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Oryza sativa
cluster # 11721 cluster # 11721       Sequences # 9       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11721#0 length = 1442 sequences # 5  
consensus_11721#1 length = 1306 sequences # 4  

consensusID : consensus_11721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1442
fasta sequence
                              [CAGAAAGGGAGGAGAGCCGTCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGG-AGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGTATTGTCCTTACTCCCAACCTCCTGCTCTCTCACTTTATCTTTTCTGTGTATTTGTGATACTAACAGAAATGATATCTAATGACTTTCTATGTTGTTTCAGGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCNCTCCAGCATAACGTGTTNTTCACTTTTTCGGGNGTGTTNTTCNCTTTTTTGTTAATCTGATCTTCTGCTTTCNCCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK072089             [CAGAAAGGGAGGAGAGCCGTCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGG AGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGTATTGTCCTTACTCCCAACCTCCTGCTCTCTCACTTTATCTTTTCTGTGTATTTGTGATACTAACAGAAATGATATCTAATGACTTTCTATGTTGTTTCAGGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTAC                                                                                                                                             ]
[+] EMBL CB655725             [  GAAAGGGAGGAGAGCCGTCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGG AGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTANGATCTGGGATTTTGATTGCTGTGCCGATTCCCAA GAACATGCAGCTTCAGGAAATGCTATAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF322695             [                   TCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGGNAGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C28115               [                      nCGCCGTGGGATGTCGNCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCG CGNAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGGGTTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGNGGCGGTTCCTGNCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU166936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGCCAATATTGCGC TGTAAAGACAAATGCTCTTG TGGTGCTAAAA TGCTG GGGCCTTTTTGATTTCCCCCAGAGAGTACCAAACAGATTTCGGAGGTTTGCCTTATAGAGTGCATGTCCAAAGGCAAGCGAGGTNTGAAACATGGGGCATCCTATTCATCCTCNCAATGTATGCTTGNACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTNTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCNCTCCAGCATAACGTGTTNTTCACTTTTTCGGGNGTGTTNTTCNCTTTTTTGTTAATCTGATCTTCTGCTTTCNCCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCAAAAAAAAAAAAAAAAAAA]


>consensus_11721#0 CAGAAAGGGAGGAGAGCCGTCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCA CGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCG CGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCC AGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAG CCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTG TAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTG GTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATAC CAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATAGAAATGGTGAACAGACCATGGACA TCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGA AATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTG CTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGC CATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTAC ATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAA ATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGTATTGTCCTTACTCCC AACCTCCTGCTCTCTCACTTTATCTTTTCTGTGTATTTGTGATACTAACAGAAATGATAT CTAATGACTTTCTATGTTGTTTCAGGGATAAAAATATAATAGGCAACGCGATCACTCCCT TCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGC TTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACC AGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCG AGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGG AAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCAT GATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCNCTCCAGCATAACG TGTTNTTCACTTTTTCGGGNGTGTTNTTCNCTTTTTTGTTAATCTGATCTTCTGCTTTCN CCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCAAAAAAAAAAAAAAAAA AA



consensusID : consensus_11721#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1306
fasta sequence
                              [CGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTGTTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACT-CCAGCATAACGTGTTCTTCACTTTTTCGGGCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGCTTTCACCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCCTATTTGGAGTGCAAAAAAAA]

[+] EMBL AK069190             [CGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTGTTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCA  ATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACT CCAGCATAATGTGTTCTTCACTTTTTCGGGCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGC                                                                     ]
[-] EMBL CB655726             [                                                                                                                                                                                                                                                                                                                                                                                                                          GGTGTTCATAGAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAAC TGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGAAATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACTCCCAGCATAAC                                                                                                                             ]
[-] EMBL CB967426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTCACCGGATGTAAGGTNCCATGTCGCGTTGATTCTCCCGAAGAGTGCGCCCAGATAATATATGCCAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGAGGATCTTCACTAGAAGCCCATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACCAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACCATGTATGCTTGTACAACTAGTCGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACT CCAGCATAACGTGTTCTTCACTTTTTCGGGCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGCT                                                                    ]
[+] EMBL BI811341             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGAAAGCCCTCAAGGAA CAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAAC AACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACT CCAGCATAACGTGTTCTTCACTTTTTCGGGCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGCTTTCACCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCCTATTTGGAGTGCAAAAAAAA]


