cluster # 1176

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Oryza sativa
cluster # 1176 cluster # 1176 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1176#0 length = 741 sequences # 2

consensusID : consensus_1176#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 741
fasta sequence

                              [GTCCGTACCANTTCTNAGTNGGCTGTTCGANGCCCNGGGAANGCCCCCGAGCNGNNNCCNGATCCTNTCCCCCNGCCGGCACGNGNGGCCCGCTCTNGCCGGCGATCAGCTCGAGCAGTCCGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTNCCCGAAGTTACGGATCCG-TTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGG-TGTTTCACCTTGGAGACCTGATGCGGTTATGAGTACAGACCGGGCGTGGACAGGTACTCGGTCCTCCGGATTTTCAAGGGCCAGCACAGGGGGCAGCACCAGGACACCGCAGCGACGTGCGGTGCTCTTCCAGGCCAGCTGGACCACTACCTCCGGCTGAACCAGTTTCCAGGGTTGGCAGGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGAGGCACCACCAGCACAGGCGTCTCCAGGACTTCCTAACGTCGCCAGTCAACCGCCACAGTCCCAGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCAGTGGTCGCAGCTCTCTGCCAGGGGTTACCCCAGTCCCATTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCCGG]

[+] EMBL AU163153             [GTCCGTACCANTTCTNAGTNGGCTGTTCGANGCCCNGGGAANGCCCCCGAGCNGNNNCCNGATCCTNTCCCCCNGCCGGCACGNGNGGCCCGCTCTNGCCGGCGATCAGCTCGAGCAGTCCGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCTTTNCCCGAAGTTACGGATCCG TTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGG TGTTTCACCTTGGAGACCTGATGCGGTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BI799371             [                                                                                                                                                                                  CTTTTCCCGAAGTTACGGATCCGTTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTG TTCACCTTGGAGACCTGATGCGGTTATGAGTACAGACCGGGCGTGGACAGGTACTCGGTCCTCCGGATTTTCAAGGGCCAGCACAGGGGGCAGCACCAGGACACCGCAGCGACGTGCGGTGCTCTTCCAGGCCAGCTGGACCACTACCTCCGGCTGAACCAGTTTCCAGGGTTGGCAGGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGAGGCACCACCAGCACAGGCGTCTCCAGGACTTCCTAACGTCGCCAGTCAACCGCCACAGTCCCAGGCTCGGGAAATCTTAACCCGATTCCCTTTCGGGGCACGCGCAGTGGTCGCAGCTCTCTGCCAGGGGTTACCCCAGTCCCATTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCCGG]




>consensus_1176#0
GTCCGTACCANTTCTNAGTNGGCTGTTCGANGCCCNGGGAANGCCCCCGAGCNGNNNCCN
GATCCTNTCCCCCNGCCGGCACGNGNGGCCCGCTCTNGCCGGCGATCAGCTCGAGCAGTC
CGCCGGCAGCCNACGGGTTCGGGGCCGGGACCCCCGAGCCCAGCCCTCAGAGCCAATCCT
TTNCCCGAAGTTACGGATCCGTTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCA
GAGGTGTTTCACCTTGGAGACCTGATGCGGTTATGAGTACAGACCGGGCGTGGACAGGTA
CTCGGTCCTCCGGATTTTCAAGGGCCAGCACAGGGGGCAGCACCAGGACACCGCAGCGAC
GTGCGGTGCTCTTCCAGGCCAGCTGGACCACTACCTCCGGCTGAACCAGTTTCCAGGGTT
GGCAGGGCCGTTAAGCAAGAAAAGATAACTCTTCCCGAGGCACCACCAGCACAGGCGTCT
CCAGGACTTCCTAACGTCGCCAGTCAACCGCCACAGTCCCAGGCTCGGGAAATCTTAACC
CGATTCCCTTTCGGGGCACGCGCAGTGGTCGCAGCTCTCTGCCAGGGGTTACCCCAGTCC
CATTAGGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCTCCTCTTCGG
CCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCT
CCGCCCGGGCTCGCGCCCCGG

clustalw multiple alignements is not computed in this case