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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11774#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1654 fasta sequence
[CTGTTCATATGGTTTTTTTAGCCTTTTTGTATTTCTTCGCATTGGTCGTGTAGATCCTGCCGTTCCGGAAGATCGGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGTGATCAAGGCAAGTCATATCTACCTTGAACATGTTGAATCCCATATTGTGAAAATTATGTTGTTTTACTTATATTGCATTGCTTTATAAATTATATCGTTCATTATTAATAATGTTTTATTAGTTATTCCTATGCTCTTGGTTATGGCCATGATGTTGATTTGATATCCATGATCTTTGTGAACCCTAGTAAAATTATAACTTGACTAGTCTAGTACCCTACATGATGGACTGACTAGTTGCTTTAGGTAAATGCTTAGTTATGCTTAGTTCCAACCTAGAACTTTTGGTTAAACTAGACTATGGTGGTTAACAACTAAAACTGGATTAGTTATGGACTATTGACGGGTTTGTCAATAGGTGGTGATAAAATGCTTTGTGCAACTAAAATATATTTTTGGGTTGGGCTCAGGGTCTAAGCTAGTTACTTTGGTAGTCGCACCCCGGCTAATATAAGGACCGGTCTTCGGGCCTCTATTGCAAGGCATCTTCGTGCAACCACAAGTCTAGTGGGTAAGGCCTGACTGGAAGTTTAGATCTTCTCAAAACAGAGACCATTGGTTGGAAGGGTGTGGAGCCAGGATTAAGGCCGTTTTTTCACTCGGCGCAAGGGGGGGCCTGTCTCATCCGGGGGATCCGACAACCTTTACCTTGTCGGGGACCAGCGGGCGGCGAAACCCCAGCAGGTTCTCCTATTTTGGGTAGACCTAGATGGATAGTCTTGTCACGACCTCT-ATCCGAGTACCGTGGTGGTACCC-GGCGCGTGGCAACGCGTGT-TGA-GGTTGTGTCTTGTGGG-TAAAGTTGTACACCTCTGATCAAAGTTAAAAACTATTCGAATAGCCGCGCCCTCGGTTATGGGCAAGCTGAGCAGTGTACCCAAAGTTAGTTCTGTTTTACAAAACCTTGGGTGGGTGAAATCATGATGGTGTAGTCATGTGGAGATTAAGGCAGGTTCGCAGGCTCATGCGACCTTGGTGATATTATAATATTGGCTTAGAATAGGATCGTGTTTTAAAATGTGCTTTAACCTGATTAAAATGTTTAAACTATGGCTTTATGCAAAATAAACCCTATTAGGCCATTTCCTTGTTTCTCCCTATGCATTATTGTTGCATTTCTGGTGTGACTTGCTGAGTACGGTGGTGGTACTCACTCTTGCTCACAAAAATAATCCAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTTGTAATAATCAACAATGTCTATGTGTACCTTGCCTCCTGGGACGAGGATTAATGCACT]
[+] EMBL AK106378 [CTGTTCATATGGTTTTTTTAGCCTTTTTGTATTTCTTCGCATTGGTCGTGTAGATCCTGCCGTTCCGGAAGATCGGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGTGATCAAGGCAAGTCATATCTACCTTGAACATGTTGAATCCCATATTGTGAAAATTATGTTGTTTTACTTATATTGCATTGCTTTATAAATTATATCGTTCATTATTAATAATGTTTTATTAGTTATTCCTATGCTCTTGGTTATGGCCATGATGTTGATTTGATATCCATGATCTTTGTGAACCCTAGTAAAATTATAACTTGACTAGTCTAGTACCCTACATGATGGACTGACTAGTTGCTTTAGGTAAATGCTTAGTTATGCTTAGTTCCAACCTAGAACTTTTGGTTAAACTAGACTATGGTGGTTAACAACTAAAACTGGATTAGTTATGGACTATTGACGGGTTTGTCAATAGGTGGTGATAAAATGCTTTGTGCAACTAAAATATATTTTTGGGTTGGGCTCAGGGTCTAAGCTAGTTACTTTGGTAGTCGCACCCCGGCTAATATAAGGACCGGTCTTCGGGCCTCTATTGCAAGGCATCTTCGTGCAACCACAAGTCTAGTGGGTAAGGCCTGACTGGAAGTTTAGATCTTCTCAAAACAGAGACCATTGGTTGGAAGGGTGTGGAGCCAGGATTAAGGCCGTTTTTTCACTCGGCGCAAGGGGGGGCCTGTCTCATCCGGGGGATCCGACAACCTTTACCTTGTCGGGGACCAGCGGGCGGCGAAACCCCAGCAGGTTCTCCTATTTTGGGTAGACCTAGATGGATAGTCTTGTCACGACCTCT