These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11673#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3840 fasta sequence [CCTCCCGTCTCCTCGGCTCCTCGCCCACTTCGTCCGCCGCCTGCGCTGCGCCGAGACGCCGCCGATCCCCATCCCGCGAGCGGCGGGGCCGGCCTCCATCCCGTGACCGCGAGCAGGAGCGCCGGCGCGGGGCACGTGCTGCTGCTTCCACCAATATCATCGCCGGTGAGGGCACCCGATCTGGAAGCCTTTTTCTCTTTGCCCTAACCAATAGAAGTTCGTTTCCAAATCAAGATTTTGGGGGTTCAAGTAAACCCCCATGCCCAACGTAAGAACTTGTTAAGCCATAGGCTCTGGTTCCATATGAGAGAAGATCCATATGCTCTTTTGAGATAGTTTGGAAAATGGCATCAAAGAAAGTATAAGTGGGTTATGTCAAGAAGGCCTGTGATTTTCTAGAATCAATTTGGTGAGCCGAATGATGGAGTGCAACAAAGAAGAGGCCCTCAAGGCCAGGGATATTGCTGCAAAGAAGATGGAAAGCAAAGACTTTGTTGGTGCCAAAAGGATCGCGCTTAAAGCTCAAAGGATTTTTCCAGAGCTTGAGAACATATCCCAGATGTTAACTGTCTGTGAAGTACATTGTGCGGCAGAAGCAAAGATGAATGGACTATTGGACTTCTATGGAGTTCTCCAAGTGGATGTAATGGCGGATGAAGCAACCATTAAAAAGCAATTCCGCAAGCTTGCTTTTTCGCTTCACCCTGATAAAAACGGTTTCGCTGGCGCTGAAGCTGCTTTCAAATTAGTTGCAGAAGCTCAGTCAACATTGTCTGATCGAACAAAACGGCGTGCATATGACATCAAATGGAGAATTGCATCAAAGCAGGCTACGCAACCAAAGCAGGGTGCCCAACCAGCGCAGGCTGCCCAACCAAAACAGTGTACACAACCACCGCTGGCTACAAAACGAAATCAGAGTGCACAACCAACGCATAATACACAGCAGAGTGCACAGCCAAAGCAGAGTACACAACCGATGCAGGCTACTCAACCGAAGCATGCTACTGAACCAATGGAGAAAACAGATGCAAATAGAGCTAGTAATGCTAAGGAAGGATATGGATCATCA-GTTCGACCACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAAGGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGTAAGGCAGGGGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCTGGTAATAGGGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGATCGGCTAGGAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAGAGGCGAACCATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGATGATAATGTTGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACACAACCACCAGAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCACATGATACAAATGCTCAGAAGAAATCTGGCATTCCTGGGAACTTTTCCTATCCTGACCCAGAATTTTTTGACTTCGATAGGTGCAGGGATGTTAGTATGTTTGCAGTTGATCAGATCTGGGCACTTTATGATGACCGTGATGGCATGCCACGATATTATGCTCGTATAAGACGCATTGATACAACCAACTTCAGAGTTCAGTTCACTTGGCTGGAGCATGATGCAAAGAATGAGGAAGAGGACAAATGGACTGATGAAGAATTGCCTGTGGCTTGTGGGAACTTTTTCTTAGGAAAAACAGTGGTGTCACAAGATGCCCTCATGTTTTCTCATATTGTGTCATGGGTGAAAGGTAGAAAAAGGAGCTCATACGAAATATATCCTAGGAAGGGTGAGGTATGGGCTCTATATAAGGGTTGGAGTATGCAGTGGAGCTCAGATGCAGATAAGCATAGAGCCTATGAGTATGAAGCTGTGGAGATCTTGTCAAATTTCACAGTGGAAGCTGGTGCTGCTGTTGGCCCTTTGGTAAAGATTAAAGGTTTTGTGAGTCTCTTTGCAAAAGTAAAGGAGAAACCATCATTCGTTATACCACCAAGCGAAATGCTACGGTTCTCTCACAGTATCCCATTTTTTAGAACAAAGGGAGATGAGAAGGTAGGTGTTGCTGGTGGGTTTCTTGAACTAGATACTGCATCACTTCCTAGTAACTTGGACGTAGCCTTTCCATCGGTTACTCTTGATTCTTGCATGCCTGTCTGCAAGACAATGAACAGTGGATTTAATGATTTCACTGGATATGAGCAAGGTGCGCTGAAAGAAAATTTGATGAACGAAGGTAAACGTAAAGATCATTCCCTTGAACGAACCCCAGTGCATCAACAGAGTGCTGCCTATTCCTCCCCCAGTACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAGAATATCGATCATATAGTAAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTACTATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTGATACTTTCCTGTTCCGGAGCGGCCGCTGATTGGCAAATGTTGATGCTGACTGTCCTGGAGATAGTAAGGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAATGTTGAGGCCTC-TGTGCTCATTCAGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCATTTGGCATGTGATGCAGTGATTATCTGGTTGTCAATTTCTCTTGAGGCGTTGCCCTGAGAGCAAATGGGAAATGTCATGCATACTGCAATTTTTCTGGAGCCAAGCTTCTTTTCTGGCCAGTGGTGTCATGGGCCTGTGCTCAAAGAAGTATTGCAACCTGTAACATATAGGTTGCTTCTTGCTGTGCTTTAATATATTTGTGCCCTTTC] [+] EMBL