These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11571#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3308 fasta sequence [GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCAC-TTACATTTGCTATTCA-GGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCT-AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA-GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT--ATTTTTGCGAT-AACTTTCTTGTAAA-CTGTCTCT-AAATTGCA--CT-CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATACTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCCACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTACCACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCACAATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGCTTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGCTATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGCTCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTTCTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGAAAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGACTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGTCCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCTGACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACTTTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAACCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAAAACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCTTTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGCTCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTGGAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGACTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGAGATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTTTGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCTGGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAAGCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACACCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACTGGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCTGGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCTGCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAATAGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTATGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAATACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAAACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAGGGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAG-CAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGG---TTGGCTGTCACCACTTGTTCTTGTTGACATGAAAACTTCTGCTTCATCG-TTGCT-CTG-CAGAGCTGAGCTCTTCCTCATGGAGAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTGTGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAAGATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCGGCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCACTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT] [+] EMBL CF316193 [GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCAC TTACATTTGCTATTCA GGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCT AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAA ] [+] EMBL AU162346 [ TCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACNCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACNGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACNCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTTACATTTGCTATTCAGGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTNAGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGAGGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGNTCATGAGGCCAATGAGTACCGTGGTNTCTTCTCTTAGATGTAAATTTTTGCGATAAAATTTCTTGTAAA CTATCTCTAAAATTGCAGGTTANTCTTCTCCAGAA ] [+] EMBL C73650 [ GCGTGAAGTGAAACGGTTTGCTGATCTAAGTTCTAATGAGACTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCACAAAGCGTCTTCAC TTACATTTGCTATTCA GGATGGTCCAGAAGCTGGTCAAACTGTTTCACATGTCCACATCCATGTCATCCCT AGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGATTGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGGAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT ATTTTTGCGAT AACTTTCTTGTAAACCTGTCTCT AAATNGCA CT CTCTNCTC ] [+] EMBL AK119337 [ TGATGTCAAAGAGA GGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGGAAGAAATGGCTCATGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGT ATTTTTGCGAT AACTTTCTTGTAAA CTGTCTCT AAATTGCA CT CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATACTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCCACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTACCACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCACAATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGCTTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGCTATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGCTCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTTCTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGAAAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGACTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGTCCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCTGACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACTTTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAACCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAAAACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCTTTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGCTCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTGGAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGACTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGAGATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTTTGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCTGGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAAGCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACACCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACTGGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCTGGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCTGCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAATAGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTATGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAATACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAAACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAGGGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAG CAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGG TTGGCTGTCACCACTTGTTCTTGTTGACATGAAAACTTCTGCTTCATCG TTGCT CTG CAGAGCTGAGCTCTTCCTCATGGAGAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTGTGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAAGATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCGGCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCACTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT] [-] EMBL BI812083 [ ttTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGGAAATACACAAAATTTAGCACAA CTTAGTTACATCTC GGTG AATATATAAAATTTACAG AAACTACTACTACTG GGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATGAACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACGGTCCATGACAACGACCATAGCCATGACGAACG GACATCGACGCCTGG CTGACGACGAGGGTGAACACGTCGTCGCCGAGGCTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGTGATCCG GCTGCCTCCTCGCCGTTGCTG CACGGATCTTGCAGCTCCTCATGGAGAAGCCAGCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGGTAATTGGCTGTCA CACTTGTTCTTGTCGACATGAAAACTTCTGGTTCGTCGCGTGCTCCTGAAAGAGCTGAGCTCTTCCct ] consensusID : consensus_11571#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 863 fasta sequence [GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGGTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATATTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCATGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTGTAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF335997 [GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCGCCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACCCTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCGCCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAGGTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGTCATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAGGTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAAGCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATATGATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATATTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGA ] [-] EMBL CF335996 [ CACTTACATTTGCTATTCAGGATGGTCCCCAAGGTGGTCAAACTGTTCCACATGTCCACATCCATGTCATCCCTAAAAGGAAAGGAGATTTTTAGAAAAATGATGAGATATATGATGCGGTTTGTGGGATATTCCTCAATCGACCTCCTTTTATCCAAAACTTGAACCCAATATTTTCCCCAAAATTTTTACTCAGTTGCTTTTTAAAAGATTGATGTCAAAAAGAGGGAATTGAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCATGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTGTAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensusID : consensus_11571#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 395 fasta sequence [CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATATGATNCGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATAAAAAAAAAAAAAAAA] [+] EMBL AU031331 [CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACATGTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATATGATNCGATTGATGTCAAAGAGAGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATAAAAAAAAAAAAAAAA] [-] EMBL CF316194 [ AGGGAATTGAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCATGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTGTAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTCTGTCATCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAAaa ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11571#0 ----------------GGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCG 44 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 GAGTAAAAGACGAGACGGCAGCTGATGCTTCCGGTGCTCTCCGCCGACCTCCGCCGCGCG 60 consensus_11571#0 CCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACC 104 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 CCCACTCCCTTCTCCCTTCTCCCTCTCGCTCTCGCTCCGCCGCCGCCGCCGCCTCCTACC 120 consensus_11571#0 CTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCG 164 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 CTTCTTCGGCGCCGGCCACTGCTTCTGCCGCGAGCCATCTCCTCCTCTACCTCGCCGCCG 180 consensus_11571#0 CCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAG 224 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 CCGGTCCAGGAGATGGAGGCGGCTTACAAGTTCGGGCCGTACAAGATCGACGCGAGGGAG 240 consensus_11571#0 GTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGT 284 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 GTGTTCCACTCCACGCCGCTGTCCTACGCCATGGTCAACCTCCGCCCACTCCTCCCTGGT 300 consensus_11571#0 CATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAG 344 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 CATGTTCTAGTGTGCCCCAAGCGTGAAGTGAAACGATTTGCTGATCTAAGTTCTAATGAG 360 consensus_11571#0 ATTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAA 404 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 GTTAGTGACTTATGGGTTACCGCAAAGGAAGTTGGTATACGGCTTGAACAGTACCACAAA 420 consensus_11571#0 GCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 464 consensus_11571#2 ---------CTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 51 consensus_11571#1 GCGTCTTCACTTACATTTGCTATTCAGGATGGTCCACAAGCTGGTCAAACTGTTCCACAT 480 *************************************************** consensus_11571#0 GTCCACATCCATGTCATCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGATGAGATATAT 524 consensus_11571#2 GTCCACATCCATGTCANCCCTAGAAAGAAAGGAGATTTTGAGAAAAATGNTGAGATATAT 111 consensus_11571#1 GTCCACATCCATGTCATCCCTAGAAGGAAAGGAGATTTTGAGAAAAATGATGAGATATAT 540 **************** ******** *********************** ********** consensus_11571#0 GATGCG------------------------------------------------------ 530 consensus_11571#2 GATNCG------------------------------------------------------ 117 consensus_11571#1 GATGCGGTTTGTGGCATATTCCTCAATCGACCTCCTTTTATCCAATACTTGAACCCAATA 600 *** ** consensus_11571#0 -------------------------------------ATTGATGTCAAAGAGAGGGAATT 553 consensus_11571#2 -------------------------------------ATTGATGTCAAAGAGAGGGAATT 140 consensus_11571#1 TTTACCACAAAATTCTTACTCAGTTGCTTTCTAATAGATTGATGTCAAAGAGAGGGAATT 660 *********************** consensus_11571#0 GAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGAACCATGAAAGAAATGGCTCA 613 consensus_11571#2 GAAGGAGAAACTTGATCTGGACATAGAGAGAAAAGATAGANCCATGAAAGAAATGGCTCA 200 consensus_11571#1 GAAGGAGAAACTTGATTTGGGCATAGAGAGAAAAGATAGAACCATGAAAAAAATGGGTCA 720 **************** *** ******************* ******** ****** *** consensus_11571#0 TGAGGCCAATGAGTACCGTGCTCTCTTCTCTTAGATGTA-TTTTTGCGATAACTTTCTTG 672 consensus_11571#2 TGAGGCCAATGAGTACCGTGGTCTCTTCTCTTAGATGTAATTTTTGCGATAAATTTCTTG 260 consensus_11571#1 TGAGGCCAATGAGGACCGGGGTCCCTTTTTTTAAAAGTAATTTTTGCGATAAATTTTTTG 780 ************* **** * ** *** * *** * *** ************ *** *** consensus_11571#0 TAAACTGTCTCTAAATTGCACT--CTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCA 730 consensus_11571#2 TAAACTATCTCTAAATTGCAGTTACTCTTCTCCAGAAATTATTTTTGTAACTGTTTGTCA 320 consensus_11571#1 TAAACTATTTTTAAATTGCAGTTACTTTTTTCCAGAAATTATTTTTGTAAAAAAAAAAAA 840 ****** * * ********* * ** ** ******************** * consensus_11571#0 TCCATCATGGGAATTCAAGTCTTCGAATAATATTATGAAATTATCTAATTTGGTGTGATA 790 consensus_11571#2 TCCATCATGGGAATTCAAGTCTTCGAATGATATTATGAAATTATCTAATTTGGTACGATA 380 consensus_11571#1 AAAAAAAAAAAAAAAAAAAAAAA------------------------------------- 863 * * ** ** consensus_11571#0 CTTGTTTGTTGTAAAATGTGTTCTTACTTATAAATCTTTATCTTTGGAACTAGTTATGCC 850 consensus_11571#2 AAAAAAAAAAAAAAA--------------------------------------------- 395 consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 ACCGTGTGGCAGTAGTTGTTTGTTGGAAAATTTATATTTTTATGACAGATGTCCCTGTAC 910 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CACATGAAATTACACAGCCATATATTATCAGTAGCTGGTTGGGTCATACTATGGTTTCAC 970 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 AATCTACAAATAGTAACAAAACCCATCGTATAACCTTTCAGTACCTATTTGAAAGCCTGC 1030 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TTAAAAGAAAGAAGGATCATTCTTTTGGTCTTTTGGATCAAACAGAGTTGCAATCCATGC 1090 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TATCAACCCATTGCTTTTAGTTTCAGCTGAAAAATTGACTTTTCTTGAGATTTCCGTTGC 