ATCCGAGTACCGTGGTGGTACCC GGCGCGTGGCAACGCGTGT TGA GGTTGTGTCTTGTGGG TAAAGTTGTACACCTCTGATCAAAGTTAAAAACTATTCGAATAGCCGCGCCCTCGGTTATGGGCAAGCTGAGCAGTGTACCCAAAGTTAGTTCTGTTTTACAAAACCTTGGGTGGGTGAAATCATGATGGTGTAGTCATGTGGAGATTAAGGCAGGTTCGCAGGCTCATGCGACCTTGGTGATATTATAATATTGGCTTAGAATAGGATCGTGTTTTAAAATGTGCTTTAACCTGATTAAAATGTTTAAACTATGGCTTTATGCAAAATAAACCCTATTAGGCCATTTCCTTGTTTCTCCCTATGCATTATTGTTGCATTTCTGGTGTGACTTGCTGAGTACGGTGGTGGTACTCACTCTTGCTCACAAAAATAATCCAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTTGTAATAATCAACAATGTCTATGTGTACCTTGCCTCCTGGGACGAGGATTAATGCACT]
[+] EMBL CF322721 [ TGCAACTAAAATATATTTTTGGGTTGGGCTCAGGGTCTAAGCTAGTTACTTTGGTAGTCGCACCCCGGCTAATATAAGGACCGGTCTTCGGGCCTCTATTGCAAGGCATCTTCGTGCAACCACAAGTCTAGTGGGTAAGGCCTGACTGGAAGTTTAGATCTTCTCAAAACAGAGACCATTGGTTGGAAGGGTGTGGAGCCAGGATTAAGGCCGTTTTTTCACTCGGCGCAAGGGGGGGCCTGTCTCATCCGGGGGATCCGACAACCTTTACCTTGTCGGGGACCAGCGGGCGGCGAAACCCCAGCAGGTTCTCCTATTTTGGGTAGACCTAGATGGATAGTCTTGTCACGACCTCTNATCCGAGTACCGTGGTGGTACCCNGGCGCGTGGCAACGCGTGTNTGAGGGTTGTGTCTTGTGGGNTAAAGTTGTACACCTCTGATCAAAGTTAAAAACTATTCGAATAGCCGCGCCCTCGGTTATGGGCAAGCTGAGCAGTGTACCCAAAGTTAGTTCTGTTTTACAAAACCTTGGGTGGGTGAAATCATGATGGTGTAGTCA ]
consensusID : consensus_11774#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 926 fasta sequence
[CTCGTCATCCCTAACCTCCAGCCATCCTCTCTCTCTCCGGCCGAATTCCAAGCGACGGCAACCTCCGATTCGCCTCCTCCACTTGCCGTTTCATCAAATTAATTGAGGGGAATTAATTCCCACCTCATCCTCTCCAATTTCCCCATAATTTCCCACTCAATCCCGCATTATTCGTGGTGGATTTTGATGATGTTCTTTAATGGTGAGCTCCACCATGGCCGGCGTCGATCTCCCTACCCGGCGTCTCTCTCCCTCCCCTCCGGCCTATAAAAGGGACCCCCGACTCCCTCCTCTCTCCCCTCACACCGCCGCCCTCTCCCTCCTCTCTCCGCGGCCCACGTGCCGCTCTCTTCTTGTGCCGCCGCCGTCGCAACTCCGGCCGCCCCTCGCCGGTGGTCGGGACCTCATCGGAGCCCGGCGTCGCCACCATCCGCTTCGCCGCTTCCTCCTCTTCCCCGTCCACCCCTCCGTGGAGCATGACGACCGCGGGAACGACGACGACACCGACGACCCGAAGTTCCTCGCCGTTTCTTCCTCACTGCCGACAACACCGTCGATCTCTCGCCGCCGTGTCTGCTCGATCCTGCCGTTCCGGAAGATCGGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGTGATCAAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAG]
[+] EMBL AK069069 [CTCGTCATCCCTAACCTCCAGCCATCCTCTCTCTCTCCGGCCGAATTCCAAGCGACGGCAACCTCCGATTCGCCTCCTCCACTTGCCGTTTCATCAAATTAATTGAGGGGAATTAATTCCCACCTCATCCTCTCCAATTTCCCCATAATTTCCCACTCAATCCCGCATTATTCGTGGTGGATTTTGATGATGTTCTTTAATGGTGAGCTCCACCATGGCCGGCGTCGATCTCCCTACCCGGCGTCTCTCTCCCTCCCCTCCGGCCTATAAAAGGGACCCCCGACTCCCTCCTCTCTCCCCTCACACCGCCGCCCTCTCCCTCCTCTCTCCGCGGCCCACGTGCCGCTCTCTTCTTGTGCCGCCGCCGTCGCAACTCCGGCCGCCCCTCGCCGGTGGTCGGGACCTCATCGGAGCCCGGCGTCGCCACCATCCGCTTCGCCGCTTCCTCCTCTTCCCCGTCCACCCCTCCGTGGAGCATGACGACCGCGGGAACGACGACGACACCGACGACCCGAAGTTCCTCGCCGTTTCTTCCTCACTGCCGACAACACCGTCGATCTCTCGCCGCCGTGTCTGCTCGATCCTGCCGTTCCGGAAGATCGGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGTGATCAAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATAAAG]