AK102596 [CCTCCCGTCTCCTCGGCTCCTCGCCCACTTCGTCCGCCGCCTGCGCTGCGCCGAGACGCCGCCGATCCCCATCCCGCGAGCGGCGGGGCCGGCCTCCATCCCGTGACCGCGAGCAGGAGCGCCGGCGCGGGGCACGTGCTGCTGCTTCCACCAATATCATCGCCGGTGAGGGCACCCGATCTGGAAGCCTTTTTCTCTTTGCCCTAACCAATAGAAGTTCGTTTCCAAATCAAGATTTTGGGGGTTCAAGTAAACCCCCATGCCCAACGTAAGAACTTGTTAAGCCATAGGCTCTGGTTCCATATGAGAGAAGATCCATATGCTCTTTTGAGATAGTTTGGAAAATGGCATCAAAGAAAGTATAAGTGGGTTATGTCAAGAAGGCCTGTGATTTTCTAGAATCAATTTGGTGAGCCGAATGATGGAGTGCAACAAAGAAGAGGCCCTCAAGGCCAGGGATATTGCTGCAAAGAAGATGGAAAGCAAAGACTTTGTTGGTGCCAAAAGGATCGCGCTTAAAGCTCAAAGGATTTTTCCAGAGCTTGAGAACATATCCCAGATGTTAACTGTCTGTGAAGTACATTGTGCGGCAGAAGCAAAGATGAATGGACTATTGGACTTCTATGGAGTTCTCCAAGTGGATGTAATGGCGGATGAAGCAACCATTAAAAAGCAATTCCGCAAGCTTGCTTTTTCGCTTCACCCTGATAAAAACGGTTTCGCTGGCGCTGAAGCTGCTTTCAAATTAGTTGCAGAAGCTCAGTCAACATTGTCTGATCGAACAAAACGGCGTGCATATGACATCAAATGGAGAATTGCATCAAAGCAGGCTACGCAACCAAAGCAGGGTGCCCAACCAGCGCAGGCTGCCCAACCAAAACAGTGTACACAACCACCGCTGGCTACAAAACGAAATCAGAGTGCACAACCAACGCATAATACACAGCAGAGTGCACAGCCAAAGCAGAGTACACAACCGATGCAGGCTACTCAACCGAAGCATGCTACTGAACCAATGGAGAAAACAGATGCAAATAGAGCTAGTAATGCTAAGGAAGGATATGGATCATCA GTTCGACCACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAAGGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGTAAGGCAGGGGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCTGGTAATAGGGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGATCGGCTAGGAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAGAGGCGAACCATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGATGATAATGTTGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACACAACCACCAGAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCACATGATACAAATGCTCAGAAGAAATCTGGCATTCCTGGGAACTTTTCCTATCCTGACCCAGAATTTTTTGACTTCGATAGGTGCAGGGATGTTAGTATGTTTGCAGTTGATCAGATCTGGGCACTTTATGATGACCGTGATGGCATGCCACGATATTATGCTCGTATAAGACGCATTGATACAACCAACTTCAGAGTTCAGTTCACTTGGCTGGAGCATGATGCAAAGAATGAGGAAGAGGACAAATGGACTGATGAAGAATTGCCTGTGGCTTGTGGGAACTTTTTCTTAGGAAAAACAGTGGTGTCACAAGATGCCCTCATGTTTTCTCATATTGTGTCATGGGTGAAAGGTAGAAAAAGGAGCTCATACGAAATATATCCTAGGAAGGGTGAGGTATGGGCTCTATATAAGGGTTGGAGTATGCAGTGGAGCTCAGATGCAGATAAGCATAGAGCCTATGAGTATGAAGCTGTGGAGATCTTGTCAAATTTCACAGTGGAAGCTGGTGCTGCTGTTGGCCCTTTGGTAAAGATTAAAGGTTTTGTGAGTCTCTTTGCAAAAGTAAAGGAGAAACCATCATTCGTTATACCACCAAGCGAAATGCTACGGTTCTCTCACAGTATCCCATTTTTTAGAACAAAGGGAGATGAGAAGGTAGGTGTTGCTGGTGGGTTTCTTGAACTAGATACTGCATCACTTCCTAGTAACTTGGACGTAGCCTTTCCATCGGTTACTCTTGATTCTTGCATGCCTGTCTGCAAGACAATGAACAGTGGATTTAATGATTTCACTGGATATGAGCAAGGTGCGCTGAAAGAAAATTTGATGAACGAAGGTAAACGTAAAGATCATTCCCTTGAACGAACCCCAGTGCATCAACAGAGTGCTGCCTATTCCTCCCCCAGTACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAGAATATCGATCATATAGTAAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTACTATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTGATACTTTCCTGTTCCGGAGCGGCCGCTGATTGGCAAATGTTGATGCTGACTGTCCTGGAGATAGTAAGGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAATGTTGAGGCCTC TGTGCTCATTCAGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCATTTGGCATGTGATGCAGTGATTATCTGGTTGTCAATTTCTCTTGAGGCGTTGCCCTGAGAGCAAATGGGAAATGTCATGCATACTGCAATTTTTCTGGAGCCAAGCTTCTTTTCTGGCCAGTGGTGTCATGGGCCTGTGCTCAAAGAAGTATTGCAACCTGTAACATATAGGTTGCTTCTTGCTGTGCTTTAATATATTTGTGCCCTTTC] [+] EMBL CB645439 [ AAGGATATGGATCATCANGTTCGACCACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAAGGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGTAAGGCAGGGGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCTGGTAATAGGGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGATCGGCTAGGAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAGAGGCGAACCATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGATGATAATGTTGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACACAACCACCAGAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCACATGATACAAATGCTCAGAAGAAATCT ] [+] EMBL C26435 [ ACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGNAAAGGGGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGC AATGTTNGTAGTAAGGCAGGGGG AAGATGACATCGTGCCCT CTCCA ] [+] EMBL AU108099 [ ACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTACTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGCAGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGCAGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGCGAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAGTGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAAGGGGGACTTGAATTTTCAACACTGCA ] [+] EMBL AU108104 [ GCATCAACAGAGTGCTGCCTATTCCTCCCCCAGTACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAG ATATCGATCATATAGTAAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTACTATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTGATACTTTCC ] [+] EMBL AU108100 [ AGTAAGTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTACTATGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTGATACTTTC ] [-] EMBL CB645440 [ ATTCCTGTGAGCTGTGGGACTTTTAACATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACTTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTTTGTGGCTTTTATGAGCTGGATCCAGCTTTTGTTCCTGATACTTTCCTGTTCCGGAGCGGCCGTTGATTGGCAAATGTTGATGCTGACTGTCCTGGAGATAGTAAGGATCTGGTCTCTTGTATGCTCTTGTAGTAGGGTGTTCATACACCACGCAGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAATGTTGAGGCCTCGTGTGCTCATTCAGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCATTTGGCATGTGATGCAGTGATTATCTGGTTGTCAATTTCTCTTGAGGCGTTGCCCTGAGAGCAAATGGGGAATGTCATGCATACTGCAATTTTTCTGGAAACAAaaaaggg ] consensusID : consensus_11673#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence [GGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACCGCACTGAAGCTAGCACAAAACTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTTGATCCAGCTTCTGTTCCTGATACTTTCCTGTTCCGGAGTGGCCGCTGATTGGCAAATGTTGATGCCGACTGTCCTGGAGATAGTAATGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAAAAAAAAAAAAA] [-] EMBL CA763429 [GGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGTCTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGGGACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTTAGTAGAAACTAGCCAAGTTGGTTGGAAACGATACTTTGAAATTCATCCACAAGTAGGGGAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTGGGTTCCTTCCAGCAAGGATACTTTCGAGTACACAATTGGTGAAATTACTGACCGCACTGAAGCTAGCACAAAACTCTTACTTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTCTGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGACAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTTGATCCAGCTTCTGTTCCTGATACTTTCCTGTTCCGGAGTGGCCGCTGATTGGCAAATGTTGATGCCGACTGTCCTGGAGATAGTAATGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCTGTGGTGCAAACCAAACCATGCTATCTTTTCTAAAAAAAAAAAAA] consensusID : consensus_11673#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 245 