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Oryza sativa
cluster # 11576 cluster # 11576       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11576#0 length = 2265 sequences # 6  
consensus_11576#1 length = 582 sequences # 3  

consensusID : consensus_11576#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2265
fasta sequence
                              [CCCACCTCGTCAGTGACCTACTCTCCATTAATTACGCTAACTCCTCACGTCGTCTCGCCCGCAAAATGCTTCTCTTCCTCCTCTTCCTCCTCGCCGCCGGCGAGGCCGCGGCGGCGGCGGCGGCCACCACGCTCACCGCGACGCCGGCGAAGCTCACCCAGTCCGACCGCGAGATCACGATCCGGTGGTCGGGCCTCCCGGACCCGGACGGCCTCGACTACGTCGGCATCTACTCGCCGCCGACCTCCTCCGACCGCGACTTCCTCGGCTACCTCTTCCTCAACGGCTCGGCCACCTGGCGCACGGGCACCGGCGAGCTCACCCTCCCGCGCCTCCCCAACCTGCGCGCGCCCTACCAGTTCCGCCTCTTCCGCTGGCCCGCGAGGGAGTACTCCTACCACCACATCGACCACGACGGGAACCCGCTCCCCCACGGCCGCCACCGCGTCGCCGCCTCCGGTGAGGTCGCCTTCGACTCCCCCTCCCGCCCCGACCAGGTGCACCTCTCGTTCGCCGACGGGGTCGACGAGATGCGGGTCATGTTCGTCTGCGGCGACGGCGGGAGGAGGGTGGTGAGGTACGGGCCGGCGAAGGAGGAGGGGGAGGGCTGGAAGGAGGTGGCCGCGGAGGTGAGGACGTACGAGCAGAAGCACATGTGCGACTCGCCGGCGAACTCCTCCGTCGGGTGGAGGGATCCAGGGTTCGTCTTCGATGGACTCATGAAGGGATTGGAGCCCGGGAGGAGGTACTTCTACAAGGTTGGTAGCAACTCTTCAGGATGGAGCGATACGTACAGCTTCATTTCACGTGACAACGAAGCCAATGAAACTATTGCATTTCTCTTTGGTGACATGGGCACTTATATACCATATAACACCTATGTCCGCACGCAAGATGAAAGCTTGTCGACTGTAAAGTGGATACTTCGTGATATTCAAGCCCTTGGAGATAAGCCTGCATTTATTTCACACATTGGGGACATCAGCTATGCTAGAGGTTATGCTTGGGTATGGGATCACTTCTTCAACCAGATTGAGCCTATTGCTGCCAATACCCCATACCATGTCTGCATAGGAAATCATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAACAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATTCTTTTGTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATTCAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACCAATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTGTGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATAGACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGTAACATACAAAGTGACCCTTGCACTCTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCAACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTGGTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAAGGTTTCAATAAGTGACATTACGTTCACATCAATTGGTTGGTATGA]