[+] EMBL AU069287 [ CCGGCCGAATTCCAAGCGACGGCAACCTCCGATTCGCCTCCTCCACTTGCCGTTTCATCAAATTAATTGAGGGGAATTAATTCCCACCTCATCCTCTCCAATTCCCCCATAATTTCCCACTCAATCCCGCATTATTCGTGGTGGATTTTGATGATGTTCTTTAATGGTGAGCTCCACCATGGCCGGCGTCGATCTNCCTACCCGGCGTCTCTCTNCCTCCCCTCCAGCCTATAAAAGGGACCCCCGACTCCCTCCTCTCTCCCCTCACACCGCCGCCCTCTCCC ]
consensusID : consensus_11774#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 759 fasta sequence
[CGAGCTCTCTTTCTCTCTCTTTTGCCCTGTCCGGCCNTTAGTGCCACCGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGGAGAGAAAAAGAAAAGAGAAGAATCTCCCTGACAGAGTCTATTTTATTCTGGATGGCAACCTGTGGTATTTCGAGCGTCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGATCCTGTCGTTCCGGAAGATCAGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGCGATCAAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGNTCACTCCGNCGTCGAGTGCCTGTGGCTGCTGCTGNTCCGTAGTCTTCCGCTGGTTTATTTGTTTATCTTTGAGTGCGAAGGCTTGAGTCGTCCATGTAATAAAGTACTTNCTTTTACACTTNCGCAAGTGTGGC]
[+] EMBL CA766813 [CGAGCTCTCTTTCTCTCTCTTTTGCCCTGTCCGGCCNTTAGTGCCACCGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGGAGAGAAAAAGAAAAGAGAAGAATCTCCCTGACAGAGTCTATTTTATTCTGGATGGCAACCTGTGGTATTTCGAGCGTCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGATCCTGTCGTTCCGGAAGATCAGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGCGATCAAGAGGATGGACCTGAGGAAGATGAAGGCTTGGATCTCTAGNTCACTCCGNCGTCGAGTGCCTGTGGCTGCTGCTGNTCCGTAGTCTTCCGCTGGTTTATTTGTTTATCTTTGAGTGCGAAGGCTTGAGTCGTCCATGTAATAAAGTACTTNCTTTTACACTTNCGCAAGTGTGGC]
consensusID : consensus_11774#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 625 fasta sequence
[AAGGAGTAGAAAATACAACTCGAGCTCTCTTTCTCTCTCTTTTGCCATGTCCGGCCATTAGTGCCACCGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTC-TATTTNTATTCTGGATGGCAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGTAAGACTGAACGTCGCACTCAATCCCGCTTCACTGTTTGAAATCGGGAGTCGCGTCTGAGAGAGAGAGAAGC--ACGCTGCGGATTCTCCCCC]
[+] EMBL CF310727 [AAGGAGTAGAAAATACAACTCGAGCTCTCTTTCTCTCTCTTTTGCCATGTCCGGCCATTAGTGCCACCGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTC TATTTNTATTCTGGATGGCAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGTAAGACTGAACGTCGCACTCAATCCCGCTTCACTGTTTGAAATCGGGAGTCGCGTCTGAGAGAGAGAGAAGC ACGCTGCGGATTCTCCCCC]