fasta sequence [TTGGTCTCTTGTATGCTCTTCTAGTATGGTGTTCATACACCACGCAGCTCGTGGTGCAAACCAAACCATGCTATCTTCTTCTAATGTTGAGGCCTCTGTGCTCATTCAGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCACTTTGGCATGTGATGCAGTGATTATCTGGTTGTCAATTTCTCTTGAGGCGTTTGCCCTGAGAGCAAATGGGAAATGTCACTGCATACTGCTAAACAAAAA] [+] EMBL BI801966 [TTGGTCTCTTGTATGCTCTTCTAGTATGGTGTTCATACACCACGCAGCTCGTGGTGCAAACCAAACCATGCTATCTTCTTCTAATGTTGAGGCCTCTGTGCTCATTCAGTTAGTTATTAGGTTAAAATTGCATGTTGCATTGGCACTTTGGCATGTGATGCAGTGATTATCTGGTTGTCAATTTCTCTTGAGGCGTTTGCCCTGAGAGCAAATGGGAAATGTCACTGCATACTGCTAAACAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11673#0 CCTCCCGTCTCCTCGGCTCCTCGCCCACTTCGTCCGCCGCCTGCGCTGCGCCGAGACGCC 60 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GCCGATCCCCATCCCGCGAGCGGCGGGGCCGGCCTCCATCCCGTGACCGCGAGCAGGAGC 120 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GCCGGCGCGGGGCACGTGCTGCTGCTTCCACCAATATCATCGCCGGTGAGGGCACCCGAT 180 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CTGGAAGCCTTTTTCTCTTTGCCCTAACCAATAGAAGTTCGTTTCCAAATCAAGATTTTG 240 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGGGTTCAAGTAAACCCCCATGCCCAACGTAAGAACTTGTTAAGCCATAGGCTCTGGTTC 300 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CATATGAGAGAAGATCCATATGCTCTTTTGAGATAGTTTGGAAAATGGCATCAAAGAAAG 360 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TATAAGTGGGTTATGTCAAGAAGGCCTGTGATTTTCTAGAATCAATTTGGTGAGCCGAAT 420 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GATGGAGTGCAACAAAGAAGAGGCCCTCAAGGCCAGGGATATTGCTGCAAAGAAGATGGA 480 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAGCAAAGACTTTGTTGGTGCCAAAAGGATCGCGCTTAAAGCTCAAAGGATTTTTCCAGA 540 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GCTTGAGAACATATCCCAGATGTTAACTGTCTGTGAAGTACATTGTGCGGCAGAAGCAAA 600 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GATGAATGGACTATTGGACTTCTATGGAGTTCTCCAAGTGGATGTAATGGCGGATGAAGC 660 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AACCATTAAAAAGCAATTCCGCAAGCTTGCTTTTTCGCTTCACCCTGATAAAAACGGTTT 720 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CGCTGGCGCTGAAGCTGCTTTCAAATTAGTTGCAGAAGCTCAGTCAACATTGTCTGATCG 780 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AACAAAACGGCGTGCATATGACATCAAATGGAGAATTGCATCAAAGCAGGCTACGCAACC 840 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAAGCAGGGTGCCCAACCAGCGCAGGCTGCCCAACCAAAACAGTGTACACAACCACCGCT 900 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGCTACAAAACGAAATCAGAGTGCACAACCAACGCATAATACACAGCAGAGTGCACAGCC 960 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAAGCAGAGTACACAACCGATGCAGGCTACTCAACCGAAGCATGCTACTGAACCAATGGA 1020 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GAAAACAGATGCAAATAGAGCTAGTAATGCTAAGGAAGGATATGGATCATCAGTTCGACC 1080 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ACCCAGTGCTGGAGAAGCATTCTGGACAATGTGTGTTAACTGTAAAACTAAATATCAGTA 1140 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CTACTCCAATGTTCTGAATCATAAACTCCGTTGTCAGAACTGCAAAAAAGATTTTCGAGC 1200 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AGTTATGCTAAATGAACAGGATGTGCCTTCTGTATTCTCATCAAGTGCAGCCAAAAGTGC 1260 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AGGACAACATTGTGACGTTCCCAAACAAGAGGACTGTTCTACGAAGTTCTCTTCTGCAGC 1320 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GAATAGAGATGCAAAGCCCATGGTGAATGGAGGACAACATGATGAACAAATGAAAAACAG 