[+] EMBL AK100372             [CCCACCTCGTCAGTGACCTACTCTCCATTAATTACGCTAACTCCTCACGTCGTCTCGCCCGCAAAATGCTTCTCTTCCTCCTCTTCCTCCTCGCCGCCGGCGAGGCCGCGGCGGCGGCGGCGGCCACCACGCTCACCGCGACGCCGGCGAAGCTCACCCAGTCCGACCGCGAGATCACGATCCGGTGGTCGGGCCTCCCGGACCCGGACGGCCTCGACTACGTCGGCATCTACTCGCCGCCGACCTCCTCCGACCGCGACTTCCTCGGCTACCTCTTCCTCAACGGCTCGGCCACCTGGCGCACGGGCACCGGCGAGCTCACCCTCCCGCGCCTCCCCAACCTGCGCGCGCCCTACCAGTTCCGCCTCTTCCGCTGGCCCGCGAGGGAGTACTCCTACCACCACATCGACCACGACGGGAACCCGCTCCCCCACGGCCGCCACCGCGTCGCCGCCTCCGGTGAGGTCGCCTTCGACTCCCCCTCCCGCCCCGACCAGGTGCACCTCTCGTTCGCCGACGGGGTCGACGAGATGCGGGTCATGTTCGTCTGCGGCGACGGCGGGAGGAGGGTGGTGAGGTACGGGCCGGCGAAGGAGGAGGGGGAGGGCTGGAAGGAGGTGGCCGCGGAGGTGAGGACGTACGAGCAGAAGCACATGTGCGACTCGCCGGCGAACTCCTCCGTCGGGTGGAGGGATCCAGGGTTCGTCTTCGATGGACTCATGAAGGGATTGGAGCCCGGGAGGAGGTACTTCTACAAGGTTGGTAGCAACTCTTCAGGATGGAGCGATACGTACAGCTTCATTTCACGTGACAACGAAGCCAATGAAACTATTGCATTTCTCTTTGGTGACATGGGCACTTATATACCATATAACACCTATGTCCGCACGCAAGATGAAAGCTTGTCGACTGTAAAGTGGATACTTCGTGATATTCAAGCCCTTGGAGATAAGCCTGCATTTATTTCACACATTGGGGACATCAGCTATGCTAGAGGTTATGCTTGGGTATGGGATCACTTCTTCAACCAGATTGAGCCTATTGCTGCCAATACCCCATACCATGTCTGCATAGGAAATCATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAACAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATTCTTTTGTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATTCAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACCAATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTGTGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATAGACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGTAACATACAAAGTGACCCTTGCACTGTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCAACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTGGTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAAGGTTTCAATAAGTGACATTACGTTCACATCAATTGGTTGGTATGA]
[+] EMBL AK062093             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGGTTATGCTTGGGTATGGGATCACTTCTTCAACCAGATTGAGCCTATTGCTGCCAATACCCCATACCATGTCTGCATAGGAAATCATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAACAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATTCTTTTTTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATTCAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACCAATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTGTGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATAGACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGCAACATACAAAGTGACCCTTGCACTCTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCAACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTGGTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAAGGTTTCAATAAGTGACATTA                         ]
[+] EMBL AK073350             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGCCAATACCCCATACCATGTCTGCATAGGAAATCATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAACAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATTCTTTTGTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATTCAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACCAATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTGTGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATAGACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGTAACATACAAAGTGACCCTTGCACTCTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCAACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTGGTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACGTGTGCTGTGTCAATCGTGGGCATTGTAGAG                                                                                       ]
[-] EMBL CA756529             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGTGGTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAAGGTTTCAATAAGT                                ]
[+] EMBL OSR18791A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTNAAGAACGAG                                                                                                                                                                                                                                                       ]
[+] EMBL OSR31841A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATCCGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTT                                                                                                                                                                                                                                                                                                                       ]


>consensus_11576#0 CCCACCTCGTCAGTGACCTACTCTCCATTAATTACGCTAACTCCTCACGTCGTCTCGCCC GCAAAATGCTTCTCTTCCTCCTCTTCCTCCTCGCCGCCGGCGAGGCCGCGGCGGCGGCGG CGGCCACCACGCTCACCGCGACGCCGGCGAAGCTCACCCAGTCCGACCGCGAGATCACGA TCCGGTGGTCGGGCCTCCCGGACCCGGACGGCCTCGACTACGTCGGCATCTACTCGCCGC CGACCTCCTCCGACCGCGACTTCCTCGGCTACCTCTTCCTCAACGGCTCGGCCACCTGGC GCACGGGCACCGGCGAGCTCACCCTCCCGCGCCTCCCCAACCTGCGCGCGCCCTACCAGT TCCGCCTCTTCCGCTGGCCCGCGAGGGAGTACTCCTACCACCACATCGACCACGACGGGA ACCCGCTCCCCCACGGCCGCCACCGCGTCGCCGCCTCCGGTGAGGTCGCCTTCGACTCCC CCTCCCGCCCCGACCAGGTGCACCTCTCGTTCGCCGACGGGGTCGACGAGATGCGGGTCA TGTTCGTCTGCGGCGACGGCGGGAGGAGGGTGGTGAGGTACGGGCCGGCGAAGGAGGAGG GGGAGGGCTGGAAGGAGGTGGCCGCGGAGGTGAGGACGTACGAGCAGAAGCACATGTGCG ACTCGCCGGCGAACTCCTCCGTCGGGTGGAGGGATCCAGGGTTCGTCTTCGATGGACTCA TGAAGGGATTGGAGCCCGGGAGGAGGTACTTCTACAAGGTTGGTAGCAACTCTTCAGGAT GGAGCGATACGTACAGCTTCATTTCACGTGACAACGAAGCCAATGAAACTATTGCATTTC TCTTTGGTGACATGGGCACTTATATACCATATAACACCTATGTCCGCACGCAAGATGAAA GCTTGTCGACTGTAAAGTGGATACTTCGTGATATTCAAGCCCTTGGAGATAAGCCTGCAT TTATTTCACACATTGGGGACATCAGCTATGCTAGAGGTTATGCTTGGGTATGGGATCACT TCTTCAACCAGATTGAGCCTATTGCTGCCAATACCCCATACCATGTCTGCATAGGAAATC ATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAA CAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATT CTTTTGTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATT CAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACC AATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTG TGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATA GACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGTAACATACAAAGTGACCCTTGCAC TCTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCA ACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTG GTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATC CGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTA CAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGG TGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATA CAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTG TAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGA AGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGT ATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATT TCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCA ATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAA GGTTTCAATAAGTGACATTACGTTCACATCAATTGGTTGGTATGA



