These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11749#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1582 fasta sequence [CTGCTCCCTCCCTCCATCCCTTGCTCGCTCGCGCCACAACGTTATCCTCTCCTCGTAGATGTGGCCACAGTTTTTGCAGCCGGAACGAGCTGTCCAGGCTACTACTCCTACTAGCCATCTCCCACCCACTTATCACGAGGCTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATACCCTTTAGACAAAGTTGTTGTTGTTGTTTTTTTTTTTTAAATGATCGCTGGGTGATCCCTTATATCAGCTCTTTGTTCCTGCCACGCCATGCGTCATGTAATAATAACTGGGCGGAAAGAAATTCTT] [+] EMBL AK070660 [CTGCTCCCTCCCTCCATCCCTTGCTCGCTCGCGCCACAACGTTATCCTCTCCTCGTAGATGTGGCCACAGTTTTTGCAGCCGGAACGAGCTGTCCAGGCTACTACTCCTACTAGCCATCTCCCACCCACTTATCACGAGGCTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATACCCTTTAGACAAAGTTGTTGTTGTTGTTTTTTTTTTTTAAATGATCGCTGGGTGATCCCTTATATCAGCTCTTTGTTCCTGCCACGCCATGCGTCATGTAATAATAACTGGGCGGAAAGAAATTCTT] [+] EMBL AK060398 [ TCACGAGGCTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATA ] [+] EMBL CB663155 [ ACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACC ] [+] EMBL AU096344 [ nAAGATGCCTTTGCACNTACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTNCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACNACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGANAAAATCATGCAAGCTGGGNAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATACCCTTTAGACAAAaaaa ] consensusID : consensus_11749#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1557 fasta sequence [CTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACGTATCCTTTTCGGCTTATGTGAAACTGTTTTGTTCTTCGCTGTTTTTCTAATTTTACAATCTCTGCTACAAATCACTAGTTTCCCTACGCTACATTTTTTCTTTCCAGAAGTGGTGTGGATGCTTTTAACACCAATAATTTCGGGTAGCACATGTATAGCAGCAGAGTAACCCAATTTGCATCCAGATTCCAGAGTTCTCCTCAACATTTTGGTCAGATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGC] [+] EMBL AK106080 [CTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACGTATCCTTTTCGGCTTATGTGAAACTGTTTTGTTCTTCGCTGTTTTTCTAATTTTACAATCTCTGCTACAAATCACTAGTTTCCCTACGCTACATTTTTTCTTTCCAGAAGTGGTGTGGATGCTTTTAACACCAATAATTTCGGGTAGCACATGTATAGCAGCAGAGTAACCCAATTTGCATCCAGATTCCAGAGTTCTCCTCAACATTTTGGTCAGATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGC] [+] EMBL OSS12779A [ AACCCGCATNGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATNGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTNGTCCCCNGCG ] [+] EMBL OSS13545A [ ACCCGCATGGGCGCGCGCCAAGNAGGCGGGAGGAGTAGCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCNAGCACGCTCCATAGCCCTCTGCCATGGCGGCANTTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTGGTCCCCGGCGCACCG GCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTGGACTNGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGT GGCGGCGGTG CTTCNGAGCACGG TTTTTCCAG CCCAG CACAG ] [+] EMBL CB673119 [ ACCGCCACCCTCACCAGCAGCATCATGGTGCAGGTGAGCCGCCGCCGGCACCGCGAGCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGACCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGGATTGCCACCACTACGACGACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCAGCGGCGGGGCCTCCCGAGCACGGCTTGTCCCAGCCCCATCCACAAGCGCGGGCGGAGGGCTCGGACTATGCCGCCCTCGGCGACGCCAAGGACTCGCTCTACGCCGCTCTGGAAGGCATGAACAAAGGGATATTCGGGATGACCTCCGAGAAAAGGACAGAGATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCATGACAAGGAGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCTATACTGGGGAAGAAGAGGACAAAGTTGGGACTGACAGATTTCATCATCTTATGAGATTTCTTCCA ] consensusID : consensus_11749#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 747 fasta sequence [TTTTATACTGGCAAACCAAGTCAGTTTTGATTTTTGATATATCTTGAAATAAATGGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATAC] [-] EMBL CB673120 [TTTTATACTGGCAAACCAAGTCAGTTTTGATTTTTGATATATCTTGAAATAAATGGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGGCAAATGGCAATAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11749#1 ------------------------------------------------------------ consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 CTGCTCCCTCCCTCCATCCCTTGCTCGCTCGCGCCACAACGTTATCCTCTCCTCGTAGAT 60 consensus_11749#1 ------------------------------------------------------------ consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GTGGCCACAGTTTTTGCAGCCGGAACGAGCTGTCCAGGCTACTACTCCTACTAGCCATCT 120 consensus_11749#1 --------------------CTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTA 40 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 CCCACCCACTTATCACGAGGCTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTA 180 consensus_11749#1 GCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGA 100 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GCACACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGA 240 consensus_11749#1 GCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCC 160 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GCACGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCC 300 consensus_11749#1 CTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGAC 220 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 CTTCCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGAC 360 consensus_11749#1 GACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCC 280 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GACGAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCC 420 consensus_11749#1 ACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCC 340 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 ACGGCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCC 480 consensus_11749#1 ACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTA 400 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 ACAGGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTA 540 consensus_11749#1 CGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGA 460 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 CGCCGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGA 600 