1380 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGCCAGTGTCAGAGCAGGTGGTGAGGGGACAGTTAACCATACAGAGTCAATCAGAAAAGG 1440 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGGACTTGAATTTTCAACACTGCATGTATCTTCTGCAGCAAATGTTGGTAGTAAGGCAGG 1500 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGGAAAGATGACATCGTGCCCTACTCCAGATGTTGCTGGTAGACAAAACCCTGGTAATAG 1560 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGTAAATACATCAGCAGAGACAGGTGTGATGAATATTCCTAATCCACGGAGATCGGCTAG 1620 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GAGGAAGGAAAATGCTGATGCCAGCATCATCCAGGATACGCCTAGCAAAAAGAGGCGAAC 1680 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CATATTAGATTGGTTTTCAAATCCTGACTCAAGTCGTAAGAAAGTGGCTGATGATAATGT 1740 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGTCCGTGCTGATGGACAAGCTTGTGAACCTCATGTCTCCAGCGAAGCACACAACCACCA 1800 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GAAAGGAACTACTAGCAATGAAGGAAACCAGGAAAAAAGGAAAGATGTTGCACATGATAC 1860 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAATGCTCAGAAGAAATCTGGCATTCCTGGGAACTTTTCCTATCCTGACCCAGAATTTTT 1920 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGACTTCGATAGGTGCAGGGATGTTAGTATGTTTGCAGTTGATCAGATCTGGGCACTTTA 1980 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGATGACCGTGATGGCATGCCACGATATTATGCTCGTATAAGACGCATTGATACAACCAA 2040 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CTTCAGAGTTCAGTTCACTTGGCTGGAGCATGATGCAAAGAATGAGGAAGAGGACAAATG 2100 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GACTGATGAAGAATTGCCTGTGGCTTGTGGGAACTTTTTCTTAGGAAAAACAGTGGTGTC 2160 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ACAAGATGCCCTCATGTTTTCTCATATTGTGTCATGGGTGAAAGGTAGAAAAAGGAGCTC 2220 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ATACGAAATATATCCTAGGAAGGGTGAGGTATGGGCTCTATATAAGGGTTGGAGTATGCA 2280 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GTGGAGCTCAGATGCAGATAAGCATAGAGCCTATGAGTATGAAGCTGTGGAGATCTTGTC 2340 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAATTTCACAGTGGAAGCTGGTGCTGCTGTTGGCCCTTTGGTAAAGATTAAAGGTTTTGT 2400 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GAGTCTCTTTGCAAAAGTAAAGGAGAAACCATCATTCGTTATACCACCAAGCGAAATGCT 2460 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ACGGTTCTCTCACAGTATCCCATTTTTTAGAACAAAGGGAGATGAGAAGGTAGGTGTTGC 2520 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGGTGGGTTTCTTGAACTAGATACTGCATCACTTCCTAGTAACTTGGACGTAGCCTTTCC 2580 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ATCGGTTACTCTTGATTCTTGCATGCCTGTCTGCAAGACAATGAACAGTGGATTTAATGA 2640 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TTTCACTGGATATGAGCAAGGTGCGCTGAAAGAAAATTTGATGAACGAAGGTAAACGTAA 2700 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AGATCATTCCCTTGAACGAACCCCAGTGCATCAACAGAGTGCTGCCTATTCCTCCCCCAG 2760 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TACTTTTGATTACCCAAACTCTGAATTTCATAACTTTGAAGAATATCGATCATATAGTAA 2820 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GTTTGAACGTGGCCAGATATGGGCTCTTTACAGTGATCTTGATCAATTTCCAAAGTACTA 2880 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGGTTGGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGT 2940 consensus_11673#1 -----GGGTGACCAAAGTTGATACAGATCCGTTCAGAGTGCATTTGACTTGGCTCGAAGT 55 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGG 3000 consensus_11673#1 CTGCCCTCAGCTGGAGCAGGAGAATATGTGGTTAGAGCAGAATATTCCTGTGAGCTGTGG 115 consensus_11673#2 -------------------------------TTGGTCTCTTGTATGCTCTTCTAGTATGG 29 ** * *** * * * *** consensus_11673#0 GACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTT 3060 consensus_11673#1 GACTTTTAAAATCCGCAACTGGAGGATAAAGTTAGACACGAATGATGCTTTCTCTCATTT 175 consensus_11673#2 TGTTCATACACCACGCAGCTCGTGGTGCAAACCAAAC-CATGCTAT-CTTCTTCTAATGT 87 * ** * **** ** * ** ** * ** * ** *** *** ** * consensus_11673#0 AGTAGAAACTA-GCCAAGTTGGTTGGAAACGATACTTTGAAATT-CATCCACAAGTAGGG 3118 consensus_11673#1 AGTAGAAACTA-GCCAAGTTGGTTGGAAACGATACTTTGAAATT-CATCCACAAGTAGGG 233 consensus_11673#2 TGAGGCCTCTGTGCTCATTCAGTTAGTTAT--TAGGTTAAAATTGCATGTT---GCATTG 142 * * ** ** * * *** * * ** ** ***** *** * * * consensus_11673#0 GAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTG--GGTTCCTTCCAGCAAGGATA 3176 consensus_11673#1 GAAATTTGGGCCATCTACAATAATTGGGCACCTGGTTG--GGTTCCTTCCAGCAAGGATA 291 consensus_11673#2 GCACTTTGG--CATGTGATGCAGT-GATTATCTGGTTGTCAATTTCTCTTGAGGCGTTTG 199 * * ***** *** * * * * * ******* ** ** * * consensus_11673#0 CTTTCGAGTACACAATTGGTGAAATTACTGACTGCACTGAAGCTAGCACAAAAGTCTTAC 3236 consensus_11673#1 CTTTCGAGTACACAATTGGTGAAATTACTGACCGCACTGAAGCTAGCACAAAACTCTTAC 351 consensus_11673#2 CCCT-GAGAGCA-AATGGGAAATGTCACTG--CATACT---GCTAA-ACAAAAA------ 245 * * *** ** *** ** * * **** *** **** ****** consensus_11673#0 TTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTC 3296 consensus_11673#1 TTTTGACCCGAGTAGATGGCTACAGAGCTGTGTTCAAGCCTGACAGTGTAAGGGGCACTC 411 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGA 3356 consensus_11673#1 TGGAGATACCTACAAATGAAAACATAAGGTTTTCTCACCTGATACCTTCTTTCCGGCTGA 471 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTGGATCCAGCTTCTGTTCCTG 3416 consensus_11673#1 CAAAAGAAAACGGTGGCAAACTCTGTGGCTTTTATGAGCTTGATCCAGCTTCTGTTCCTG 531 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ATACTTTCCTGTTCCGGAGCGGCCGCTGATTGGCAAATGTTGATGCTGACTGTCCTGGAG 3476 consensus_11673#1 ATACTTTCCTGTTCCGGAGTGGCCGCTGATTGGCAAATGTTGATGCCGACTGTCCTGGAG 591 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 ATAGTAAGGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCT 3536 consensus_11673#1 ATAGTAATGATCTGGTCTCTTGTATGCTCTTCTAGTAGGGTGTTCATACACCACGCAGCT 651 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GTGGTGCAAACCAAACCATGCTATCTTTTCTAATGTTGAGGCCTCTGTGCTCATTCAGTT 3596 consensus_11673#1 GTGGTGCAAACCAAACCATGCTATCTTTTCTAAAAAAAAAAAAA---------------- 695 consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AGTTATTAGGTTAAAATTGCATGTTGCATTGGCATTTGGCATGTGATGCAGTGATTATCT 3656 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 GGTTGTCAATTTCTCTTGAGGCGTTGCCCTGAGAGCAAATGGGAAATGTCATGCATACTG 3716 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 CAATTTTTCTGGAGCCAAGCTTCTTTTCTGGCCAGTGGTGTCATGGGCCTGTGCTCAAAG 3776 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 AAGTATTGCAACCTGTAACATATAGGTTGCTTCTTGCTGTGCTTTAATATATTTGTGCCC 3836 consensus_11673#1 ------------------------------------------------------------ consensus_11673#2 ------------------------------------------------------------ consensus_11673#0 TTTC 3840 consensus_11673#1 ---- consensus_11673#2 ---- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||