consensusID : consensus_11576#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 582
fasta sequence
                              [AGACAAGGGGGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTNTGATCAGAAGGAAGAAAGAAGCTGCCCAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACCCCCTGTATTTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTNTTGGGGCTNTACAGTGTTGTACTATAGTGCATANAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTANAGTTTGATCAGCATATNTGTTGCCGTGATTTTNCGATACATAAAGGTTTCAATAAGTGACATTACGTTCCCCTCNAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA763540             [AGACAAGGGGGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGAAGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAGATCACACACTGTATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTCTTGGGGCTTTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTTTACGATACATAAAGGTTTCAATAAGTGACATTACGTTCACATCAAAAAAAAAAAAA        ]
[+] EMBL AU184634             [                                                                                                                                                                                                                                                                           CTCTTGGATTTNTGATCAGAAGGAAGAAAGAAGCTGCCCAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCNCCCCCTGTATTTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTNTTGGGGCTNTACAGTGTTGTACTATAGTGCATANAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTANAGTTTGATCAGCATATNTGTTGCCGTGATTTTNCGATACATAAAGGTTTCAATAAGTGACATTACGTTCCCCTCNAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU173252             [                                                                                                                                                                                                                                                                           CTCTTGGATTTNTGATCAGAAGGAANAAANAAGCTGCCCAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCCCCCCCTGTATTTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTNTTGGGGCTNTACAGTGTTGTACTATAGTGCATANAGTATTGTAACATGTGCTGTGTCAATCGTGGGCATTGTANAGTTTGATCAGCATATNTGTTGCCGTGATTTTNCGATACATAAAGGTTTCAATAAGTGACATTACGTTCCCCTCNAAAAAAAAAAAAAAAAAAAA]


>consensus_11576#1 AGACAAGGGGGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTACAAAGGAGA AGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGGTGGAGATAT TCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATACAAAGCTCA GCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTGTAGGCAGCG TGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTNTGATCAGAAGGAAGAAAGAAG CTGCCCAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACCCCCTGTATTTAATGC AAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATTTNTTGGGGC TNTACAGTGTTGTACTATAGTGCATANAGTATTGTAACATGTGCTGTGTCAATCGTGGGC ATTGTANAGTTTGATCAGCATATNTGTTGCCGTGATTTTNCGATACATAAAGGTTTCAAT AAGTGACATTACGTTCCCCTCNAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11576#0      CCCACCTCGTCAGTGACCTACTCTCCATTAATTACGCTAACTCCTCACGTCGTCTCGCCC 60
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GCAAAATGCTTCTCTTCCTCCTCTTCCTCCTCGCCGCCGGCGAGGCCGCGGCGGCGGCGG 120
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CGGCCACCACGCTCACCGCGACGCCGGCGAAGCTCACCCAGTCCGACCGCGAGATCACGA 180
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TCCGGTGGTCGGGCCTCCCGGACCCGGACGGCCTCGACTACGTCGGCATCTACTCGCCGC 240
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CGACCTCCTCCGACCGCGACTTCCTCGGCTACCTCTTCCTCAACGGCTCGGCCACCTGGC 300
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GCACGGGCACCGGCGAGCTCACCCTCCCGCGCCTCCCCAACCTGCGCGCGCCCTACCAGT 360
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TCCGCCTCTTCCGCTGGCCCGCGAGGGAGTACTCCTACCACCACATCGACCACGACGGGA 420
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      ACCCGCTCCCCCACGGCCGCCACCGCGTCGCCGCCTCCGGTGAGGTCGCCTTCGACTCCC 480
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CCTCCCGCCCCGACCAGGTGCACCTCTCGTTCGCCGACGGGGTCGACGAGATGCGGGTCA 540
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TGTTCGTCTGCGGCGACGGCGGGAGGAGGGTGGTGAGGTACGGGCCGGCGAAGGAGGAGG 600
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GGGAGGGCTGGAAGGAGGTGGCCGCGGAGGTGAGGACGTACGAGCAGAAGCACATGTGCG 660
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      ACTCGCCGGCGAACTCCTCCGTCGGGTGGAGGGATCCAGGGTTCGTCTTCGATGGACTCA 720
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TGAAGGGATTGGAGCCCGGGAGGAGGTACTTCTACAAGGTTGGTAGCAACTCTTCAGGAT 780
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GGAGCGATACGTACAGCTTCATTTCACGTGACAACGAAGCCAATGAAACTATTGCATTTC 840
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TCTTTGGTGACATGGGCACTTATATACCATATAACACCTATGTCCGCACGCAAGATGAAA 900
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GCTTGTCGACTGTAAAGTGGATACTTCGTGATATTCAAGCCCTTGGAGATAAGCCTGCAT 960
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TTATTTCACACATTGGGGACATCAGCTATGCTAGAGGTTATGCTTGGGTATGGGATCACT 1020
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TCTTCAACCAGATTGAGCCTATTGCTGCCAATACCCCATACCATGTCTGCATAGGAAATC 1080
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      ATGAATATGATTGGCCATTGCAACCTTGGAAACCTTGGTGGGCAACTGGTATATATGGAA 1140
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CAGATGGTGGAGGTGAATGTGGCATACCTTACAGCGTAAAGTTCAGAATGCCTGGCAATT 1200
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CTTTTGTGCCTACTGGCAATGGAGCTCCCGACACCCGAAATCTTTACTACTCCTTCGATT 1260
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CAGGGGTTGTGCATTTTGTTTACATGTCAACTGAGACTAATTTTGTTCAGGGCAGTGACC 1320
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      AATACAACTTCATAAAAGCTGACCTAGAGAAGGTCAACCGAAGTAGAACTCCTTTCATTG 1380
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TGTTTCAGGGCCACCGGCCAATGTATACATCAAGCAATGAAGCTAGGGATTTTGCTCATA 1440
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GACAGCAGATGCTCCAGAACCTGGAACCACTCTTGGTAACATACAAAGTGACCCTTGCAC 1500
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      TCTGGGGACATGTCCACAGGTACGAGAGGTTCTGCCCCATGAAAAACTTCCAATGTGTCA 1560
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      ACATGTCATCAAGCTTCGTATACCCTGGTGCCCCTGTTCATCTTGTGATCGGGATGGGTG 1620
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      GTCAAGATTATCAACCATTCTGGCAGCCAAGGAAGGATCACCCTGATGTACCTGTCTATC 1680
consensus_11576#1      ------------------------------------------------------------
                                                                                   

