These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11698#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1574 fasta sequence [ACCACCTGCCGCCGGTGGTGCCGCCATCGTCGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAGATTGATCTGGTGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACCGGCAAAGGTGTCTCCTCCGCTCTTGCTCTCTCCAACGCCATCACAAATCTCGCAGCTTCGGTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTCTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCG-AAAAAATGGATTCTGCACCAGAAAGGCCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCT-GCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAGTTTCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTG-AAGAG-CGGGCGCAAACTGTCCTACTCATCC-TCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACAA-CAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCATATTTCACGGCCTCATTTTGGTTGGAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK100701 [ACCACCTGCCGCCGGTGGTGCCGCCATCGTCGAAGAACGTCCGTGACAGTGGACCGCCTTCAGAGATTGATCTGGTGAAGGAGAAGTTCGCCAAGCTGCTGCTCGGCGAGGACATGTCCGGCACCGGCAAAGGTGTCTCCTCCGCTCTTGCTCTCTCCAACGCCATCACAAATCTCGCAGCTTCGGTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTCTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCGAAAAAAATGGATTCTGCACCAGAAAGGCCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCT GCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAGTTTCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTG AAGAG CGGGCGCAAACTGTCCTACTCATCC TCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACAA CAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCATATTTCACGGCCTCA ] [+] EMBL C71724 [ AGCTTCGGTATTCGGGGAGCAGCGCCGGCTCGAGCCCATGTNTGCCGACCGGAGAGCTCGATGGAACAAGGAGATCGACTGGCTGCTGTCGGTCACCGACCACATCGTCGAGTTCGTCCCTTCGCAACAGGCGTCCACGGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTNCCAGATGCGTCG AAAAATGGATT TTCACCAGAAA GCCTTGTAGGGCA GTGCTTAAGGCAGCCATGGCTAT ] [+] EMBL C72108 [ GGATGGAACCAGCATGGAGGTGATGGGTACCCAGCAGCGCAGAGATCTTCTCATCAATATCCCGGCATTGCGAAAACTCGACGCCATGCTCCTTGAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGATCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCGTCG AAAAAATGGATTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATNCCGGGAGAGTACATTG AACTCTGGCCTAAG ATTGAAGG ] [+] EMBL C71796 [ nATGGGTACCCAGCAGCGCAGAGATCTTCTNATCAATATCCCGGCATTGCNAAAACTCGACGCCATGCTCCTTNAGTATCTTGACAATTTCAAAGATGAACAAGAATTCTGGTACGTAAAAAAAGACGCAGATGAGGGTGAAAAGGGCGATGCGCCAAGACAGGGCGACAAGTGGTGGTTCCCTACAGTTCGAGTCCCTCCCGAGGGTCTGCCAGATGCNTCG AAAAANTGGATTCTGCACCAGAAAGACCTTGTAGGGCAGGTGCTGAAGGCAGCCATGGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCT GCCTAAGANTGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGNTCCC ATGAGCTCTTAAG TCTGTAGACTTTTCGACAG ] [+] EMBL C72232 [ GGCTATCAATGCTGATGTTCTTACAGAGATGGAGATCCCGGGAGAGTACATTGAAACTCT GCCTAAGAATGGAAGGTCTAGTCTTGGAGACTCGATATACAAAATTATAACTGATGATCATTTCGATCCCAATGAGCTCTTAAGTTCTGTAGACTTGTCGACAGAGCACAAGATCGTCGATCTCAAAGACCGAATTGAGGCCTCCGTTGTAATTTGGCAGAGGAAAATTTCCAATAAGCTTTCCTGGGGCCCCGGTGTTAGCTTGGAGAAGCGAGAGCAGTTTG AAGAG CGGGCGCAAACTGTCCTACTCATCC TCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATNCAA CAAGGATGTTNGG ATTCCATCTTTGGGNGC ] [-] EMBL CA763431 [ TGTTAGCTTGGAGAAGCGAGAGCAG TTG AAGAG CGGGCACAAACTGTCCTACTCATCC TCAAGCACCAGTTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATTCAATACAA CAAGGATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCCCGAAATCAAGGAGAAGGCCCCGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACCCGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCCCCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGCGGGTTGAAAAGCTTTTTTTATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTTAAAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATTTCAGTTGAGATGAAATCAGTATGCATATTTCCCGGCCTCATTTTGGTTGGAAAAAAAAAAAAAAA ] [+] EMBL AU165527 [ AGANGCGAGACCA TTTGAAAGAG CGGGCGCAAACTGTCCTACTCATCC TC AGCACCA TTCCCTGGGGTTCCTCAGTCATCACTTGACATCAGCAAGATACAATACAA CAAGGATGTTGGGTATCCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATNCCATTGCTAGAGNCCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCANTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCAaaaa ] [+] EMBL AU101118 [ AACCGAGACCANTTTGAAAGAGCCGGGCGCAAATTGTCCTACTCATCCTTCAAGCACCAGTNCCTTGGGTTCCCTCAGTCATCACTTGACATCAGCAAGATACAATACAACCAAGGATGTTGGNTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCATATTTCACGGCCTCATTTTGGTTGGAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C98521 [ ATGTTGGGTATGCCATCTTGGAGAGCTACTCCAGGACTCTTGAGAGCTTAGCCTTTGCAGTTTTATCTCGGATCGAGGATGTTCTTCACGCTGATGCCATTGCTAGAGACCCAAAGCGCACGAAATCAAGGAGAAGGCCCAGTCTAGTTGACATCCCCGAGATCATTGACAATGCACTGGAGGAAGAGGAGACTGTGAACAGCATAGATGCCAATTCACAAGTGACCAACAACTCTATTCACTGGCAAGAGCAAGAACACGAGGACAAAGGCGCGAGGCTGAGGAAAGTCCACCGCATGGTCACAAAGAAACTTTTGCACATTGAGAAAGTTGATAATTTGGGGGGTGGGTTGAAAAGCTTTTCTCATAGGTAGCTGTAGCCTGAAAAAATGGTCAGACAGCTGCATGCTTGGTTGTGCTACCGGGGGGAGCACCTGTAAATAGCTCAAACTTCAGAGAGGCTGGATGGGTTGTATTGGCGATTTGGCGGTGTAATCTGCTCATCTCAGTTGAGATGAAATCAGTATGCAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||