>consensus_11721#1 CGCCGTCGTCGTCGTCGTCGAGCACGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGG AAGCGGCGCTGGCGCGCGGCGGCGCGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACG GTATGCCCTACCCGAAGAATCTCCAGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGA ACGGGGCGGTTCCTGCCACCATAGCCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCG GCGAGCAATTGAAGAGCTTGGCTGTAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGG ATATTGCACATGTTGTGGCCTCTGGTGGTAATGGTGCAACAACAGTTTCTGCCACTATGT TTTTCGCTCATAAGGTTGGCATACCAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATA GAAATGGTGAACAGACCATGGACATCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTG TCACTGTTATTTCAGCTGGTGTGAAATCTGTTTTGGACATACCACGGACACTTGAGTACT TGGAAACTCAAGGAGTAACGGTTGCTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTA CAGAAGTCAGCGGATGTAAGGTGCCATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGA TAATATATGCAAACAAGAATTTACATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTC CCAAGGAACATGCAGCTTCAGGAAATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGG AAGCAGAGGATAAAAATATAATAGGCAACGCGATCACTCCCTTCATGCTTGACAGAGTGA AAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGCTTGTAAAGAACAATGCTC TTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACCAGAGAGTAACAAACAGAT TTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCGAGGTCTGAAACATGGGGC ATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGGAAACTTGTAGCTTCATCC TTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCATGATTTGTAGCGAGATTTG CTACTGTAGACTTAAATTAGTACATTCCACTCCAGCATAACGTGTTCTTCACTTTTTCGG GCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGCTTTCACCTTGAAAACTTGAAATT AATTTGAACTGGGCATTCAGTCCTCCTATTTGGAGTGCAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11721#0      CAGAAAGGGAGGAGAGCCGTCGCCGCCGTGGGATGTCGCCGTCGTCGTCGTCGTCGAGCA 60
consensus_11721#1      ------------------------------------CGCCGTCGTCGTCGTCGTCGAGCA 24
                                                           ************************

consensus_11721#0      CGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCG 120
consensus_11721#1      CGGGGCCGATGGGGGTGGCGGTGTCGCCGGAGGTGGAAGCGGCGCTGGCGCGCGGCGGCG 84
                       ************************************************************

consensus_11721#0      CGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCC 180
consensus_11721#1      CGGTCGTCGCCCTCGAGTCCACCATCATCTGCCACGGTATGCCCTACCCGAAGAATCTCC 144
                       ************************************************************

consensus_11721#0      AGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAG 240
consensus_11721#1      AGACCGCCATGGAGGTGGAGGCCGTCGTGAGGGAGAACGGGGCGGTTCCTGCCACCATAG 204
                       ************************************************************

consensus_11721#0      CCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTG 300
consensus_11721#1      CCATTCTGAACGGCGTGCCACATGTTGGCCTTAGCGGCGAGCAATTGAAGAGCTTGGCTG 264
                       ************************************************************

consensus_11721#0      TAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTG 360
consensus_11721#1      TAAGTGGAAGACAGTTTCAGAAGACGGCTAGAAGGGATATTGCACATGTTGTGGCCTCTG 324
                       ************************************************************

consensus_11721#0      GTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATAC 420
consensus_11721#1      GTGGTAATGGTGCAACAACAGTTTCTGCCACTATGTTTTTCGCTCATAAGGTTGGCATAC 384
                       ************************************************************

consensus_11721#0      CAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATAGAAATGGTGAACAGACCATGGACA 480
consensus_11721#1      CAATTTTCGTAACTGGAGGGATTGGAGGTGTTCATAGAAATGGTGAACAGACCATGGACA 444
                       ************************************************************