[+] EMBL CF315688 [ GAGCTCTCTTTCTCTCTCTTTTGCCATGTCCGGCCATTAGTGCCACCGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCNTATTT TATTCTGGATGGCAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGACTGAACGTCGCACTCAATCCCGCTTCACTGTTTGAAATCGGGAGTCGCGTCTGAGAGAGAGAGAAGCAGAGGCTGCGGATTCTCCCC ]
consensusID : consensus_11774#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 533 fasta sequence
[CTCGTGCCGATTCGGCACGAGGGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCTATTTNTATTCTGGATGGCNAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGGCAAGTTATTATTCCTCTCCTTTGAGTATAATTATCCTAT]
[+] EMBL CF323860 [CTCGTGCCGATTCGGCACGAGGGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACGAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCTATTTNTATTCTGGATGGCNAACCTGTGGTATTTCGAGCATCGGATAATCAGGTTGCCTATCTTGGATTTATTTGCGTTGGAGCAAGGCAAGTTATTATTCCTCTCCTTTGAGTATAATTATCCTAT]
[+] EMBL CF322611 [CTCGTGCCGATTCGGCACGAGGGCTCGATCTCCCTCACCAGAGCTTCGCAAGCCAAACCCTCGCGCCATCGTGTTCGCCTCGACTAGATGATTCCATTTTTCCCCTTTCCCCTCTTTCCTATCCACTCCATCAAGCCACCATAACCACCTCCTTTGCAGCCGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCCTAACTCCTTCGCTGGGCGACCACTTCCCCGGGTGCGCGTTGTCCGGTAACACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTCTTTCTCTCTGCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAAGAGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCTATTT TATTCTGGATGGC AACCTGTGGTATTTCGAGCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 CTGTTCATATGGTTTTTTTAGCCTTTTTGTATTTCTTCGCATTGGTCGTGTAGATCCTGC 60
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 CGTTCCGGAAGATCGGCTCTTCATCGCCGTCGACGTCGAAGACTTTGTGAGTGATCAAGG 120
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 CAAGTCATATCTACCTTGAACATGTTGAATCCCATATTGTGAAAATTATGTTGTTTTACT 180
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 TATATTGCATTGCTTTATAAATTATATCGTTCATTATTAATAATGTTTTATTAGTTATTC 240
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 CTATGCTCTTGGTTATGGCCATGATGTTGATTTGATATCCATGATCTTTGTGAACCCTAG 300
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 TAAAATTATAACTTGACTAGTCTAGTACCCTACATGATGGACTGACTAGTTGCTTTAGGT 360
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 AAATGCTTAGTTATGCTTAGTTCCAACCTAGAACTTTTGGTTAAACTAGACTATGGTGGT 420
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 TAACAACTAAAACTGGATTAGTTATGGACTATTGACGGGTTTGTCAATAGGTGGTGATAA 480
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 AATGCTTTGTGCAACTAAAATATATTTTTGGGTTGGGCTCAGGGTCTAAGCTAGTTACTT 540
