These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11668#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1110 fasta sequence [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG-CTACGCCGGCGGGT-CCAAGG-CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA-TTCAGTACAAGAAACTTCTAGA-GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT-CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT-CTTAGC-AAAGA-AAAAGAACAAGCTAAGGATC-GCCGCAGTGTCATTACCACAC-AGATCCAACC-AATAGGTGCATTTTAT-CCGGCTGAACCGGAACATC-AGAAATTTGAGCT-GAAGC-GCAAGCCGTT-T-CTC-CTGC-AACTGATT-GGGAAC-CTGCC-CGAGGAGGAGCTCCTGACCTC-AACACT-AGCTGCAAAGTTGAAT-GCATACGCTGCT-GAGCTCT-GCTCCCC-AAATACCC-AGAAC-AGAAT-AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT-CCTCCTCTGCTCA-TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGATGTGGATTCATTACATTCTTAATCAAAAAC] [+] EMBL AU161223 [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTACGCC GCGGGT CCAAAG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAA GTTGAATATGATCCCCGGTTGA TTCA TACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATC ] [+] EMBL AU161216 [TCGGATCCCCCACCGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAG CGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTAC NCGGCGGGT CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGNCGAGTGCGTCAAGGTTGAATATAATNCCCGGTTGATTTCAGTACAAGAAACTTCTAGAGGGTCTTCTTGGAAAGTna ] [+] EMBL AK069328 [ CGGCGAGATGGCACGCGGATCCGCCGCCGCGGCGATCGCCGGAGTTGTGTGGGTGCTTCTCCTCCTCGTGGGGGTGGCGTCGGGGGCGCGTCTTCCGGGCGGGAGCGGGGGTAACCGGGGGCGGGAGCCGCGCGGGGGAGCGGCGGCGGCGGCGGTGGCCACGGAGACGGCGGTGTTCGCGCTGGGAAGCTTCTGGAGGTCGGAGGCCGCGTTCGGGTGCCTCCCCGGCGTGATCCGCACCTCCGTCGG CTACGCCGGCGGGT CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATTGTATATTGTTACTCTGGCTCTTTTATGTGTAAAAATATATGATGTGGATTCATTACATTCTTAATCAAAAAC] [+] EMBL C97580 [ GGCTTGATCCGCACNTCC CGGTGTACGCCGGCGGTTCCCAAGGCCCCGCCCTGAGTACCGCAACNTCGGCGACCACGCCGAGTGCNTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAAaa ] [+] EMBL CB000430 [ CGCGATCCTCACCTCCGGCGG CTACGCCGGCGGGG CCAAGG CCCGCCCTGAGTACCGCAACCTCGGCGACCACGCCGAGTGCGTCAAGGTTGAATATGATCCCCGGTTGA TTCAGTACAAGAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGTCCCTCCTCTGCTCATTTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCT ] [+] EMBL AU161224 [ GAAACTTCTAGA GGTCTTCTGGGCAAGTCATGATCCACGAGAGGTCTTTGGGCAAGGACCAGATGTTGGCAACCAATACAGATCCAT CATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGT CTTAGC AAAGA AAAAGAACAAGCTAAGGATC GCCGCAGTGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAAaa ] [+] EMBL BI797270 [ GGGCAATTCATGATCCACGAGA GTCTTTGGGCAAGGACCAGATGTGGGCAACCAATACAGATCCATGCATCTTCACAAATGGATCCGTGGAAGCTAGATTGGCTGGTGCTTAGCAAAAGATAAAAGAACAAGCTAAGGATCAGCCGCAGTGTCATTACCACACAAGATCCAACCAAATAGGTGCATTTTATGCCGGCTGAACCGGAACATCAAGAAATTTGAGCTGGAAGCAGCAAGCCGTTGTGCTCACTGCAAACTGATTGGGGAACACTGCCACGAGGAGGAGCTCCTGACCTCAAACACTGAGCTGCCAAGTTGAATGGCATACGCTGCTGGAGCTCTGGCTCCCCAAAATACCCAAGAACAAGAATGAAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGGGCATGATTTTGCCGCAAAaaaaaaa ] [+] EMBL BE530943 [ TGTCATTACCACAC AGATCCAACC AATAGGTGCATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTG ] [+] EMBL CB684597 [ CC AATCTTTGAATTTTAT CCGGCTGAACCGGAACATC AGAAATTTGAGCT GAAGC GCAAGCCGTT T CTC CTGC AACTGATT GGGAAC CTGCC CGAGGAGGAGCTCCTGACCTC AACACT AGCTGCAAAGTTGAAT GCATACGCTGCT GAGCTCT GCTCCCC AAATACCC AGAAC AGAAT AAACTCCAAGATTGATGAGATTGCTAAGAAAGGATGGCCCATCCTAAGAGACATTTAGCTCGGTGTTCCTGGGTTTTACATATTAATATATCATTATCCAATTGTGCATGATTTTGCCGCAAATCTTGTCCAGATGACTGGTTGTGGTCATTCCTTGGTCGCAGCAATCACTAATTAGCGTTCATGT CCTCCTCTGCTCA TTTTGAGATCTCTCTAATAGAATCTGCATGTATATCCAAACTTTCGAGTTGTGTGATGTGACCTGAAATCCTGAATTTATGATTGGTTCTTACAGAACAGGTGCCGAAATT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||