These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11715#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1585 fasta sequence [GATTGACGCGAGCGAGGGACGACGACTCCGACGATCTTACTCCGGCGAGGCGAGACGACGGCGACTGCCGACCGGCGAGTTCGCTCCATCTTCCCCAGAGAACCCCCTCATTCTCCCTCCGGCGAGCTTTCTTCGACGGAGAAGACGAGACGCGGACGAGCGACCTCCCTCCGGCGACGACAACAGCCTACTCCGGCGAGCCCCCTCCTCCCTACGGTGAGTCCCCTTCTCCTCCCTCCGGTGAGCCGCTACCGCCTCGCCGCGCGCCCTTGTCCGCCGCCCACCGCCGGTCCGCCGCCTCCCAGACCATCCCTCTAAGCCCCGATCCCCCACTTCCCCCTCCCAAGCGCCACCCTCCCCCCACCCCCACATCCCCTTCGCACTCACGCGCAGCGCCCGTTGACCGCGCCGCTGTCAATTCGCCGCCCTCGGCTGTCGCGGGGTCGCGCGGTCGCGGGATCGCGCCACCGCCCTTGGCCGTCGCGGGGTCGAGCCGCTGCCGTCGGCCGTCGAGCTACCCCGAGAGGCCGAGAAACCCTAAGATATTAGGATGGATAAGGTGACTCAAGCTGTTGAGAACCTAAAGGAGGAATGGAATCAAGCTGTTGCACAGCTTGAAGGGTGCATTGCTGCAATTGAATCATGTGGGAAGATGGGAAAGGGGACAGAGGAAGCAAGTTCACTTCCTAGGTTAAACGGTTCTGCACAGGATGCACTGCAATTGCTCAATTCACTACAGTGCAGACTTGATCCTCTGGCAGAGCAGCTACCCACTTTTGAAGAAGTACAGTCTGGCCAAGCAACCCTGCAGTCATGGAAGGAACAGTATCAGAAGCTGCGCATGAGGCTGAGAAATGCTAACTTACAAGCAAATGCAAACATTAAAAAAGCTGCTCAAGAAGAGAGGGAGCTTCTTCTAGGGGGTGGAGAAGAATCTACCATCCGCAGGCGTAATCTACAGACAAAGGCTGGGATGACATCGGCTGCAGAAAGTATAACCGAGAGCCTCCGCCGATCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA-ACGGCA-AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCA-AAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAGCCCCTGCTGCTCCTGCTCCTGCTCCTCATATTTATGATGAACTATGATTTACTTTTGTGTATTGTTTGTACATGTAGATTCAGAAGAAAATATTCACCATCATTGTCAGTTTTATATAGTAAACTTTAAAAATTCTGATTAAGGTCTCTATTAACTTTTTTTTACCGAGGAAATGCAGGAGCTGTGTCATGTGTTTCAAGTAATATTTGCAAATGGAGGATATGATTGGG] [+] EMBL AK066526 [GATTGACGCGAGCGAGGGACGACGACTCCGACGATCTTACTCCGGCGAGGCGAGACGACGGCGACTGCCGACCGGCGAGTTCGCTCCATCTTCCCCAGAGAACCCCCTCATTCTCCCTCCGGCGAGCTTTCTTCGACGGAGAAGACGAGACGCGGACGAGCGACCTCCCTCCGGCGACGACAACAGCCTACTCCGGCGAGCCCCCTCCTCCCTACGGTGAGTCCCCTTCTCCTCCCTCCGGTGAGCCGCTACCGCCTCGCCGCGCGCCCTTGTCCGCCGCCCACCGCCGGTCCGCCGCCTCCCAGACCATCCCTCTAAGCCCCGATCCCCCACTTCCCCCTCCCAAGCGCCACCCTCCCCCCACCCCCACATCCCCTTCGCACTCACGCGCAGCGCCCGTTGACCGCGCCGCTGTCAATTCGCCGCCCTCGGCTGTCGCGGGGTCGCGCGGTCGCGGGATCGCGCCACCGCCCTTGGCCGTCGCGGGGTCGAGCCGCTGCCGTCGGCCGTCGAGCTACCCCGAGAGGCCGAGAAACCCTAAGATATTAGGATGGATAAGGTGACTCAAGCTGTTGAGAACCTAAAGGAGGAATGGAATCAAGCTGTTGCACAGCTTGAAGGGTGCATTGCTGCAATTGAATCATGTGGGAAGATGGGAAAGGGGACAGAGGAAGCAAGTTCACTTCCTAGGTTAAACGGTTCTGCACAGGATGCACTGCAATTGCTCAATTCACTACAGTGCAGACTTGATCCTCTGGCAGAGCAGCTACCCACTTTTGAAGAAGTACAGTCTGGCCAAGCAACCCTGCAGTCATGGAAGGAACAGTATCAGAAGCTGCGCATGAGGCTGAGAAATGCTAACTTACAAGCAAATGCAAACATTAAAAAAGCTGCTCAAGAAGAGAGGGAGCTTCTTCTAGGGGGTGGAGAAGAATCTACCATCCGCAGGCGTAATCTACAGACAAAGGCTGGGATGACATCGGCTGCAGAAAGTATAACCGAGAGCCTCCGCCGATCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA ACGGCA AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCA AAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAG ] [+] EMBL CB645499 [ ACGCGAGCTAGGGACGACGACTCCGACGATCTTACTCCGGCGAGGCGAGACGACGGCGACTGCCGACCGGCGAGTTCGCTCCATCTTCCCCAGAGAACCCCCTCATTCTCCCTCCGGCGAGCTTTCTTCGACGGAGAAGACGAGACGCGGACGAGCGACCTCCCTCCGGCGACGACAACAGCCTACTCCGGCGAGCCCCCTCCTCCCTACGGTGAGTCCCCTTCTCCTCCCTCCGGTGAGCCGCTACCGCCTCGCCGCGCGCCCTTGTCCGCCGCCCACCGCCGGTCCGCCGCCTCCCAGACCATCCCTCTAAGCCCCGATCCCCCACTTCCCCCTCCCTAGCGCCACCCTCCCCCCACCCCCACATCCCCTTCGCGCTCACTCGCAGGGCCCGTTGGCCGCGCCGCTGTCTATTCGTCGCCGTCCGCTGTCGCG ] [+] EMBL CB679690 [ TCTTACTCCGGCGAGGCGAGACGACGGCGACTGCCGACCGGCGAGTTCGCTCCATCTTCCCCAGAGAACCCCCTCATTCTCCCTCCGGCGAGCTTTCTTCGACGGAGAAGACGAGACGCGGACGAGCGACCTCCCTCCGGCGACGACAACAGCCTACTCCGGCGAGCCCCCTCCTCCCTACGGTGAGTCCCCTTCTCCTCCCTCCGGTGAGCCGCTACCGCCTCGCCGCGCGCCCTTGTCCGCCGCCCACCGCCGGTCCGCCGCCTCCCAGACCATCCCTCTAAGCCCCGATCCCCCACTTCCCCCTCCCAAGCGCCACCCTCCCCCCACCCCCACATCCCCTTCGCACTCACGCGCAGCGCCCGTTGACCGCGCCGCTGTCAATTCGCCGCCCTCGGCTGTCGCGGGGTCGCGCGGTCGCGGGATCGCGCCACCGCCCTTGGCCGTCGCGGGGTCGAGCCGCTGCCGTCGGCCGTCGAGCTACCCCGAGAGGCCGAGAAACCCTAAGATATTAGGATGGATAAGGTGACTCAAGCTGTTGAGAACCTAGAGGAGGAATGGAATCAAGCTGTTGCACAGCTTGAAGGGTGCATTGCTGCAATTGAATCATGTGGGAAGATGGGAAAGGGGACAGAGGAAGCA ] [-] EMBL CB645500 [ caGTGGGAAGAT GGAAAGGGGACAGAGGAAGCAAGTTCACTTCCTAGGTTAAACGGTTCTGCACAGGATGCACTGCAATTGCTCAATTCACTACAGTGCAGACTTGATCCTCTGGCAGAGCAGCTACCCACTTTTGAAGAAGTACAGTCTGGCCAAGCAACCCTGCAGTCATGGAAGGAACAGTATCAGAAGCTGCGCATGAGGCTGAGAAATGCTAACTTACAAGCAAATGCAAACATTAAAAAAGCTGCTCAAGAAGAGAGGGAGCTTCTTCTAGGGGGTGGAGAAGAATCTACCATCCGCAGGCGTAATCTACAGACAAAGGCTGGGATGACATCGGCTGCAGAAAGTATAACCGAGAGCCTCCGCCGATCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA ACGGCA AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCA AAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAGC ] [-] EMBL CB679691 [ TGATCCTCTGGCAGAGCAGCTACCCACTTTTGAAGAAGTACAGTCTGGCCAAGCAACCCTGCAGTCATGGAAGGAACAGTATCAGAAGCTGCGCATGAGGCTGAGAAATGCTAACTTACAAGCAAATGCAAACATTAAAAAAGCTGCTCAAGAAGAGAGGGAGCTTCTTCTAGGGGGTGGAGAAGAATCTACCATCCGCAGGCGTAATCTACAGACAAAGGCTGGGATGACATCGGCTGCAGAAAGTATAACCGAGAGCCTCCGCCGATCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA ACGGCA AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAAACGTATTTCCCTGTTGCCACTGCA AAGGAAGGTGCCCGATGCCATCAGATCAGGCTCAATATCAGCTGATCACGTTGTAGCAAAAATCAAGAATGTCCCTGTCCacaac ] [+] EMBL CB667957 [ GAAG ACTACAGTCTGGCCAAGCAACCCTGCAGTCATGGAAGGAACAGTATCAGAAGCTGCGCATGAGGCTGAGAAATGCTAACTTACAAGCAAATGCAAACATTAAAAAAGCTGCTCAAGAAGAGAGGGAGCTTCTTCTAGGGGGTGGAGAAGAATCTACCATCCGCAGGCGTAATCTACAGACAAAGGCTGGGATGACATCGGCTGCAGAAAGTATAACCGAGAGCCTCCGCCGATCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA ACGGCA AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCA AAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAG ] [+] EMBL CA765958 [ AGTATAACCGAGAGCCTCCGCCGGTCTCGCCAGTTGATGGTCCAGGAAGTGGAAAGAAGTGCAAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGACACCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTACAATGCA ACGGCA AGATGTTCTTGATAGGATCATCCTTACCATTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCA AAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAGCACCTGCTGCTCCTGCTCCTGCTCCTCATATTTATGATGAACTATGATTTACTTTTGTGTATTGTTTGTACATGTAGATTCAGAAGAAAATATTCACCATCATTGTCAGTTTTATATAGTAAACTTTAAAAATTCTGATTAAGGTCTCTATTAACTTTTTTTTACCGAGGAAATGCAGGAGCTGTGTCATGTGTTTCAAGTAATATTTGCAAATGGAGGATATGATTGGG] [+] EMBL BM420094 [ TCTCCCCA TTGATGGTCCAGGAAGTGGAAAGAAGT CCAATACCTTGGCAACATTTGATGAATCAACAAGTGTTCTTCGTAAGGCTGAAGGTGAATATCAAGGAC CCGCTCTTTGCTGATGCGTACTCGTGGTTTGCTATCTTCAATGCACACGGCACAGATGTTCTTGATAGGATCATCCTTACCCTTGGTTTTCTCATTTTCTCCTTGGCGGTGCTATATGTTGTCTCGAGACGTATTGGCCTGTTGACACTGCACAAGGAAGCTGGCCGATGCCATCAGATCAGGCTCAATATCAGCTGAAGACGTTGTAGCAAAAGTCAAGAATGTGCCTGTCCCAG ] [-] EMBL CB667958 [ GACCTATGATTTACTTTTGTGTATTGTTTGTACATGTAGATTCAGAAGAAAATATTCACCATCATTGTCAGTTTTATATAGTAAACTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||