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 ------------------------------------------------------------
consensus_11774#0 TGGTAGTCGCACCCCGGCTAATATAAGGACCGGTCTTCGGGCCTCTATTGCAAGGCATCT 600
consensus_11774#3 ------------------------------AAGGAGTAGAAAATACAACTCGAGCTCTCT 30
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 --------------------------------------------------CGAGCTCTCT 10
consensus_11774#1 ----------------------------------CTCGTCATCCCTAACCTCCAGCCATC 26
consensus_11774#0 TCGTGCAACCACAAGTCTAGTGGGTAAGGCCTGACTGGAAGTTTAGATCTTCTCAAAACA 660
consensus_11774#3 TTCTCTCTCT-TTTGCCATGT-CCGGCCATTAGTG-CCACCGCTCGATCTCCCTCACCAG 87
consensus_11774#4 ----------------CTCGT-GCCGAT-TCGGCA-CGAGGGCTCGATCTCCCTCACCAG 41
consensus_11774#2 TTCTCTCTCT-TTTGCCCTGT-CCGGCCNTTAGTG-CCACCGCTCGATCTCCCTCACCAG 67
consensus_11774#1 CTCTCTCTCT-CCGGCCGAATTCCAAGCGACGGCAACCTCCGATTCGCCTCCTCCACTTG 85
consensus_11774#0 GAGACCATTGGTTGGAAGGGTGTGGAGCCAGGATTAAGGCCGTTTTTTCAC-TCGGCGCA 719
* * * * * *
consensus_11774#3 A-GCTTCGCAAGCCAAACCCTCGCGC---CATCGTGTTCGCCTCGACGA----GATGATT 139
consensus_11774#4 A-GCTTCGCAAGCCAAACCCTCGCGC---CATCGTGTTCGCCTCGACGA----GATGATT 93
consensus_11774#2 A-GCTTCGCAAGCCAAACCCTCGCGC---CATCGTGTTCGCCTCGACGA----GATGATT 119
consensus_11774#1 CCGTTTCATCAAATTAATTGAGGGGA---ATTAATTCCCACCTCATCCTCTCCAATTTCC 142
consensus_11774#0 AGGGGGGGCCTGTCTCATCCGGGGGATCCGACAACCTTTACCTTGTCGGGGACCAGCGGG 779
* * * * *** * *
consensus_11774#3 CCATTTTTCCCCTTTCCCCTCTTTCCTATCCAC--------TCCATC-AAGCCACC--AT 188
consensus_11774#4 CCATTTTTCCCCTTTCCCCTCTTTCCTATCCAC--------TCCATC-AAGCCACC--AT 142
consensus_11774#2 CCATTTTTCCCCTTTCCCCTCTTTCCTATCCAC--------TCCATC-AAGCCACC--AT 168
consensus_11774#1 CCATAATTTCCCACTCAATCCCGCATTATTCGTGGTGGATTTTGATG-ATGTTCTTTAAT 201
consensus_11774#0 CGGCGAAACCCCAGCAGGTTCTCCTATTTTGGG--TAGACCTAGATGGATAGTCTT--GT 835
* *** * * * * ** * *
consensus_11774#3 AACCACCTCCTTTGCAGC-CGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCC 247
consensus_11774#4 AACCACCTCCTTTGCAGC-CGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCC 201
consensus_11774#2 AACCACCTCCTTTGCAGC-CGAAGAGAAGCTCTTCTACTTGCCGTTCCGGCCTCCTCTCC 227
consensus_11774#1 GGTGAGCTCCACCATGGC-CGGCGTCGATCTCC-CTACCCGGCGTCTCTCTCCCTCCCCT 259
consensus_11774#0 CACGACCTCTATCCGAGTACCGTGGTGGTACCCGGCGCGTGGCAACGCG-TGTTGAGGTT 894
* *** * * * * * * * *
consensus_11774#3 TAACTCCTTCGCTGGG-----CGACCACTTCCCCGGGTGCG------CGTTGTCCGGTAA 296