consensus_11749#1 GATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAA 520 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GATTCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAA 660 consensus_11749#1 GCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGG 580 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 GCTGCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGG 720 consensus_11749#1 GAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGAT 640 consensus_11749#2 ---------------TTTTATACTGGCAAACCAAGTCAGTTTTG---ATTTTTGATATAT 42 consensus_11749#0 GAAGAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGAT 780 ** **** * * **** ** * **** * * ** consensus_11749#1 GATTGATGTCAA-AGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAA 699 consensus_11749#2 C-TTGAAATAAATGGAGATTTAGCATCACCTTCTCTACACCCAAAGGAAAAGGCGGTAAA 101 consensus_11749#0 GATTGATGTCAA------------------------------AGAGGAAAAGGCGGTAAA 810 **** * ** * **************** consensus_11749#1 TGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGC 759 consensus_11749#2 TGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGC 161 consensus_11749#0 TGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACTATTGAAGC 870 ************************************************************ consensus_11749#1 TTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCAC 819 consensus_11749#2 TTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCAC 221 consensus_11749#0 TTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCGACCATCAC 930 ************************************************************ consensus_11749#1 TCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAA 879 consensus_11749#2 TCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAA 281 consensus_11749#0 TCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCTATATTCAA 990 ************************************************************ consensus_11749#1 CCCAGAAGGCTGGCTAGAGATAACGTATCCTTTTCGGCTTATGTGAAACTGTTTTGTTCT 939 consensus_11749#2 CCCAGAAGGCTGGCTAGAGATAAC------------------------------------ 305 consensus_11749#0 CCCAGAAGGCTGGCTAGAGATAAC------------------------------------ 1014 ************************ consensus_11749#1 TCGCTGTTTTTCTAATTTTACAATCTCTGCTACAAATCACTAGTTTCCCTACGCTACATT 999 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 ------------------------------------------------------------ consensus_11749#1 TTTTCTTTCCAGAAGTGGTGTGGATGCTTTTAACACCAATAATTTCGGGTAGCACATGTA 1059 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 ------------------------------------------------------------ consensus_11749#1 TAGCAGCAGAGTAACCCAATTTGCATCCAGATTCCAGAGTTCTCCTCAACATTTTGGTCA 1119 consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 ------------------------------------------------------------ consensus_11749#1 GATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGG 1179 consensus_11749#2 -ATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGG 364 consensus_11749#0 -ATACGTTGATGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGG 1073 *********************************************************** consensus_11749#1 AGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATAC 1239 consensus_11749#2 AGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATAC 424 consensus_11749#0 AGAGGGCAGACCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATAC 1133 ************************************************************ consensus_11749#1 ATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAA 1299 consensus_11749#2 ATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAA 484 consensus_11749#0 ATGGACATTCCGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAA 1193 ************************************************************ consensus_11749#1 CAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTT 1359 consensus_11749#2 CAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTT 544 consensus_11749#0 CAGCCAGTGCAGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTT 1253 ************************************************************ consensus_11749#1 TTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAA 1419 consensus_11749#2 TTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAA 604 consensus_11749#0 TTTTTTCTTTCTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAA 1313 ************************************************************ consensus_11749#1 GCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTT 1479 consensus_11749#2 GCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTT 664 consensus_11749#0 GCTCATGCAAGTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTT 1373 ************************************************************ consensus_11749#1 TGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTG 1539 consensus_11749#2 TGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTG 724 consensus_11749#0 TGAATTTTGAAATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTG 1433 ************************************************************ consensus_11749#1 TACAGCTTGGCAAATGGC------------------------------------------ 1557 consensus_11749#2 TACAGCTTGGCAAATGGCAATAC------------------------------------- 747 consensus_11749#0 TACAGCTTGGCAAATGGCAATACCCTTTAGACAAAGTTGTTGTTGTTGTTTTTTTTTTTT 1493 ****************** consensus_11749#1 ------------------------------------------------------------ consensus_11749#2 ------------------------------------------------------------ consensus_11749#0 AAATGATCGCTGGGTGATCCCTTATATCAGCTCTTTGTTCCTGCCACGCCATGCGTCATG 1553 consensus_11749#1 ----------------------------- consensus_11749#2 ----------------------------- consensus_11749#0 TAATAATAACTGGGCGGAAAGAAATTCTT 1582 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||