consensus_11721#0      TCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGA 540
consensus_11721#1      TCTCCTCAGACTTAACTGAACTTGGAAAGACTCCTGTCACTGTTATTTCAGCTGGTGTGA 504
                       ************************************************************

consensus_11721#0      AATCTATTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTG 600
consensus_11721#1      AATCTGTTTTGGACATACCACGGACACTTGAGTACTTGGAAACTCAAGGAGTAACGGTTG 564
                       ***** ******************************************************

consensus_11721#0      CTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGC 660
consensus_11721#1      CTGCTTACAAAACCAATGAATTTCCTGCTTTCTTTACAGAAGTCAGCGGATGTAAGGTGC 624
                       ************************************************************

consensus_11721#0      CATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTAC 720
consensus_11721#1      CATGTCGCGTTGATTCTCCCGAAGAGTGTGCCAAGATAATATATGCAAACAAGAATTTAC 684
                       ************************************************************

consensus_11721#0      ATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAA 780
consensus_11721#1      ATCTAGGATCTGGGATTTTGATTGCTGTGCCGATTCCCAAGGAACATGCAGCTTCAGGAA 744
                       ************************************************************

consensus_11721#0      ATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAGTATTGTCCTTACTCCC 840
consensus_11721#1      ATGCTATAGAGTCTGCAATACAGAAAGCCCTCAAGGAAGCAGAG---------------- 788
                       ********************************************                

consensus_11721#0      AACCTCCTGCTCTCTCACTTTATCTTTTCTGTGTATTTGTGATACTAACAGAAATGATAT 900
consensus_11721#1      ------------------------------------------------------------
                                                                                   

consensus_11721#0      CTAATGACTTTCTATGTTGTTTCAGGGATAAAAATATAATAGGCAACGCGATCACTCCCT 960
consensus_11721#1      --------------------------GATAAAAATATAATAGGCAACGCGATCACTCCCT 822
                                                 **********************************

consensus_11721#0      TCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGC 1020
consensus_11721#1      TCATGCTTGACAGAGTGAAAGTACTAACTGGACGATCTTCGCTAGAAGCCAATATTGCGC 882
                       ************************************************************

consensus_11721#0      TTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACC 1080
consensus_11721#1      TTGTAAAGAACAATGCTCTTGTTGGTGCTAAAATTGCTGTGGCCCTTTCTGATCTTCACC 942
                       ************************************************************

consensus_11721#0      AGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCG 1140
consensus_11721#1      AGAGAGTAACAAACAGATTTCGGAGGTCTGCCTTATAGAGTGCATGTACAAAGGCAAGCG 1002
                       ************************************************************

consensus_11721#0      AGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGG 1200
consensus_11721#1      AGGTCTGAAACATGGGGCATCCTATTCATCCTCACAATGTATGCTTGTACAACTAGTTGG 1062
                       ************************************************************

consensus_11721#0      AAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCAT 1260
consensus_11721#1      AAACTTGTAGCTTCATCCTTTTCTGGCACTATATAAATGAAACCTGAGGTGCGAGTGCAT 1122
                       ************************************************************

consensus_11721#0      GATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCNCTCCAGCATAACG 1320
consensus_11721#1      GATTTGTAGCGAGATTTGCTACTGTAGACTTAAATTAGTACATTCCACTCCAGCATAACG 1182
                       ********************************************** *************

consensus_11721#0      TGTTNTTCACTTTTTCGGGNGTGTTNTTCNCTTTTTTGTTAATCTGATCTTCTGCTTTCN 1380
consensus_11721#1      TGTTCTTCACTTTTTCGGGCGTGTTCTTCACTTTTTTGTTAATCTGATCTTCTGCTTTCA 1242
                       **** ************** ***** *** ***************************** 

consensus_11721#0      CCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCAAAAAAAAAAAAAAAAA 1440
consensus_11721#1      CCTTGAAAACTTGAAATTAATTTGAACTGGGCATTCAGTCCTCCTATTTGGAGTGCAAAA 1302
                       *******************************************  *     *    ****

consensus_11721#0      AA-- 1442
consensus_11721#1      AAAA 1306
                       **  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)