consensus_11774#4 TAACTCCTTCGCTGGG-----CGACCACTTCCCCGGGTGCG------CGTTGTCCGGTAA 250
consensus_11774#2 TAACTCCTTCGCTGGG-----CGACCACTTCCCCGGGTGCG------CGTTGTCCGGTAA 276
consensus_11774#1 CCGGCCTATAAAAGGGACCCCCGACTCCCTCCTCTCTCCCCTCACACCGCCGCCCTCTCC 319
consensus_11774#0 GTGTCTTGTGGGTAAA------GTTGTACACCTCTGATCAA--AGTTAAAAACTATTCGA 946
* * ** *
consensus_11774#3 CACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTC 356
consensus_11774#4 CACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTC 310
consensus_11774#2 CACACTTGGCCGCCGCCGTCGAGGCCGTTCCACCATCGGAGCACCGGCGCCCCTTCTCTC 336
consensus_11774#1 CTCCTCTCTCCGCGGCCCACGTG-CCGCTCTCTTCTTGTGCCGCCGCCGTCGCAACTCCG 378
consensus_11774#0 ATAGCCGCGCCCTCGGTTATGGGCAAGCTGAGCAGTGTACCCAAAGTTAGTTCTGTTTTA 1006
** * * * * * * * * * *
consensus_11774#3 TTTCTCTCT-GCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAA 415
consensus_11774#4 TTTCTCTCT-GCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAA 369
consensus_11774#2 TTTCTCTCT-GCTGTTGCACGGGAAGAAGAAGAGAAGGAAGAAGAAGACGGGAGGAAGAA 395
consensus_11774#1 GCCGCCCCTCGCCGGTGGTCGGGACCTCATCGGAGCCCGGCGTCGCCACCATCCGCTTCG 438
consensus_11774#0 CAAAACCTTGGGTGGGTGAAATCATGATGGTGTAGTCATGTGGAGATTAAGGCAGGTTCG 1066
* * * * * * *
consensus_11774#3 G---AGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCTATTTNTATTCTGGATGGCA 472
consensus_11774#4 G---AGAAAAAGAAAAGAAAAGAATCTCCCTGACAGAGTCTATTTNTATTCTGGATGGCN 426
consensus_11774#2 GGAGAGAAAAAGAAAAGAGAAGAATCTCCCTGACAGAGTCTATTTT-ATTCTGGATGGCA 454
consensus_11774#1 CCGCTTCCTCCTCTTCCCCGTCCACCCCTCCG-TGGAGCATGACGACCGCGGGAACGACG 497
consensus_11774#0 CAGGCTCATGCGACCTTGGTGATATTATAATATTGGCTTAGAATAGGATCGTGTTTTAAA 1126
* * *
consensus_11774#3 A---CCTGTGGT--ATTTCGAG------CATCGGATAATCAG--GTTGCC-----TATC- 513
consensus_11774#4 AA--CCTGTGGT--ATTTCGAG------CATCGGATAATCAG--GTTGCC-----TATC- 468
consensus_11774#2 A---CCTGTGGT--ATTTCGAG------CGTCGGATAATCAG--GTTGCC-----TATC- 495
consensus_11774#1 ACG-ACACCGAC--GACCCGAAGTTCCTCGCCGTTTCTTCCTC-ACTGCCGACAACACC- 552
consensus_11774#0 ATGTGCTTTAACCTGATTAAAATGTTTAAACTATGGCTTTATGCAAAATAAACCCTATTA 1186
* * * * *
consensus_11774#3 -TTGGATTTATTTGCGTTGGA---GTAAGA-CTGAACGTCGC--ACTCAATCC-CGCTTC 565
consensus_11774#4 -TTGGATTTATTTGCGTTGGA---GCAAGG-CAAGTTATT---------ATTC-CTCTCC 513
consensus_11774#2 -TTGGATTTATTTGCGTTGGA---GCAAGATCCTGTCGTTCC--GGAAGATCAGCTCTTC 549
consensus_11774#1 -GTCGATCTCTCGCCGCCGTGTCTGCTCGATCCTGCCGTTCC--GGAAGATCGGCTCTTC 609
