCGGCGTGGTGGGGCGGCACGGTGCTCGCCGCGCGCCGAGGCCGGGGACGTGGAGGCGCTTAGGGCGGGGGTGTCGGTGTACAAGCCGCGGTCCTACGACGTGCTCGTCTCCGACGCCGCCCGCTCCCTCGCCTGCGCCATGGACGAGGGCAAGACCCGCCTCGAGATCGAGTTCCCGCCTCTGCCAAGCAACATCTCTTCTTACAAGGGTTCCTCGGACGAGTTCATCGACGCCAACATCCAGCTTGCTCTTGCTGTTGCCAGAAAACTTAAGGAACTCAAGGGGA CTAGATCTTGAATTGTGTTTCCTGACCTACCAGAAAAGCGCAGGGCATCCCAATTGATCGGGACTGCTCTAGACTCGATTGAGACTGCAACTATCAACTCCCTGGATGAGGTATCTACCGGACCTGCTAATACCTTCTTCGGATCAATGAGAGATACCCTGGATTTTGA ] [-] EMBL CB624014 [ CTGATGAACCACCATCGCTATATATCTTCATCAATTGCAGCACACGTGACCTTTCAACTATAGAGAAGTATGTGGAACAATTTGCCTCATCTGTCCCAG CCCTTCTCTTTAATCTTGAACTAGATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAATAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCG ] [-] EMBL CB679293 [ ATACCTTGCGCTCTGACTTGGGGCTTCTGGGATTCCCACCAAAAGATTTGCATTACAGATTTCTTTCTCAGTTTACCCCAGTATTTTATATCAGGCAGCGTGACTACTCTAAGACAATTGCAGTCACTCCATATATCGTGAACTACAGTGGTGCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGACCAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAC CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTGGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCGCATTTTAAATGGAAATTCGTGTTCATCCAAAAAAAAAAGGGG] [-] EMBL CK085357 [ GCTGTATTCCGTCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAGTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGAAATTCGTGTTCATCCAAAA ] [-] EMBL CK085348 [ TCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGCACTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGATTAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGATTATGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAATGGTAATTCGTGTTTATCCAAAA ] [-] EMBL CA758231 [ TCAATACCCAGGGCCCTGGCAGGTCATGC TTAAGCAAGCCGATGGTTCTTATGCATGTGTTGCAGAGAGTGCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGA ACA AGGAAGCTCACTAGAATTTCTC AGAAGAGGATA CAAGAATGCTACTTGGTGGGAAGAGAATGTTGATCA GGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTG CCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGA CAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCA GGCGACAAGGATGCAAATTGC CTGTGCTGCA ATTGTACATTTTGTGATTGTAACA TGTTACTGTGTGAATAA CA GGCA TTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACATTTTAAAT ] [+] EMBL BM422018 [ GGCCAGTCATGCTTTAAGCAACCCGATGGTTC TAAGCATGTGTTCCAGAGAGTCCAGCTCGGTTCACTTTGGGACAGGCTAAGGAAGAACTGTTAAGAGTTCTTGGTTTGCAAGAAGATACACAGGAAGCTCACTAGAATTTCTCTAGAAGAGGATACCNAGAATGCTACTTGGTGGGAAGAGAATGTTGATCACGGAGAAATCGTCAGCATGGCGAACTTGAGGTTGAGGCCCTGCTGCTGCCCTTGTCTGGGTGCTGATCTGATTGGCGGCGAGTGCAGACCAGGAACAGAAGAAAAAAATGGTTGTCTGAAATTGCAGAGCCCACGGCGACAAGGATGCCAATTGC CTGTGCTGCANATTGTACATTTTGTGATTGTAACACTGTTACTGTGTGAATAACCACGGCACTTAGAGTTTTGAGAGGATTTTCCTTTCTTTTTCGATGATTATATATGTGTTGGACTCTGCTTCTTTGAAGCATGAAGCAACTTCACNTTTTAAATGGAAATTCGTGTTCATCCCAAAAAAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||