1150 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TCTTTAGTTATTCAGACACAGTATTTTGTTCCTTTGATCATGCTAGTTAGAAAGTTTGTT 1210 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CTCTTATGCTTATGCAGATTGCTGCGATAAATTCTGTTTTTGGCATGTTTTGTTGTGAGA 1270 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 AAAGCCAGAAATTCGACAAGGCATAGTAGCTGAAAGTTTGTTAGGCAGGATGGATCATGA 1330 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CTCAACTTTCTATCTAGCTCTTTGTGCCGACTCAAAGTTTTTATTCCTTCTGCCGACTGT 1390 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CCATGAAATCTACCATTACTGTTAGTCTATGCATCTAGCCAACATTCGAAAAGTTAACCT 1450 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GACTCATTAATACAATAATTCTGGCAATTTGTGGCCAATGGCTGTAATCCTGGCTAAACT 1510 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TTATATCATTCTGGCGCACTTTTCTGATAAGATCATGAAAACTTTAATGATCTGATTGAA 1570 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CCATGAAAATACTACTTTAATTTTGTATCATTGTGTAGTGTAGTCTTTATGTTTCTGAAA 1630 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 AACATGAACCATGGTTTTTACCCTTTTTGCTGCTTGTTTTTGCCTCCTGTGAACTTTTCT 1690 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TTGGTTAAGGGACTGTTCCATCAATCCCATTTAATCTAATGTTATTAGAACATAAGAGGC 1750 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TCTGATTTTGATTAGTCTCCATTGTTAACTCTTGTGCTTGCTTTACGCATATACATTCTG 1810 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GAAGATAGCTCAAATAACTGGTTAGATCTTAATCTCTTTTTGCTGATTTTTTTTCTGGGA 1870 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CTTGAGCACTTTTGGTCATTTTCATCTTTGCATCATGCTTGCTATCAAGAGGGCCATTGA 1930 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GATGATAAGATGCACTGAACAGAATTATTGATTATGCATATATGCCATAAGTTGCAATTT 1990 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TGATACGCCTGTAGCTACCTTTGACAAGTGGTAAAGAACAATTTGATTGGCAATTTGGCT 2050 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GGTTGTGTTCTGAAGTGGGATGTGACTGTTGCACCAGACCTGAGGATTTGGTAACGGTAA 2110 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GCTATCTGGAGCCCCTCACTTGTTGGCTGGGATTGTTGCCGGTGTACTAGGTAATCAACA 2170 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CCAAGTAAGCTTCTGTCGTAGTCGTGTGACCTGGTTTGCTTGGCTTGCATACCAACCACT 2230 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GGTTGTCTCTGCTGCTTAGAGGCTATTGTTGTGTTGAGTACGTTGTTGCAAATATTCGCT 2290 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GGAATATATACTCCTAGGTAGTATGCATGCTTCATCTCCATCAGCAGGAGATTCTCATCT 2350 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GCAAATGCAAAAGTAGTTCTTTCGGCAAAAAATATAGTGCCTCAGGTATCCACTCAGAAT 2410 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 AGCAAGTGCTTGTCGTTCTCTTGCTAGAAATGTGCACTCTGAGGTCACATACTCACATTA 2470 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TGTACTCTTTATAAAGCCTGAACTTTTCGCAAATTTTCTTCATGTGAAATAGTTGCAAAT 2530 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 ACACAAAATTTAGCACAACCTTAGTTACATCTCAGCTGCAATATATAAAATTTACAGCAA 2590 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 ACTACTACTACTGCGGTTTAGATGGTATTTTTCCTTGGATTTGATGATTTCTCCACTATG 2650 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 AACTACTGAATTTCCAGATGATGAACACGCCATTGGTGTGTAGGGCCTCCGGCAGATACG 2710 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GTCCATGACAACGACCATAGCCATGACGACCGCAACATCGACGCCTGGCCTGACGACGAG 2770 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GGTGAACACGTCGTCGCCGAGACTGACCGGTCTGGACATCACGCCGGCGTTCTTCCTCGT 2830 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GATCCGCGCCGCCTCCTCGCCGTTGCTGCCGCGGATCTTGCAGCTCCTCATGGAGAAGCA 2890 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GCCGTCGATTCTGAAGCTGGGGCTGGGAGAAGCATCAGGTTGGCTGTCACCACTTGTTCT 2950 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TGTTGACATGAAAACTTCTGCTTCATCGTTGCTCTGCAGAGCTGAGCTCTTCCTCATGGA 3010 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GAAGACTTGCTGCTGTGACACTGAAGGAGAACTTGTGCTGTCCAAGCCTTCTTCCTCTTG 3070 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 TGCTCTGTAACAGTTCCATCGATTGTGCAGGCTGAGAATCTGTCACATTAGAGCAATGAA 3130 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GATTAGTTTTTAATTTACGCTGATTATCTGTTTTTTACATTGCTTAGTTCAAAAATAGCG 3190 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 GCTGAAGAAAAGTTGACAACGAATCATGCAGATCATGTTTCTTTTATTACTTCTTTGTCA 3250 consensus_11571#2 ------------------------------------------------------------ consensus_11571#1 ------------------------------------------------------------ consensus_11571#0 CTTAACTGAAAATTGCAAGTTGCAAATGGAGAGATCTAATGTGAAGCACATAAAGGTT 3308 consensus_11571#2 ---------------------------------------------------------- consensus_11571#1 ---------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||