consensus_11774#0 GGCCATTTCCTTGTTTCTCCCTATGCATTATTGTTGCATTTCTGGTGTGACTTGCTGAGT 1246
* * * * * *
consensus_11774#3 ACTGT--TTGAAATCGGG---AGTCGCGTCTGAGAGAGAGAGAAGCACGCTGCGGATTCT 620
consensus_11774#4 TTTGA--GTATAATTA-------TCCTAT------------------------------- 533
consensus_11774#2 ATCGCCGTCGACGTCGAA---GACTTTGTGAGCGATCAAGAGGATGGACCTGAGGAAGAT 606
consensus_11774#1 ATCGCCGTCGACGTCGAA---GACTTTGTGAGTGATCAAGAGGATGGACCTGAGGAAGAT 666
consensus_11774#0 ACGGTGGTGGTACTCACTCTTGCTCACAAAAATAATCCAGAGGATGGACCTGAGGAAGAT 1306
* *
consensus_11774#3 CCCCC------------------------------------------------------- 625
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 GAAGGCTTGGATCTCTAGNTCACTCCGNCGTCGAGTGCCTGTGGCTGCTGCTGNTCCGTA 666
consensus_11774#1 GAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTA 726
consensus_11774#0 GAAGGCTTGGATCTCTAGTTCACTCCGCCGTCGAGTGCCTGTGGCTGCTGCTGTTCCGTA 1366
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 GTCTTCCGCTGGTTTATTTGTTTATCTTTGAGTGCGAAGGCTTGAGTCGTCCATGTAATA 726
consensus_11774#1 GTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATA 786
consensus_11774#0 GTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCTTGAGTCGTCCATGTAATA 1426
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 AAGTACTTNCTTTTACACTTNCGCAAGTGTGGC--------------------------- 759
consensus_11774#1 AAGTACTTCCTTT-ACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGT 845
consensus_11774#0 AAGTACTTCCTTT-ACACTTCCGCAAGTGTGGCTAGTTCACTCCGCCGTCGAGTGCCTGT 1485
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 GGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCT 905
consensus_11774#0 GGCTGCTGCTGTTCCGTAGTCTTCCGCTGTTTTATTTGTTTATCTTTGAGTGCGAGGGCT 1545
consensus_11774#3 ------------------------------------------------------------
consensus_11774#4 ------------------------------------------------------------
consensus_11774#2 ------------------------------------------------------------
consensus_11774#1 TGAGTCGTCCATGTAATAAAG--------------------------------------- 926
consensus_11774#0 TGAGTCGTCCATGTAATAAAGTACTTCCTTTACACTTCCGCAAGTGTGGCTTGTAATAAT 1605
consensus_11774#3 -------------------------------------------------
consensus_11774#4 -------------------------------------------------
consensus_11774#2 -------------------------------------------------
consensus_11774#1 -------------------------------------------------
consensus_11774#0 CAACAATGTCTATGTGTACCTTGCCTCCTGGGACGAGGATTAATGCACT 1654
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||