consensus_11576#0      CGCAGCCTGAGAGGTCTATGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTA 1740
consensus_11576#1      ---------AGACAAGGGGGTACCGTGGTGGGGAGTTTGGATACACAAAACTTGTAGCTA 51
                                ***       *****************************************

consensus_11576#0      CAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGG 1800
consensus_11576#1      CAAAGGAGAAGTTGACACTAACGTACATCGGCAACCATGATGGGCAAGTCCATGATATGG 111
                       ************************************************************

consensus_11576#0      TGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATA 1860
consensus_11576#1      TGGAGATATTCTCTGGGCAAGTATCTAATAACAATGGTGTTCCTGAGGTGATCGATGATA 171
                       ************************************************************

consensus_11576#0      CAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTG 1920
consensus_11576#1      CAAAGCTCAGCACAGGGGTCAGCACCAAACTGAAAATCCCTCTGTTCTCCTTGGAAATTG 231
                       ************************************************************

consensus_11576#0      TAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTCTGATCAGAAGGA 1980
consensus_11576#1      TAGGCAGCGTGATGTTTGCACTGGTTCTGGGTTTCTCTCTTGGATTTNTGATCAGAAGGA 291
                       *********************************************** ************

consensus_11576#0      AGAAAGAAGCTGCACAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACACACTGT 2040
consensus_11576#1      AGAAAGAAGCTGCCCAGTGGACCCCAGTGAAGAACGAGGAGACCTAAAATCACCCCCTGT 351
                       ************* *************************************** * ****

consensus_11576#0      ATCTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATT 2100
consensus_11576#1      ATTTAATGCAAATGCAAATGGTTTTTGATCAACAACCTGTTTATAGGATCGTGCCCCATT 411
                       ** *********************************************************

consensus_11576#0      TCTTGGGGCTCTACAGTGTTGTACTATAGTGCATAGAGTATTGTAACATGTGCTGTGTCA 2160
consensus_11576#1      TNTTGGGGCTNTACAGTGTTGTACTATAGTGCATANAGTATTGTAACATGTGCTGTGTCA 471
                       * ******** ************************ ************************

consensus_11576#0      ATCGTGGGCATTGTAGAGTTTGATCAGCATATCTGTTGCCGTGATTCTACGATACATAAA 2220
consensus_11576#1      ATCGTGGGCATTGTANAGTTTGATCAGCATATNTGTTGCCGTGATTTTNCGATACATAAA 531
                       *************** **************** ************* * ***********

consensus_11576#0      GGTTTCAATAAGTGACATTACGTTCACATCAATTGGTTGGTATGA------ 2265
consensus_11576#1      GGTTTCAATAAGTGACATTACGTTCCCCTCNAAAAAAAAAAAAAAAAAAAA 582
                       ************************* * ** *         *  *      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)